RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 ZNF814B7Z6K7 855 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 CRMP1Q14194 572 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 MOGAT2Q3SYC2 334 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 TEX261Q6UWH6 196 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 SSX7Q7RTT5 188 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 GABRG1Q8N1C3 465 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 GPR78Q96P69 363 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 TMPRSS5Q9H3S3 457 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 CRLF2Q9HC73 371 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 U3KQ87 197 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 QSER1Q2KHR3 1735 aa7.01□□□□□ -1.29
SF3B3-201ENST00000302516 OR6C68A6NDL8 312 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 ZNF891A8MT65 544 aaPredicted RBP7□□□□□ -1.29
SF3B3-201ENST00000302516 KLK8O60259 260 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 PSMB5P28074 263 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 HLA-FP30511 346 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 SLC6A11P48066 632 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 Q6ZRG5 221 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 BOD1Q96IK1 185 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 TGIF2Q9GZN2 237 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 DLL4Q9NR61 685 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 A0A087WV62 115 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 XRCC3O43542 346 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 IL5P05113 134 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 MMP11P24347 488 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 EPHA5P54756 1037 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 GPR85P60893 370 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 EXOSC2Q13868 293 aaKnown RBP7□□□□□ -1.29
SF3B3-201ENST00000302516 TOR2AQ5JU69 321 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 ELFN2Q5R3F8 820 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 ABHD17CQ6PCB6 329 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 MFSD4AQ8N468 514 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 ARHGEF39Q8N4T4 335 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 SLC38A9Q8NBW4 561 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 OPALINQ96PE5 141 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 CSF3RQ99062 836 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 PLK3Q9H4B4 646 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 LOC107986453A0A1B0GWG9 222 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 P2RY10O00398 339 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 TPPP2P59282 170 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 IQCJQ1A5X6 159 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 RPUSD3Q6P087 351 aaKnown RBP7□□□□□ -1.29
SF3B3-201ENST00000302516 AAED1Q7RTV5 226 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 DCXRQ7Z4W1 244 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 PLPP7Q8NBV4 271 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 OR1J1Q8NGS3 322 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 FAM3CQ92520 227 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 FAM122AQ96E09 287 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 SEC22AQ96IW7 307 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 P2RY12Q9H244 342 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 STARD5Q9NSY2 213 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 NOSIPQ9Y314 301 aaKnown RBP7□□□□□ -1.29
SF3B3-201ENST00000302516 IFITM5A6NNB3 132 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 SNCGO76070 127 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 ZIC2O95409 532 aaPredicted RBP7□□□□□ -1.29
SF3B3-201ENST00000302516 CTSLP07711 333 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 GSTP1P09211 210 aaKnown RBP7□□□□□ -1.29
SF3B3-201ENST00000302516 LIMS3P0CW19 117 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 LIMS4P0CW20 117 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 GLB1P16278 677 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 ENPP1P22413 925 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 LIM2P55344 173 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 TIGITQ495A1 244 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 EXD3Q8N9H8 876 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 TVP23CQ96ET8 276 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 UTP23Q9BRU9 249 aaKnown RBP7□□□□□ -1.29
SF3B3-201ENST00000302516 RTL8AQ9BWD3 113 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 DEGS1O15121 323 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 SSSCA1O60232 199 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 CD38P28907 300 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 RPS23P62266 143 aaKnown RBP7□□□□□ -1.29
SF3B3-201ENST00000302516 ZP2Q05996 745 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 MPPED2Q15777 294 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 TMEM52BQ4KMG9 183 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 CLLU1Q5K131 121 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 GRAMD2AQ8IUY3 354 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 DVL3Q92997 716 aaPredicted RBP7□□□□□ -1.29
SF3B3-201ENST00000302516 POMT1Q9Y6A1 747 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 SPTBP11277 2137 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 SEC14L6B5MCN3 397 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 CTNSO60931 367 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 SLC2A1P11166 492 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 C1orf61Q13536 156 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 AANATQ16613 207 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 USP53Q70EK8 1073 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 DTWD2Q8NBA8 298 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 OR52I2Q8NH67 350 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 PFN4Q8NHR9 129 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 FGF20Q9NP95 211 aaPredicted RBP7□□□□□ -1.29
SF3B3-201ENST00000302516 OBP2AQ9NY56 170 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 PDCD11Q14690 1871 aaKnown RBP7□□□□□ -1.29
SF3B3-201ENST00000302516 DOK2O60496 412 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 CNMDO75829 334 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 SLC10A3P09131 477 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 OR13C7P0DN81 318 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 SRP9P49458 86 aaKnown RBP7□□□□□ -1.29
SF3B3-201ENST00000302516 HSF1Q00613 529 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 MARCH8Q5T0T0 291 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 LKAAEAR1Q8TD35 194 aa7□□□□□ -1.29
SF3B3-201ENST00000302516 ST8SIA1Q92185 356 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms