RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 ANXA2P2A6NMY6 339 aa6.82□□□□□ -1.32
TRIM55-202ENST00000315962 ZNF814B7Z6K7 855 aa6.82□□□□□ -1.32
TRIM55-202ENST00000315962 C9J4A7 227 aa6.82□□□□□ -1.32
TRIM55-202ENST00000315962 EIF1AYO14602 144 aaKnown RBP6.82□□□□□ -1.32
TRIM55-202ENST00000315962 XKRYO14609 159 aa6.82□□□□□ -1.32
TRIM55-202ENST00000315962 PLPP2O43688 288 aa6.82□□□□□ -1.32
TRIM55-202ENST00000315962 CSN2P05814 226 aa6.82□□□□□ -1.32
TRIM55-202ENST00000315962 FGF5P12034 268 aa6.82□□□□□ -1.32
TRIM55-202ENST00000315962 ZNF35P13682 527 aa6.82□□□□□ -1.32
TRIM55-202ENST00000315962 CTLA4P16410 223 aa6.82□□□□□ -1.32
TRIM55-202ENST00000315962 NUP62P37198 522 aaPredicted RBP6.82□□□□□ -1.32
TRIM55-202ENST00000315962 TMEM176BQ3YBM2 270 aaPredicted RBP6.82□□□□□ -1.32
TRIM55-202ENST00000315962 CLLU1Q5K131 121 aa6.82□□□□□ -1.32
TRIM55-202ENST00000315962 FAM69AQ5T7M9 428 aa6.82□□□□□ -1.32
TRIM55-202ENST00000315962 LRRN1Q6UXK5 716 aa6.82□□□□□ -1.32
TRIM55-202ENST00000315962 C3P1Q6ZMU1 363 aa6.82□□□□□ -1.32
TRIM55-202ENST00000315962 BTN2A1Q7KYR7 527 aa6.82□□□□□ -1.32
TRIM55-202ENST00000315962 KCTD20Q7Z5Y7 419 aa6.82□□□□□ -1.32
TRIM55-202ENST00000315962 LURAP1LQ8IV03 231 aa6.82□□□□□ -1.32
TRIM55-202ENST00000315962 LINC00346Q8IVM7 164 aa6.82□□□□□ -1.32
TRIM55-202ENST00000315962 ZNF440Q8IYI8 595 aa6.82□□□□□ -1.32
TRIM55-202ENST00000315962 SYNPRQ8TBG9 265 aa6.82□□□□□ -1.32
TRIM55-202ENST00000315962 NARS2Q96I59 477 aaKnown RBP6.82□□□□□ -1.32
TRIM55-202ENST00000315962 OR5B2Q96R09 309 aa6.82□□□□□ -1.32
TRIM55-202ENST00000315962 ZMAT3Q9HA38 289 aaKnown RBP6.82□□□□□ -1.32
TRIM55-202ENST00000315962 KLHL13Q9P2N7 655 aa6.82□□□□□ -1.32
TRIM55-202ENST00000315962 GPR160Q9UJ42 338 aa6.82□□□□□ -1.32
TRIM55-202ENST00000315962 KCNG2Q9UJ96 466 aa6.82□□□□□ -1.32
TRIM55-202ENST00000315962 SCP2D1Q9UJQ7 156 aa6.82□□□□□ -1.32
TRIM55-202ENST00000315962 LHX6Q9UPM6 363 aa6.82□□□□□ -1.32
TRIM55-202ENST00000315962 MOKQ9UQ07 419 aa6.82□□□□□ -1.32
TRIM55-202ENST00000315962 HIF3AQ9Y2N7 669 aa6.82□□□□□ -1.32
TRIM55-202ENST00000315962 FKBP7Q9Y680 259 aa6.82□□□□□ -1.32
TRIM55-202ENST00000315962 IGHV1-45A0A0A0MS14 117 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 NSG1A0A0A6YYJ2 146 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 A0A0G2JMM0 328 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 A0A1W2PPB8 328 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 hCG_1807616A0A1W2PRN6 198 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 A0A1W2PRS3 328 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 KIR3DP1A8MWS1 328 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 PYCARD-AS1I3L0S3 204 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 TO15178 435 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 SPARCP09486 303 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 CFL1P23528 166 aaKnown RBP6.81□□□□□ -1.32
TRIM55-202ENST00000315962 DIO1P49895 249 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 DUSP3P51452 185 aaPredicted RBP6.81□□□□□ -1.32
TRIM55-202ENST00000315962 POLR2HP52434 150 aaKnown RBP6.81□□□□□ -1.32
TRIM55-202ENST00000315962 RPS11P62280 158 aaKnown RBP eCLIP6.81□□□□□ -1.32
TRIM55-202ENST00000315962 TAGLNQ01995 201 aaKnown RBP6.81□□□□□ -1.32
TRIM55-202ENST00000315962 C17orf67Q0P5P2 114 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 PCOLCEQ15113 449 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 HSD17B12Q53GQ0 312 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 DCAF12Q5T6F0 453 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 ATP1A1-AS1Q5TC04 95 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 LINC01590Q5TEZ4 76 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 DMKNQ6E0U4 476 aaPredicted RBP6.81□□□□□ -1.32
TRIM55-202ENST00000315962 C11orf88Q6PI97 169 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 GRINAQ7Z429 371 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 SLC51BQ86UW2 128 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 WDSUB1Q8N9V3 476 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 OR56B4Q8NH76 319 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 TMEM138Q9NPI0 162 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 PIPOXQ9P0Z9 390 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 PADI1Q9ULC6 663 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 TRAV36DV7A0A075B6V5 113 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 SLC22A23A1A5C7 686 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 A8MVM7 634 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 GOSR2O14653 212 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 ZFPL1O95159 310 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 AHSA1O95433 338 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 BGLAPP02818 100 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 COX6A1P12074 109 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 CD59P13987 128 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 PSMB1P20618 241 aaKnown RBP6.81□□□□□ -1.32
TRIM55-202ENST00000315962 DNASE1L1P49184 302 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 MMP15P51511 669 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 ZNF41P51814 821 aaPredicted RBP6.81□□□□□ -1.32
TRIM55-202ENST00000315962 SIRPAP78324 504 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 INSM1Q01101 510 aaPredicted RBP6.81□□□□□ -1.32
TRIM55-202ENST00000315962 TLE3Q04726 772 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 CHAF1BQ13112 559 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 MYBPHQ13203 477 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 RSPO4Q2I0M5 234 aaPredicted RBP6.81□□□□□ -1.32
TRIM55-202ENST00000315962 TMEM69Q5SWH9 247 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 LRRC75AQ8NAA5 344 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 OR5L2Q8NGL0 311 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 SMIM4Q8WVI0 70 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 CHST6Q9GZX3 395 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 COA3Q9Y2R0 106 aaPredicted RBP6.81□□□□□ -1.32
TRIM55-202ENST00000315962 NOSIPQ9Y314 301 aaKnown RBP6.81□□□□□ -1.32
TRIM55-202ENST00000315962 RALGAPA1Q6GYQ0 2036 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 ZZEF1O43149 2961 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 FREM3P0C091 2139 aa6.81□□□□□ -1.32
TRIM55-202ENST00000315962 OR6C76A6NM76 312 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 VSIG10L2P0DP72 767 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 PRKACAP17612 351 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 M6PRP20645 277 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 CDK2P24941 298 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 CDAP32320 146 aa6.8□□□□□ -1.32
TRIM55-202ENST00000315962 SLC6A8P48029 635 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms