RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 ZNF726A6NNF4 738 aa18.45■□□□□ 0.54
SMCO4-201ENST00000298966 SMAD9O15198 467 aaKnown RBP18.45■□□□□ 0.54
SMCO4-201ENST00000298966 CXCL13O43927 109 aa18.45■□□□□ 0.54
SMCO4-201ENST00000298966 CYTIPO60759 359 aa18.45■□□□□ 0.54
SMCO4-201ENST00000298966 SBK2P0C263 348 aa18.45■□□□□ 0.54
SMCO4-201ENST00000298966 HLA-DOBP13765 273 aa18.45■□□□□ 0.54
SMCO4-201ENST00000298966 GSTT1P30711 240 aa18.45■□□□□ 0.54
SMCO4-201ENST00000298966 CLDN15P56746 228 aa18.45■□□□□ 0.54
SMCO4-201ENST00000298966 SLC17A1Q14916 467 aa18.45■□□□□ 0.54
SMCO4-201ENST00000298966 C22orf34Q6ZV56 151 aa18.45■□□□□ 0.54
SMCO4-201ENST00000298966 CLVS1Q8IUQ0 354 aaPredicted RBP18.45■□□□□ 0.54
SMCO4-201ENST00000298966 UBQLNLQ8IYU4 475 aa18.45■□□□□ 0.54
SMCO4-201ENST00000298966 ZNF610Q8N9Z0 462 aa18.45■□□□□ 0.54
SMCO4-201ENST00000298966 RBP7Q96R05 134 aa18.45■□□□□ 0.54
SMCO4-201ENST00000298966 CNN2Q99439 309 aaKnown RBP18.45■□□□□ 0.54
SMCO4-201ENST00000298966 SRXN1Q9BYN0 137 aa18.45■□□□□ 0.54
SMCO4-201ENST00000298966 REG4Q9BYZ8 158 aa18.45■□□□□ 0.54
SMCO4-201ENST00000298966 RNF122Q9H9V4 155 aa18.45■□□□□ 0.54
SMCO4-201ENST00000298966 ASB6Q9NWX5 421 aa18.45■□□□□ 0.54
SMCO4-201ENST00000298966 RSL24D1Q9UHA3 163 aaKnown RBP18.45■□□□□ 0.54
SMCO4-201ENST00000298966 PROCRQ9UNN8 238 aa18.45■□□□□ 0.54
SMCO4-201ENST00000298966 J3QRE1 110 aa18.44■□□□□ 0.54
SMCO4-201ENST00000298966 GPR171O14626 319 aa18.44■□□□□ 0.54
SMCO4-201ENST00000298966 HS3ST1O14792 307 aa18.44■□□□□ 0.54
SMCO4-201ENST00000298966 MYL12BO14950 172 aa18.44■□□□□ 0.54
SMCO4-201ENST00000298966 TRMUO75648 421 aaKnown RBP18.44■□□□□ 0.54
SMCO4-201ENST00000298966 F12P00748 615 aaPredicted RBP18.44■□□□□ 0.54
SMCO4-201ENST00000298966 CGAP01215 116 aa18.44■□□□□ 0.54
SMCO4-201ENST00000298966 PTHP01270 115 aa18.44■□□□□ 0.54
SMCO4-201ENST00000298966 LCKP06239 509 aa18.44■□□□□ 0.54
SMCO4-201ENST00000298966 ADRA2AP08913 450 aa18.44■□□□□ 0.54
SMCO4-201ENST00000298966 PSMB9P28065 219 aa18.44■□□□□ 0.54
SMCO4-201ENST00000298966 TMBIM6P55061 237 aa18.44■□□□□ 0.54
SMCO4-201ENST00000298966 BIDP55957 195 aa18.44■□□□□ 0.54
SMCO4-201ENST00000298966 HSF2Q03933 536 aa18.44■□□□□ 0.54
SMCO4-201ENST00000298966 ETFDHQ16134 617 aa18.44■□□□□ 0.54
SMCO4-201ENST00000298966 THEM4Q5T1C6 240 aa18.44■□□□□ 0.54
SMCO4-201ENST00000298966 CREB3L2Q70SY1 520 aa18.44■□□□□ 0.54
SMCO4-201ENST00000298966 KDM8Q8N371 416 aa18.44■□□□□ 0.54
SMCO4-201ENST00000298966 ACBD7Q8N6N7 88 aa18.44■□□□□ 0.54
SMCO4-201ENST00000298966 NANOGP1Q8N7R0 232 aa18.44■□□□□ 0.54
SMCO4-201ENST00000298966 OR9K2Q8NGE7 335 aa18.44■□□□□ 0.54
SMCO4-201ENST00000298966 OR9Q1Q8NGQ5 310 aa18.44■□□□□ 0.54
SMCO4-201ENST00000298966 COG8Q96MW5 612 aa18.44■□□□□ 0.54
SMCO4-201ENST00000298966 BCL7BQ9BQE9 202 aa18.44■□□□□ 0.54
SMCO4-201ENST00000298966 SYT4Q9H2B2 425 aa18.44■□□□□ 0.54
SMCO4-201ENST00000298966 GP6Q9HCN6 339 aa18.44■□□□□ 0.54
SMCO4-201ENST00000298966 LSM2Q9Y333 95 aaKnown RBP18.44■□□□□ 0.54
SMCO4-201ENST00000298966 ZNF175Q9Y473 711 aa18.44■□□□□ 0.54
SMCO4-201ENST00000298966 CCDC160A6NGH7 325 aa18.43■□□□□ 0.54
SMCO4-201ENST00000298966 ZNF814B7Z6K7 855 aa18.43■□□□□ 0.54
SMCO4-201ENST00000298966 CD5LO43866 347 aa18.43■□□□□ 0.54
SMCO4-201ENST00000298966 OR2T7P0C7T2 308 aa18.43■□□□□ 0.54
SMCO4-201ENST00000298966 PPP3CBP16298 524 aa18.43■□□□□ 0.54
SMCO4-201ENST00000298966 MELKQ14680 651 aa18.43■□□□□ 0.54
SMCO4-201ENST00000298966 CHRFAM7AQ494W8 412 aa18.43■□□□□ 0.54
SMCO4-201ENST00000298966 LINC01590Q5TEZ4 76 aa18.43■□□□□ 0.54
SMCO4-201ENST00000298966 FCRLAQ7L513 359 aa18.43■□□□□ 0.54
SMCO4-201ENST00000298966 NOXO1Q8NFA2 376 aa18.43■□□□□ 0.54
SMCO4-201ENST00000298966 OR51G2Q8NGK0 314 aa18.43■□□□□ 0.54
SMCO4-201ENST00000298966 OR2T27Q8NH04 317 aa18.43■□□□□ 0.54
SMCO4-201ENST00000298966 TRMT61AQ96FX7 289 aaKnown RBP18.43■□□□□ 0.54
SMCO4-201ENST00000298966 DOK1Q99704 481 aa18.43■□□□□ 0.54
SMCO4-201ENST00000298966 MRPL13Q9BYD1 178 aaKnown RBP18.43■□□□□ 0.54
SMCO4-201ENST00000298966 MARCH7Q9H992 704 aa18.43■□□□□ 0.54
SMCO4-201ENST00000298966 ADGRL4Q9HBW9 690 aa18.43■□□□□ 0.54
SMCO4-201ENST00000298966 KLHL9Q9P2J3 617 aa18.43■□□□□ 0.54
SMCO4-201ENST00000298966 IGKV3D-15A0A087WSY6 115 aa18.42■□□□□ 0.54
SMCO4-201ENST00000298966 PHF1O43189 567 aaPredicted RBP18.42■□□□□ 0.54
SMCO4-201ENST00000298966 NOL3O60936 208 aaKnown RBP18.42■□□□□ 0.54
SMCO4-201ENST00000298966 KHDRBS3O75525 346 aaKnown RBP18.42■□□□□ 0.54
SMCO4-201ENST00000298966 PLAUP00749 431 aa18.42■□□□□ 0.54
SMCO4-201ENST00000298966 THBDP07204 575 aa18.42■□□□□ 0.54
SMCO4-201ENST00000298966 FCGR2AP12318 317 aa18.42■□□□□ 0.54
SMCO4-201ENST00000298966 CLRN1P58418 232 aa18.42■□□□□ 0.54
SMCO4-201ENST00000298966 GLO1Q04760 184 aa18.42■□□□□ 0.54
SMCO4-201ENST00000298966 RNPS1Q15287 305 aaKnown RBP18.42■□□□□ 0.54
SMCO4-201ENST00000298966 TIGD6Q17RP2 521 aa18.42■□□□□ 0.54
SMCO4-201ENST00000298966 CNPY1Q3B7I2 92 aa18.42■□□□□ 0.54
SMCO4-201ENST00000298966 GPR107Q5VW38 600 aa18.42■□□□□ 0.54
SMCO4-201ENST00000298966 ALDH16A1Q8IZ83 802 aa18.42■□□□□ 0.54
SMCO4-201ENST00000298966 OR6V1Q8N148 313 aa18.42■□□□□ 0.54
SMCO4-201ENST00000298966 OR52N1Q8NH53 320 aa18.42■□□□□ 0.54
SMCO4-201ENST00000298966 ISOC1Q96CN7 298 aa18.42■□□□□ 0.54
SMCO4-201ENST00000298966 YIPF6Q96EC8 236 aa18.42■□□□□ 0.54
SMCO4-201ENST00000298966 NUAK2Q9H093 628 aa18.42■□□□□ 0.54
SMCO4-201ENST00000298966 ISYNA1Q9NPH2 558 aa18.42■□□□□ 0.54
SMCO4-201ENST00000298966 MED29Q9NX70 200 aa18.42■□□□□ 0.54
SMCO4-201ENST00000298966 TAS2R16Q9NYV7 291 aa18.42■□□□□ 0.54
SMCO4-201ENST00000298966 EMC3Q9P0I2 261 aa18.42■□□□□ 0.54
SMCO4-201ENST00000298966 B9D1Q9UPM9 204 aa18.42■□□□□ 0.54
SMCO4-201ENST00000298966 LAMP3Q9UQV4 416 aa18.42■□□□□ 0.54
SMCO4-201ENST00000298966 SLC35F4A4IF30 521 aa18.41■□□□□ 0.54
SMCO4-201ENST00000298966 ZNF716A6NP11 495 aa18.41■□□□□ 0.54
SMCO4-201ENST00000298966 PHYHO14832 338 aa18.41■□□□□ 0.54
SMCO4-201ENST00000298966 GYPBP06028 91 aa18.41■□□□□ 0.54
SMCO4-201ENST00000298966 PGA4P0DJD7 388 aa18.41■□□□□ 0.54
SMCO4-201ENST00000298966 PGA3P0DJD8 388 aa18.41■□□□□ 0.54
SMCO4-201ENST00000298966 CLUP10909 449 aa18.41■□□□□ 0.54
SMCO4-201ENST00000298966 TMPRSS11AQ6ZMR5 421 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms