RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 GABRG1Q8N1C3 465 aa14.65□□□□□ -0.06
CCDC8-201ENST00000307522 PLPP7Q8NBV4 271 aa14.65□□□□□ -0.06
CCDC8-201ENST00000307522 TOLLIPQ9H0E2 274 aa14.65□□□□□ -0.06
CCDC8-201ENST00000307522 ADAP2Q9NPF8 381 aa14.65□□□□□ -0.06
CCDC8-201ENST00000307522 SLC35A3Q9Y2D2 325 aa14.65□□□□□ -0.06
CCDC8-201ENST00000307522 MMP24Q9Y5R2 645 aa14.65□□□□□ -0.06
CCDC8-201ENST00000307522 RHPN2P1A8MT19 583 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 PSMD4P55036 377 aaKnown RBP14.64□□□□□ -0.07
CCDC8-201ENST00000307522 GAS6Q14393 721 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 SSX2Q16385 188 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 AWAT1Q58HT5 328 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 GFI1BQ5VTD9 330 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 MTSS1LQ765P7 747 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 PPP1R14AQ96A00 147 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 ATG101Q9BSB4 218 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 AMDHD2Q9Y303 409 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 RP1P56715 2156 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 LRP3O75074 770 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 THEGLP0DJG4 465 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 NR2C1P13056 603 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 HIST1H1TP22492 207 aaPredicted RBP14.64□□□□□ -0.07
CCDC8-201ENST00000307522 HNRNPA2B1P22626 353 aaKnown RBP14.64□□□□□ -0.07
CCDC8-201ENST00000307522 RPL4P36578 427 aaKnown RBP14.64□□□□□ -0.07
CCDC8-201ENST00000307522 TNFRSF4P43489 277 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 POU3F4P49335 361 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 ZNF813Q6ZN06 617 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 PRSS58Q8IYP2 241 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 RASD2Q96D21 266 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 CNN2Q99439 309 aaKnown RBP14.64□□□□□ -0.07
CCDC8-201ENST00000307522 IKZF2Q9UKS7 526 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 ZNF443Q9Y2A4 671 aaPredicted RBP14.64□□□□□ -0.07
CCDC8-201ENST00000307522 TMED7Q9Y3B3 224 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 WDR45Q9Y484 360 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 TMEM72A0PK05 275 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 TVP23AA6NH52 213 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 METTL12A8MUP2 240 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 OGG1O15527 345 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 ITGA10O75578 1167 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 LAP3P28838 519 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 CEBPGP53567 150 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 PJVKQ0ZLH3 352 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 OR1Q1Q15612 314 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 MFSD12Q6NUT3 480 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 VN1R4Q7Z5H5 301 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 BAP18Q8IXM2 172 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 SLC37A2Q8TED4 501 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 PIK3IP1Q96FE7 263 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 RBM14Q96PK6 669 aaKnown RBP14.64□□□□□ -0.07
CCDC8-201ENST00000307522 SLC6A7Q99884 636 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 SSX3Q99909 188 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 SMIM3Q9BZL3 60 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 CST11Q9H112 138 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 SIGLEC7Q9Y286 467 aa14.64□□□□□ -0.07
CCDC8-201ENST00000307522 H7C1C5 153 aa14.63□□□□□ -0.07
CCDC8-201ENST00000307522 PI3P19957 117 aa14.63□□□□□ -0.07
CCDC8-201ENST00000307522 MAPK3P27361 379 aaPredicted RBP14.63□□□□□ -0.07
CCDC8-201ENST00000307522 PRSS3P35030 304 aa14.63□□□□□ -0.07
CCDC8-201ENST00000307522 TSFMP43897 325 aaKnown RBP14.63□□□□□ -0.07
CCDC8-201ENST00000307522 LCN6P62502 163 aa14.63□□□□□ -0.07
CCDC8-201ENST00000307522 ENPP2Q13822 863 aa14.63□□□□□ -0.07
CCDC8-201ENST00000307522 ACTBL2Q562R1 376 aa14.63□□□□□ -0.07
CCDC8-201ENST00000307522 FBXO42Q6P3S6 717 aa14.63□□□□□ -0.07
CCDC8-201ENST00000307522 ABHD17CQ6PCB6 329 aa14.63□□□□□ -0.07
CCDC8-201ENST00000307522 PGAP1Q75T13 922 aa14.63□□□□□ -0.07
CCDC8-201ENST00000307522 SLC35F3Q8IY50 421 aa14.63□□□□□ -0.07
CCDC8-201ENST00000307522 TEX19Q8NA77 164 aa14.63□□□□□ -0.07
CCDC8-201ENST00000307522 OR10D4PQ8NGN7 298 aa14.63□□□□□ -0.07
CCDC8-201ENST00000307522 GABRG3Q99928 467 aa14.63□□□□□ -0.07
CCDC8-201ENST00000307522 UTP23Q9BRU9 249 aaKnown RBP14.63□□□□□ -0.07
CCDC8-201ENST00000307522 PRDM6Q9NQX0 595 aa14.63□□□□□ -0.07
CCDC8-201ENST00000307522 DCTN6O00399 190 aa14.63□□□□□ -0.07
CCDC8-201ENST00000307522 CTAG2O75638 210 aa14.63□□□□□ -0.07
CCDC8-201ENST00000307522 NDUFS1P28331 727 aa14.63□□□□□ -0.07
CCDC8-201ENST00000307522 HGFACQ04756 655 aa14.63□□□□□ -0.07
CCDC8-201ENST00000307522 NFATC4Q14934 902 aa14.63□□□□□ -0.07
CCDC8-201ENST00000307522 EBPQ15125 230 aaKnown RBP14.63□□□□□ -0.07
CCDC8-201ENST00000307522 SKA3Q8IX90 412 aa14.63□□□□□ -0.07
CCDC8-201ENST00000307522 RNF141Q8WVD5 230 aa14.63□□□□□ -0.07
CCDC8-201ENST00000307522 TMEM106AQ96A25 262 aa14.63□□□□□ -0.07
CCDC8-201ENST00000307522 LMAN2LQ9H0V9 348 aa14.63□□□□□ -0.07
CCDC8-201ENST00000307522 BCL2L10Q9HD36 194 aa14.63□□□□□ -0.07
CCDC8-201ENST00000307522 PRDM7Q9NQW5 492 aa14.63□□□□□ -0.07
CCDC8-201ENST00000307522 SLC2A4RGQ9NR83 387 aa14.63□□□□□ -0.07
CCDC8-201ENST00000307522 KLHDC2Q9Y2U9 406 aa14.63□□□□□ -0.07
CCDC8-201ENST00000307522 URGCP-MRPS24S4R325 110 aa14.63□□□□□ -0.07
CCDC8-201ENST00000307522 NUP210Q8TEM1 1887 aaPredicted RBP14.63□□□□□ -0.07
CCDC8-201ENST00000307522 MPDZO75970 2070 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 IFITM10A6NMD0 228 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 CMPK1P30085 196 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 ILF3Q12906 894 aaKnown RBP eCLIP14.62□□□□□ -0.07
CCDC8-201ENST00000307522 GAMTQ14353 236 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 EXOSC7Q15024 291 aaKnown RBP14.62□□□□□ -0.07
CCDC8-201ENST00000307522 SURF2Q15527 256 aaPredicted RBP14.62□□□□□ -0.07
CCDC8-201ENST00000307522 RPL22L1Q6P5R6 122 aaKnown RBP14.62□□□□□ -0.07
CCDC8-201ENST00000307522 STX12Q86Y82 276 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 BPIFB2Q8N4F0 458 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 ZNF561Q8N587 486 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 ZNF615Q8N8J6 731 aa14.62□□□□□ -0.07
CCDC8-201ENST00000307522 ADAD2Q8NCV1 583 aaKnown RBP14.62□□□□□ -0.07
CCDC8-201ENST00000307522 OR4K17Q8NGC6 315 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms