RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 EMC7Q9NPA0 242 aa20.53■□□□□ 0.88
TSEN54-201ENST00000333213 ISYNA1Q9NPH2 558 aa20.53■□□□□ 0.88
TSEN54-201ENST00000333213 ACOXLQ9NUZ1 547 aa20.53■□□□□ 0.88
TSEN54-201ENST00000333213 DHHO43323 396 aa20.52■□□□□ 0.88
TSEN54-201ENST00000333213 MT-ND5P03915 603 aa20.52■□□□□ 0.88
TSEN54-201ENST00000333213 PSMA1P25786 263 aaKnown RBP20.52■□□□□ 0.88
TSEN54-201ENST00000333213 TPBGQ13641 420 aa20.52■□□□□ 0.88
TSEN54-201ENST00000333213 FAM180AQ6UWF9 173 aa20.52■□□□□ 0.88
TSEN54-201ENST00000333213 NUFIP2Q7Z417 695 aaKnown RBP20.52■□□□□ 0.88
TSEN54-201ENST00000333213 LINC00346Q8IVM7 164 aa20.52■□□□□ 0.88
TSEN54-201ENST00000333213 SYS1Q8N2H4 156 aa20.52■□□□□ 0.88
TSEN54-201ENST00000333213 KDF1Q8NAX2 398 aaPredicted RBP20.52■□□□□ 0.88
TSEN54-201ENST00000333213 CRLF2Q9HC73 371 aa20.52■□□□□ 0.88
TSEN54-201ENST00000333213 EMC3Q9P0I2 261 aa20.52■□□□□ 0.88
TSEN54-201ENST00000333213 MRM2Q9UI43 246 aaKnown RBP20.52■□□□□ 0.88
TSEN54-201ENST00000333213 STUB1Q9UNE7 303 aa20.52■□□□□ 0.88
TSEN54-201ENST00000333213 MRPL33O75394 65 aaKnown RBP20.51■□□□□ 0.87
TSEN54-201ENST00000333213 IGHV3-9P01782 118 aa20.51■□□□□ 0.87
TSEN54-201ENST00000333213 ACTA2P62736 377 aa20.51■□□□□ 0.87
TSEN54-201ENST00000333213 ACTG2P63267 376 aa20.51■□□□□ 0.87
TSEN54-201ENST00000333213 TEX30Q5JUR7 227 aa20.51■□□□□ 0.87
TSEN54-201ENST00000333213 TSPO2Q5TGU0 170 aa20.51■□□□□ 0.87
TSEN54-201ENST00000333213 CORO6Q6QEF8 472 aa20.51■□□□□ 0.87
TSEN54-201ENST00000333213 TRIB1Q96RU8 372 aa20.51■□□□□ 0.87
TSEN54-201ENST00000333213 MNTQ99583 582 aa20.51■□□□□ 0.87
TSEN54-201ENST00000333213 RBM24Q9BX46 236 aaKnown RBP20.51■□□□□ 0.87
TSEN54-201ENST00000333213 NDUFB11Q9NX14 153 aa20.51■□□□□ 0.87
TSEN54-201ENST00000333213 SF3B6Q9Y3B4 125 aaKnown RBP20.51■□□□□ 0.87
TSEN54-201ENST00000333213 IQCMA0A1B0GVH7 501 aa20.51■□□□□ 0.87
TSEN54-201ENST00000333213 ABHD16AO95870 558 aa20.51■□□□□ 0.87
TSEN54-201ENST00000333213 NR2C1P13056 603 aa20.51■□□□□ 0.87
TSEN54-201ENST00000333213 ZNF823P16415 610 aa20.51■□□□□ 0.87
TSEN54-201ENST00000333213 RORCP51449 518 aa20.51■□□□□ 0.87
TSEN54-201ENST00000333213 TDGF1P3P51864 188 aa20.51■□□□□ 0.87
TSEN54-201ENST00000333213 ZNF544Q6NX49 715 aa20.51■□□□□ 0.87
TSEN54-201ENST00000333213 FOXL2NBQ6ZUU3 175 aa20.51■□□□□ 0.87
TSEN54-201ENST00000333213 NABP1Q96AH0 204 aa20.51■□□□□ 0.87
TSEN54-201ENST00000333213 ABHD6Q9BV23 337 aa20.51■□□□□ 0.87
TSEN54-201ENST00000333213 CYB5R1Q9UHQ9 305 aa20.51■□□□□ 0.87
TSEN54-201ENST00000333213 GNG8Q9UK08 70 aa20.51■□□□□ 0.87
TSEN54-201ENST00000333213 TMEM14AQ9Y6G1 99 aa20.51■□□□□ 0.87
TSEN54-201ENST00000333213 FREM1Q5H8C1 2179 aa20.5■□□□□ 0.87
TSEN54-201ENST00000333213 MED12LQ86YW9 2145 aa20.5■□□□□ 0.87
TSEN54-201ENST00000333213 MAP1BP46821 2468 aaKnown RBP20.5■□□□□ 0.87
TSEN54-201ENST00000333213 OR8G3PP0DMU2 310 aa20.5■□□□□ 0.87
TSEN54-201ENST00000333213 CELP19835 753 aa20.5■□□□□ 0.87
TSEN54-201ENST00000333213 S100A1P23297 94 aa20.5■□□□□ 0.87
TSEN54-201ENST00000333213 TNFSF8P32971 234 aa20.5■□□□□ 0.87
TSEN54-201ENST00000333213 PRR30Q53SZ7 412 aaPredicted RBP20.5■□□□□ 0.87
TSEN54-201ENST00000333213 ST7LQ8TDW4 575 aa20.5■□□□□ 0.87
TSEN54-201ENST00000333213 SLC7A10Q9NS82 523 aa20.5■□□□□ 0.87
TSEN54-201ENST00000333213 SLCO1C1Q9NYB5 712 aa20.5■□□□□ 0.87
TSEN54-201ENST00000333213 LHFPL6Q9Y693 200 aa20.5■□□□□ 0.87
TSEN54-201ENST00000333213 CACNA1CQ13936 2221 aa20.5■□□□□ 0.87
TSEN54-201ENST00000333213 RGS13O14921 159 aa20.49■□□□□ 0.87
TSEN54-201ENST00000333213 AGTR1P30556 359 aa20.49■□□□□ 0.87
TSEN54-201ENST00000333213 EIF2B1Q14232 305 aaKnown RBP20.49■□□□□ 0.87
TSEN54-201ENST00000333213 KCNMB1Q16558 191 aa20.49■□□□□ 0.87
TSEN54-201ENST00000333213 SLC18B1Q6NT16 456 aa20.49■□□□□ 0.87
TSEN54-201ENST00000333213 DCXRQ7Z4W1 244 aa20.49■□□□□ 0.87
TSEN54-201ENST00000333213 SNRNP40Q96DI7 357 aaKnown RBP20.49■□□□□ 0.87
TSEN54-201ENST00000333213 TRMT61AQ96FX7 289 aaKnown RBP20.49■□□□□ 0.87
TSEN54-201ENST00000333213 SLCO5A1Q9H2Y9 848 aa20.49■□□□□ 0.87
TSEN54-201ENST00000333213 GTF3C1Q12789 2109 aa20.49■□□□□ 0.87
TSEN54-201ENST00000333213 CTDSP2O14595 271 aa20.49■□□□□ 0.87
TSEN54-201ENST00000333213 PSMB10P40306 273 aa20.49■□□□□ 0.87
TSEN54-201ENST00000333213 CRYBB2P43320 205 aa20.49■□□□□ 0.87
TSEN54-201ENST00000333213 BDH1Q02338 343 aa20.49■□□□□ 0.87
TSEN54-201ENST00000333213 EGR3Q06889 387 aa20.49■□□□□ 0.87
TSEN54-201ENST00000333213 ACSF3Q4G176 576 aaPredicted RBP20.49■□□□□ 0.87
TSEN54-201ENST00000333213 KRTCAP3Q53RY4 240 aa20.49■□□□□ 0.87
TSEN54-201ENST00000333213 RIPPLY2Q5TAB7 128 aa20.49■□□□□ 0.87
TSEN54-201ENST00000333213 MCEMP1Q8IX19 187 aa20.49■□□□□ 0.87
TSEN54-201ENST00000333213 GPR137CQ8N3F9 429 aa20.49■□□□□ 0.87
TSEN54-201ENST00000333213 UFD1Q92890 307 aa20.49■□□□□ 0.87
TSEN54-201ENST00000333213 MAP6Q96JE9 813 aa20.49■□□□□ 0.87
TSEN54-201ENST00000333213 TRIM36Q9NQ86 728 aa20.49■□□□□ 0.87
TSEN54-201ENST00000333213 ST6GALNAC2Q9UJ37 374 aa20.49■□□□□ 0.87
TSEN54-201ENST00000333213 POU2F3Q9UKI9 436 aa20.49■□□□□ 0.87
TSEN54-201ENST00000333213 AHRRA9YTQ3 701 aa20.48■□□□□ 0.87
TSEN54-201ENST00000333213 TRAPPC2P0DI81 140 aa20.48■□□□□ 0.87
TSEN54-201ENST00000333213 TRAPPC2BP0DI82 140 aa20.48■□□□□ 0.87
TSEN54-201ENST00000333213 FCGR2AP12318 317 aa20.48■□□□□ 0.87
TSEN54-201ENST00000333213 LIPNQ5VXI9 398 aa20.48■□□□□ 0.87
TSEN54-201ENST00000333213 ZNF585AQ6P3V2 769 aa20.48■□□□□ 0.87
TSEN54-201ENST00000333213 LRRN1Q6UXK5 716 aa20.48■□□□□ 0.87
TSEN54-201ENST00000333213 SPATC1Q76KD6 591 aa20.48■□□□□ 0.87
TSEN54-201ENST00000333213 C9orf106Q8NAJ2 232 aa20.48■□□□□ 0.87
TSEN54-201ENST00000333213 HSD17B8Q92506 261 aa20.48■□□□□ 0.87
TSEN54-201ENST00000333213 TMEM203Q969S6 136 aa20.48■□□□□ 0.87
TSEN54-201ENST00000333213 ZNF486Q96H40 463 aaPredicted RBP20.48■□□□□ 0.87
TSEN54-201ENST00000333213 OR8B4Q96RC9 309 aa20.48■□□□□ 0.87
TSEN54-201ENST00000333213 PARPBPQ9NWS1 579 aa20.48■□□□□ 0.87
TSEN54-201ENST00000333213 SSR3Q9UNL2 185 aa20.48■□□□□ 0.87
TSEN54-201ENST00000333213 TMEM8BA6NDV4 472 aa20.47■□□□□ 0.87
TSEN54-201ENST00000333213 IL1AP01583 271 aa20.47■□□□□ 0.87
TSEN54-201ENST00000333213 RPS19P39019 145 aaKnown RBP20.47■□□□□ 0.87
TSEN54-201ENST00000333213 RPS25P62851 125 aaKnown RBP20.47■□□□□ 0.87
TSEN54-201ENST00000333213 P4HA3Q7Z4N8 544 aa20.47■□□□□ 0.87
TSEN54-201ENST00000333213 GCNT2Q8N0V5 402 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms