RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 IGFL3Q6UXB1 125 aa13.9□□□□□ -0.18
HERPUD1-201ENST00000300302 FOXL2NBQ6ZUU3 175 aa13.9□□□□□ -0.18
HERPUD1-201ENST00000300302 GTF2A1LQ9UNN4 478 aa13.9□□□□□ -0.18
HERPUD1-201ENST00000300302 ZNF878C9JN71 531 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 J3QRK9 145 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 CTDSP2O14595 271 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 WNT11O96014 354 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 OCM2P0CE71 109 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 DCTDP32321 178 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 CAV3P56539 151 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 PMP22Q01453 160 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 RNPS1Q15287 305 aaKnown RBP13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 RIPPLY2Q5TAB7 128 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 DDI2Q5TDH0 399 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 KLHL24Q6TFL4 600 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 GPR148Q8TDV2 347 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 RGP1Q92546 391 aaPredicted RBP13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 PARPBPQ9NWS1 579 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 ASH2LQ9UBL3 628 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 NOSIPQ9Y314 301 aaKnown RBP13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 CMAHPQ9Y471 501 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 PCDHGA9Q9Y5G4 932 aaKnown RBP13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 A0A1B0GTH9 108 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 A0A1W2PPK0 400 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 LOC110117498-PIK3R3F6TDL0 507 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 NCR1O76036 304 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 RAB3BP20337 219 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 NPR2P20594 1047 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 KIR3DL2P43630 455 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 MZT2AQ6P582 158 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 CATSPERDQ86XM0 798 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 CPT1CQ8TCG5 803 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 ACOT12Q8WYK0 555 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 FAM122AQ96E09 287 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 DERL3Q96Q80 235 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 SH3GL3Q99963 347 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 NIPAL2Q9H841 368 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 RNF122Q9H9V4 155 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 NOX4Q9NPH5 578 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 EMC9Q9Y3B6 208 aa13.89□□□□□ -0.19
HERPUD1-201ENST00000300302 TRBV5-5A0A0J9YX44 114 aa13.88□□□□□ -0.19
HERPUD1-201ENST00000300302 TMEM269A0A1B0GVZ9 245 aa13.88□□□□□ -0.19
HERPUD1-201ENST00000300302 MRPL33O75394 65 aaKnown RBP13.88□□□□□ -0.19
HERPUD1-201ENST00000300302 PNPP00491 289 aa13.88□□□□□ -0.19
HERPUD1-201ENST00000300302 IGHG3P01860 377 aa13.88□□□□□ -0.19
HERPUD1-201ENST00000300302 CD40LGP29965 261 aa13.88□□□□□ -0.19
HERPUD1-201ENST00000300302 NTF4P34130 210 aa13.88□□□□□ -0.19
HERPUD1-201ENST00000300302 ETV6P41212 452 aa13.88□□□□□ -0.19
HERPUD1-201ENST00000300302 ID4P47928 161 aa13.88□□□□□ -0.19
HERPUD1-201ENST00000300302 MRPS34P82930 218 aaKnown RBP13.88□□□□□ -0.19
HERPUD1-201ENST00000300302 MFGE8Q08431 387 aaPredicted RBP13.88□□□□□ -0.19
HERPUD1-201ENST00000300302 ZNF169Q14929 603 aaPredicted RBP13.88□□□□□ -0.19
HERPUD1-201ENST00000300302 TAF13Q15543 124 aa13.88□□□□□ -0.19
HERPUD1-201ENST00000300302 CFAP77Q6ZQR2 320 aa13.88□□□□□ -0.19
HERPUD1-201ENST00000300302 MCEMP1Q8IX19 187 aa13.88□□□□□ -0.19
HERPUD1-201ENST00000300302 FNDC9Q8TBE3 224 aa13.88□□□□□ -0.19
HERPUD1-201ENST00000300302 WDYHV1Q96HA8 205 aa13.88□□□□□ -0.19
HERPUD1-201ENST00000300302 WDFY2Q96P53 400 aa13.88□□□□□ -0.19
HERPUD1-201ENST00000300302 SLC30A2Q9BRI3 323 aa13.88□□□□□ -0.19
HERPUD1-201ENST00000300302 ZNF416Q9BWM5 594 aa13.88□□□□□ -0.19
HERPUD1-201ENST00000300302 SLITRK2Q9H156 845 aa13.88□□□□□ -0.19
HERPUD1-201ENST00000300302 CRLF2Q9HC73 371 aa13.88□□□□□ -0.19
HERPUD1-201ENST00000300302 SPRR3Q9UBC9 169 aa13.88□□□□□ -0.19
HERPUD1-201ENST00000300302 FBXL3Q9UKT7 428 aa13.88□□□□□ -0.19
HERPUD1-201ENST00000300302 OR6C65A6NJZ3 312 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 ACOD1A6NK06 481 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 ZNF724A8MTY0 619 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 PDCD5O14737 125 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 SRSF10O75494 262 aaKnown RBP13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 RAF1P04049 648 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 SRMP19623 302 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 HSD11B1P28845 292 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 TNFSF8P32971 234 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 MMP16P51512 607 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 PPP5CP53041 499 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 CCDC190Q86UF4 302 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 GJC3Q8NFK1 279 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 NABP1Q96AH0 204 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 KCTD12Q96CX2 325 aaKnown RBP13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 ATF6BQ99941 703 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 BCO1Q9HAY6 547 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 CAMK2AQ9UQM7 478 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 B3GNT3Q9Y2A9 372 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 SSUH2Q9Y2M2 353 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 AKAP13Q12802 2813 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 KRT33AO76009 404 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 PPP3R1P63098 170 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 C3AR1Q16581 482 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 ODF4Q2M2E3 257 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 IDNKQ5T6J7 187 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 FAM27BQ5VT28 67 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 SFXN4Q6P4A7 337 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 ZNF704Q6ZNC4 412 aaPredicted RBP13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 IL17RDQ8NFM7 739 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 OR10S1Q8NGN2 331 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 TSEN15Q8WW01 171 aaKnown RBP13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 HTRA1Q92743 480 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 TCF7L1Q9HCS4 588 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 ABCB9Q9NP78 766 aa13.87□□□□□ -0.19
HERPUD1-201ENST00000300302 OR52A1Q9UKL2 312 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms