RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 AZIN1O14977 448 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 HTRA2O43464 458 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZNF623O75123 536 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 HTR1DP28221 377 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 CLRN1P58418 232 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZNF91Q05481 1191 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 IKZF1Q13422 519 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 RCAN2Q14206 197 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 ACVR1CQ8NER5 493 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 PDCD2LQ9BRP1 358 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 TXNIPQ9H3M7 391 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 AGO3Q9H9G7 860 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 PXDNLA1KZ92 1463 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 LINC00862A6NCI5 91 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 C17orf105B2RV13 164 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 UBL3O95164 117 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 IL4P05112 153 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 OR8G3PP0DMU2 310 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 GALR1P47211 349 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 FAM183BPQ6ZVS7 135 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 SYT9Q86SS6 491 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 LPGAT1Q92604 370 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 GATA6Q92908 595 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 NICN1Q9BSH3 213 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 GLRX2Q9NS18 164 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZDHHC3Q9NYG2 299 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 CACNA1IQ9P0X4 2223 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 FMO6PO60774 539 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 LGALS4P56470 323 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 MS4A2Q01362 244 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 SLC10A2Q12908 348 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 GRM3Q14832 879 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 ALKAL2Q6UX46 152 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 RGMAQ96B86 450 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 TIMD4Q96H15 378 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 GPX7Q96SL4 187 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 UQCC1Q9NVA1 299 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 MUTYHQ9UIF7 546 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 NKX6-3A6NJ46 265 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 DUXAA6NLW8 204 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 GPR182O15218 404 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 EIF4E2O60573 245 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 LSSP48449 732 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 LSM11P83369 360 aaKnown RBP eCLIP5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 MFAP5Q13361 173 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 FAM209AQ5JX71 171 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 OLIG3Q7RTU3 272 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 LRP10Q7Z4F1 713 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 IRF2BP1Q8IU81 584 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 OR2AJ1Q8NGZ0 328 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 OR8B2Q96RD0 313 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 RARRES2Q99969 163 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 TINAGQ9UJW2 476 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 AGPAT2O15120 278 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 BCHEP06276 602 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 RHOQP17081 205 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 EDNRAP25101 427 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 RPIAP49247 311 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 OLIG2Q13516 323 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 MELKQ14680 651 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 UBE2V2Q15819 145 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 CYBRD1Q53TN4 286 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 PRRT3Q5FWE3 981 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 TMEM150AQ86TG1 271 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 SIRT2Q8IXJ6 389 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 OR2T4Q8NH00 348 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 PDXPQ96GD0 296 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 NEU1Q99519 415 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 TMEM147Q9BVK8 224 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 CDC14AQ9UNH5 594 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 HPSEQ9Y251 543 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 A0A1W2PP11 408 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 POP4O95707 220 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 HGFP14210 728 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 MAS1LP35410 378 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 HHEXQ03014 270 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 SOX4Q06945 474 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 RNASEH2CQ8TDP1 164 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 AQP10Q96PS8 301 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 SERINC2Q96SA4 455 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 HOXD1Q9GZZ0 328 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 LHX6Q9UPM6 363 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZNF860A6NHJ4 632 aa5.59□□□□□ -1.52
CDC42BPA-201ENST00000334218 SLC22A31A6NKX4 558 aa5.59□□□□□ -1.52
CDC42BPA-201ENST00000334218 HMSDA8MTL9 139 aa5.59□□□□□ -1.52
CDC42BPA-201ENST00000334218 CAPN5O15484 640 aaPredicted RBP5.59□□□□□ -1.52
CDC42BPA-201ENST00000334218 FOXD2O60548 495 aaPredicted RBP5.59□□□□□ -1.52
CDC42BPA-201ENST00000334218 PTHP01270 115 aa5.59□□□□□ -1.52
CDC42BPA-201ENST00000334218 AMY2AP04746 511 aa5.59□□□□□ -1.52
CDC42BPA-201ENST00000334218 GDF1P27539 372 aa5.59□□□□□ -1.52
CDC42BPA-201ENST00000334218 CDKN2DP55273 166 aa5.59□□□□□ -1.52
CDC42BPA-201ENST00000334218 KLF1Q13351 362 aaPredicted RBP5.59□□□□□ -1.52
CDC42BPA-201ENST00000334218 CRB2Q5IJ48 1285 aa5.59□□□□□ -1.52
CDC42BPA-201ENST00000334218 DPY19L2P2Q6ZN68 376 aa5.59□□□□□ -1.52
CDC42BPA-201ENST00000334218 ZNF572Q7Z3I7 529 aaPredicted RBP5.59□□□□□ -1.52
CDC42BPA-201ENST00000334218 FAM71AQ8IYT1 594 aa5.59□□□□□ -1.52
CDC42BPA-201ENST00000334218 ANKRD9Q96BM1 317 aaPredicted RBP5.59□□□□□ -1.52
CDC42BPA-201ENST00000334218 LAMP3Q9UQV4 416 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms