RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 NR0B2Q15466 257 aa15.47■□□□□ 0.07
SCAMP4-201ENST00000316097 CCDC107Q8WV48 283 aa15.47■□□□□ 0.07
SCAMP4-201ENST00000316097 NKX3-1Q99801 234 aaPredicted RBP15.47■□□□□ 0.07
SCAMP4-201ENST00000316097 ULBP3Q9BZM4 244 aa15.47■□□□□ 0.07
SCAMP4-201ENST00000316097 OR10A5Q9H207 317 aa15.47■□□□□ 0.07
SCAMP4-201ENST00000316097 IKZF2Q9UKS7 526 aa15.47■□□□□ 0.07
SCAMP4-201ENST00000316097 FBXO4Q9UKT5 387 aa15.47■□□□□ 0.07
SCAMP4-201ENST00000316097 TTC28Q96AY4 2481 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 TRBV5-5A0A0J9YX44 114 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 PMS2P2O95744 297 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 ITGB2P05107 769 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 H2AFB1P0C5Y9 115 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 CSRP1P21291 193 aaKnown RBP15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 POU3F4P49335 361 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 PPIAP62937 165 aaKnown RBP15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 GUCA2BQ16661 112 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 CCDC157Q569K6 752 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 GLT8D1Q68CQ7 371 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 LDLRAD3Q86YD5 345 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 CBLN2Q8IUK8 224 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 CCDC36Q8IYA8 594 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 CLEC1AQ8NC01 280 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 OR1S2Q8NGQ3 325 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 PTPMT1Q8WUK0 201 aaPredicted RBP15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 ASB13Q8WXK3 278 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 VSTM2LQ96N03 204 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 PIGMQ9H3S5 423 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 ESRP2Q9H6T0 727 aaKnown RBP15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 SUSD2Q9UGT4 822 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 GPN3Q9UHW5 284 aaPredicted RBP15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 PCDHB10Q9UN67 800 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 ASCC3Q8N3C0 2202 aaKnown RBP15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 BCL2L11O43521 198 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 SLC25A12O75746 678 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 NKX2-2O95096 273 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 PSMD4P55036 377 aaKnown RBP15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 HSD17B7P56937 341 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 IGLV3-21P80748 117 aaPredicted RBP15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 SERTAD2Q14140 314 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 TAF13Q15543 124 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 TMEM71Q6P5X7 295 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 ZNF676Q8N7Q3 588 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 PDCD10Q9BUL8 212 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 DUSP23Q9BVJ7 150 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 OR8D2Q9GZM6 311 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 ASF1BQ9NVP2 202 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 CTSFQ9UBX1 484 aa15.46■□□□□ 0.07
SCAMP4-201ENST00000316097 CCSO14618 274 aa15.45■□□□□ 0.06
SCAMP4-201ENST00000316097 AK1P00568 194 aa15.45■□□□□ 0.06
SCAMP4-201ENST00000316097 CT45A8P0DMV1 189 aa15.45■□□□□ 0.06
SCAMP4-201ENST00000316097 CT45A9P0DMV2 189 aa15.45■□□□□ 0.06
SCAMP4-201ENST00000316097 CDKN2AP42771 156 aaKnown RBP15.45■□□□□ 0.06
SCAMP4-201ENST00000316097 CT45A2Q5DJT8 189 aa15.45■□□□□ 0.06
SCAMP4-201ENST00000316097 ULK3Q6PHR2 472 aa15.45■□□□□ 0.06
SCAMP4-201ENST00000316097 RAB11FIP2Q7L804 512 aa15.45■□□□□ 0.06
SCAMP4-201ENST00000316097 GABRG1Q8N1C3 465 aa15.45■□□□□ 0.06
SCAMP4-201ENST00000316097 OR1J2Q8NGS2 313 aa15.45■□□□□ 0.06
SCAMP4-201ENST00000316097 WNT2BQ93097 391 aa15.45■□□□□ 0.06
SCAMP4-201ENST00000316097 OR6C1Q96RD1 312 aa15.45■□□□□ 0.06
SCAMP4-201ENST00000316097 GAL3ST1Q99999 423 aa15.45■□□□□ 0.06
SCAMP4-201ENST00000316097 CHRNA10Q9GZZ6 450 aa15.45■□□□□ 0.06
SCAMP4-201ENST00000316097 C1orf198Q9H425 327 aa15.45■□□□□ 0.06
SCAMP4-201ENST00000316097 ZNF304Q9HCX3 659 aa15.45■□□□□ 0.06
SCAMP4-201ENST00000316097 TNFSF18Q9UNG2 199 aa15.45■□□□□ 0.06
SCAMP4-201ENST00000316097 M0QYG6 137 aa15.45■□□□□ 0.06
SCAMP4-201ENST00000316097 WNT11O96014 354 aa15.45■□□□□ 0.06
SCAMP4-201ENST00000316097 PVALBP20472 110 aaPredicted RBP15.45■□□□□ 0.06
SCAMP4-201ENST00000316097 BDKRB2P30411 391 aa15.45■□□□□ 0.06
SCAMP4-201ENST00000316097 CD96P40200 585 aa15.45■□□□□ 0.06
SCAMP4-201ENST00000316097 SNTB1Q13884 538 aaKnown RBP15.45■□□□□ 0.06
SCAMP4-201ENST00000316097 LINC00114Q6XXX2 140 aa15.45■□□□□ 0.06
SCAMP4-201ENST00000316097 ZNF417Q8TAU3 575 aa15.45■□□□□ 0.06
SCAMP4-201ENST00000316097 SEC22AQ96IW7 307 aa15.45■□□□□ 0.06
SCAMP4-201ENST00000316097 ALX4Q9H161 411 aaPredicted RBP15.45■□□□□ 0.06
SCAMP4-201ENST00000316097 UPB1Q9UBR1 384 aa15.45■□□□□ 0.06
SCAMP4-201ENST00000316097 TMEM218A2RU14 115 aa15.44■□□□□ 0.06
SCAMP4-201ENST00000316097 CDC14CA4D256 554 aa15.44■□□□□ 0.06
SCAMP4-201ENST00000316097 M0R296 226 aa15.44■□□□□ 0.06
SCAMP4-201ENST00000316097 OR2F2O95006 317 aa15.44■□□□□ 0.06
SCAMP4-201ENST00000316097 CD8AP01732 235 aa15.44■□□□□ 0.06
SCAMP4-201ENST00000316097 CLPSP04118 112 aa15.44■□□□□ 0.06
SCAMP4-201ENST00000316097 DLSTP36957 453 aa15.44■□□□□ 0.06
SCAMP4-201ENST00000316097 RPS27P42677 84 aaKnown RBP15.44■□□□□ 0.06
SCAMP4-201ENST00000316097 RAB13P51153 203 aa15.44■□□□□ 0.06
SCAMP4-201ENST00000316097 OR2F1Q13607 317 aa15.44■□□□□ 0.06
SCAMP4-201ENST00000316097 PAN3Q58A45 887 aaKnown RBP15.44■□□□□ 0.06
SCAMP4-201ENST00000316097 ARHGAP40Q5TG30 622 aa15.44■□□□□ 0.06
SCAMP4-201ENST00000316097 C11orf87Q6NUJ2 197 aa15.44■□□□□ 0.06
SCAMP4-201ENST00000316097 SVBPQ8N300 66 aa15.44■□□□□ 0.06
SCAMP4-201ENST00000316097 OR5M8Q8NGP6 311 aa15.44■□□□□ 0.06
SCAMP4-201ENST00000316097 MNTQ99583 582 aa15.44■□□□□ 0.06
SCAMP4-201ENST00000316097 NRSN2Q9GZP1 204 aa15.44■□□□□ 0.06
SCAMP4-201ENST00000316097 COMMD9Q9P000 198 aa15.44■□□□□ 0.06
SCAMP4-201ENST00000316097 IGHV5-10-1A0A0J9YXX1 117 aa15.44■□□□□ 0.06
SCAMP4-201ENST00000316097 TVP23AA6NH52 213 aa15.44■□□□□ 0.06
SCAMP4-201ENST00000316097 ARPC3O15145 178 aa15.44■□□□□ 0.06
SCAMP4-201ENST00000316097 RAB3DO95716 219 aa15.44■□□□□ 0.06
SCAMP4-201ENST00000316097 LIPCP11150 499 aa15.44■□□□□ 0.06
SCAMP4-201ENST00000316097 ZNHIT3Q15649 155 aaPredicted RBP15.44■□□□□ 0.06
SCAMP4-201ENST00000316097 SLC16A9Q7RTY1 509 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms