RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 SAMD8Q96LT4 415 aa12.45□□□□□ -0.42
PPP1CA-201ENST00000312989 NMNAT3Q96T66 252 aa12.45□□□□□ -0.42
PPP1CA-201ENST00000312989 WACQ9BTA9 647 aa12.45□□□□□ -0.42
PPP1CA-201ENST00000312989 TRIM15Q9C019 465 aa12.45□□□□□ -0.42
PPP1CA-201ENST00000312989 MUC13Q9H3R2 512 aa12.45□□□□□ -0.42
PPP1CA-201ENST00000312989 MAGIXQ9H6Y5 334 aa12.45□□□□□ -0.42
PPP1CA-201ENST00000312989 EGLN3Q9H6Z9 239 aa12.45□□□□□ -0.42
PPP1CA-201ENST00000312989 YAE1D1Q9NRH1 226 aa12.45□□□□□ -0.42
PPP1CA-201ENST00000312989 PRPF19Q9UMS4 504 aaKnown RBP12.45□□□□□ -0.42
PPP1CA-201ENST00000312989 A0A1W2PPW3 197 aa12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 OR6C68A6NDL8 312 aa12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 A8MV72 311 aaPredicted RBP12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 BHLHE40O14503 412 aa12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 WNT9BO14905 357 aa12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 KHDRBS3O75525 346 aaKnown RBP12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 LCKP06239 509 aa12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 CCNOP22674 350 aa12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 GDI2P50395 445 aaKnown RBP12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 RPS6KA3P51812 740 aa12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 PCBD1P61457 104 aa12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 LSM6P62312 80 aaKnown RBP12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 MRPS11P82912 194 aaKnown RBP12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 GLO1Q04760 184 aa12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 AQP6Q13520 282 aa12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 CARTPTQ16568 116 aa12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 MEP1BQ16820 701 aa12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 KRTAP27-1Q3LI81 207 aa12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 PGM2L1Q6PCE3 622 aa12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 ZBTB46Q86UZ6 589 aa12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 GLB1L2Q8IW92 636 aa12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 ADGRG5Q8IZF4 528 aa12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 KLF14Q8TD94 323 aaPredicted RBP12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 ZNRF4Q8WWF5 429 aa12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 SLC7A6Q92536 515 aa12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 SLC7A6OSQ96CW6 309 aaPredicted RBP12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 ASB9Q96DX5 294 aa12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 C4orf45Q96LM5 186 aa12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 ERMAPQ96PL5 475 aaPredicted RBP12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 OR2J1Q9GZK6 312 aa12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 KCNN2Q9H2S1 579 aa12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 KRCC1Q9NPI7 259 aaPredicted RBP12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 TMEM160Q9NX00 188 aa12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 NKIRAS2Q9NYR9 191 aa12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 ASH2LQ9UBL3 628 aa12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 KLHL21Q9UJP4 597 aa12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 B9D1Q9UPM9 204 aa12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 LHFPL6Q9Y693 200 aa12.44□□□□□ -0.42
PPP1CA-201ENST00000312989 ZSCAN5BA6NJL1 495 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 RER1O15258 196 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 KRT36O76013 467 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 GASTP01350 101 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 TFP02787 698 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 PSKH1P11801 424 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 IGFBP5P24593 272 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 SLC6A6P31641 620 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 SCRN3Q0VDG4 424 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 RSPO1Q2MKA7 263 aaPredicted RBP12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 SPRNQ5BIV9 151 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 LEG1Q6P5S2 330 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 DHFR2Q86XF0 187 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 NPEPL1Q8NDH3 523 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 SLC26A10Q8NG04 563 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 GNPDA2Q8TDQ7 276 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 NDEL1Q9GZM8 345 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 LRMDAQ9H2I8 198 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 HINT3Q9NQE9 182 aaKnown RBP12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 IL20Q9NYY1 176 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 CDH10Q9Y6N8 788 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 YLPM1P49750 1951 aaKnown RBP12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 TNFRSF11BO00300 401 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 SGCEO43556 437 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 DOK2O60496 412 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 ADH4P08319 380 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 DBHP09172 617 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 ACHEP22303 614 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 GZMKP49863 264 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 ERFP50548 548 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 PPP1CBP62140 327 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 HNRNPA0Q13151 305 aaKnown RBP12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 NKPD1Q17RQ9 610 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 CYB5R2Q6BCY4 276 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 TRPM8Q7Z2W7 1104 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 ZNF540Q8NDQ6 660 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 OR4K13Q8NH42 304 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 ABHD4Q8TB40 342 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 RDH5Q92781 318 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 FN3KQ9H479 309 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 CHODLQ9H9P2 273 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 PNRC2Q9NPJ4 139 aaKnown RBP12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 ZNF275Q9NSD4 429 aaPredicted RBP12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 TBCCD1Q9NVR7 557 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 MRPL22Q9NWU5 206 aaKnown RBP12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 SLCO1C1Q9NYB5 712 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 NDRG4Q9ULP0 352 aaKnown RBP12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 CACNG2Q9Y698 323 aa12.43□□□□□ -0.42
PPP1CA-201ENST00000312989 ATRQ13535 2644 aa12.42□□□□□ -0.42
PPP1CA-201ENST00000312989 H3BSA7 217 aa12.42□□□□□ -0.42
PPP1CA-201ENST00000312989 UBOX5O94941 541 aa12.42□□□□□ -0.42
PPP1CA-201ENST00000312989 IGHV1-46P01743 117 aa12.42□□□□□ -0.42
PPP1CA-201ENST00000312989 ERCC1P07992 297 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms