RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 FBXL3Q9UKT7 428 aa18.98■□□□□ 0.63
SOX17-201ENST00000297316 LRP12Q9Y561 859 aa18.98■□□□□ 0.63
SOX17-201ENST00000297316 LANCL1O43813 399 aa18.97■□□□□ 0.63
SOX17-201ENST00000297316 ZNF254O75437 659 aa18.97■□□□□ 0.63
SOX17-201ENST00000297316 ZNF43P17038 809 aa18.97■□□□□ 0.63
SOX17-201ENST00000297316 TEX30Q5JUR7 227 aa18.97■□□□□ 0.63
SOX17-201ENST00000297316 FAM205BPQ63HN1 556 aa18.97■□□□□ 0.63
SOX17-201ENST00000297316 CORO6Q6QEF8 472 aa18.97■□□□□ 0.63
SOX17-201ENST00000297316 KRT77Q7Z794 578 aa18.97■□□□□ 0.63
SOX17-201ENST00000297316 LGALS14Q8TCE9 139 aa18.97■□□□□ 0.63
SOX17-201ENST00000297316 HAVCR2Q8TDQ0 301 aa18.97■□□□□ 0.63
SOX17-201ENST00000297316 SFXN2Q96NB2 322 aa18.97■□□□□ 0.63
SOX17-201ENST00000297316 ABI3Q9P2A4 366 aa18.97■□□□□ 0.63
SOX17-201ENST00000297316 ZNF221Q9UK13 617 aa18.97■□□□□ 0.63
SOX17-201ENST00000297316 TRAV8-7A0A075B6U6 113 aa18.97■□□□□ 0.63
SOX17-201ENST00000297316 KHDRBS3O75525 346 aaKnown RBP18.97■□□□□ 0.63
SOX17-201ENST00000297316 SUCLG1P53597 346 aaKnown RBP18.97■□□□□ 0.63
SOX17-201ENST00000297316 MFAP5Q13361 173 aa18.97■□□□□ 0.63
SOX17-201ENST00000297316 TRIQKQ629K1 86 aa18.97■□□□□ 0.63
SOX17-201ENST00000297316 FDX2Q6P4F2 183 aa18.97■□□□□ 0.63
SOX17-201ENST00000297316 STAC2Q6ZMT1 411 aa18.97■□□□□ 0.63
SOX17-201ENST00000297316 GGNQ86UU5 652 aa18.97■□□□□ 0.63
SOX17-201ENST00000297316 ST7LQ8TDW4 575 aa18.97■□□□□ 0.63
SOX17-201ENST00000297316 ABHD1Q96SE0 405 aa18.97■□□□□ 0.63
SOX17-201ENST00000297316 ABRACLQ9P1F3 81 aa18.97■□□□□ 0.63
SOX17-201ENST00000297316 TMEM212A6NML5 194 aa18.96■□□□□ 0.63
SOX17-201ENST00000297316 HSPB2A8KAH6 182 aa18.96■□□□□ 0.63
SOX17-201ENST00000297316 EIF1AYO14602 144 aaKnown RBP18.96■□□□□ 0.63
SOX17-201ENST00000297316 ADRB1P08588 477 aa18.96■□□□□ 0.63
SOX17-201ENST00000297316 CLDN12P56749 244 aa18.96■□□□□ 0.63
SOX17-201ENST00000297316 HSPB2Q16082 182 aa18.96■□□□□ 0.63
SOX17-201ENST00000297316 ZNF239Q16600 458 aaKnown RBP18.96■□□□□ 0.63
SOX17-201ENST00000297316 PCK2Q16822 640 aa18.96■□□□□ 0.63
SOX17-201ENST00000297316 ATAD3CQ5T2N8 411 aa18.96■□□□□ 0.63
SOX17-201ENST00000297316 DNM1P34Q6PK57 102 aa18.96■□□□□ 0.63
SOX17-201ENST00000297316 DCXRQ7Z4W1 244 aa18.96■□□□□ 0.63
SOX17-201ENST00000297316 DNAAF1Q8NEP3 725 aa18.96■□□□□ 0.63
SOX17-201ENST00000297316 KCNJ15Q99712 375 aa18.96■□□□□ 0.63
SOX17-201ENST00000297316 FAM173AQ9BQD7 235 aa18.96■□□□□ 0.63
SOX17-201ENST00000297316 IRF2BPLQ9H1B7 796 aa18.96■□□□□ 0.63
SOX17-201ENST00000297316 RYDENQ9NUL5 291 aaKnown RBP18.96■□□□□ 0.63
SOX17-201ENST00000297316 GTF2A1LQ9UNN4 478 aa18.96■□□□□ 0.63
SOX17-201ENST00000297316 TRBV5-7A0A0A0MS05 114 aa18.96■□□□□ 0.63
SOX17-201ENST00000297316 FAM166BA8MTA8 275 aa18.96■□□□□ 0.63
SOX17-201ENST00000297316 CENPBD1B2RD01 187 aa18.96■□□□□ 0.63
SOX17-201ENST00000297316 PGA4P0DJD7 388 aa18.96■□□□□ 0.63
SOX17-201ENST00000297316 PGA3P0DJD8 388 aa18.96■□□□□ 0.63
SOX17-201ENST00000297316 ZNF823P16415 610 aa18.96■□□□□ 0.63
SOX17-201ENST00000297316 LRRTM1Q86UE6 522 aa18.96■□□□□ 0.63
SOX17-201ENST00000297316 GLCCI1Q86VQ1 547 aa18.96■□□□□ 0.63
SOX17-201ENST00000297316 C11orf40Q8WZ69 217 aa18.96■□□□□ 0.63
SOX17-201ENST00000297316 ZNF775Q96BV0 537 aaPredicted RBP18.96■□□□□ 0.63
SOX17-201ENST00000297316 SLC22A4Q9H015 551 aa18.96■□□□□ 0.63
SOX17-201ENST00000297316 COMMD4Q9H0A8 199 aa18.96■□□□□ 0.63
SOX17-201ENST00000297316 BOKQ9UMX3 212 aaPredicted RBP18.96■□□□□ 0.63
SOX17-201ENST00000297316 IFITM5A6NNB3 132 aa18.95■□□□□ 0.62
SOX17-201ENST00000297316 DOK2O60496 412 aa18.95■□□□□ 0.62
SOX17-201ENST00000297316 SLC43A1O75387 559 aa18.95■□□□□ 0.62
SOX17-201ENST00000297316 CLDN15P56746 228 aa18.95■□□□□ 0.62
SOX17-201ENST00000297316 CLDN17P56750 224 aa18.95■□□□□ 0.62
SOX17-201ENST00000297316 CLRN1P58418 232 aa18.95■□□□□ 0.62
SOX17-201ENST00000297316 RASGEF1BQ0VAM2 473 aa18.95■□□□□ 0.62
SOX17-201ENST00000297316 GALNTL5Q7Z4T8 443 aa18.95■□□□□ 0.62
SOX17-201ENST00000297316 ZNF454Q8N9F8 522 aa18.95■□□□□ 0.62
SOX17-201ENST00000297316 SLC25A44Q96H78 314 aaPredicted RBP18.95■□□□□ 0.62
SOX17-201ENST00000297316 ZNF385AQ96PM9 386 aaKnown RBP18.95■□□□□ 0.62
SOX17-201ENST00000297316 WACQ9BTA9 647 aa18.95■□□□□ 0.62
SOX17-201ENST00000297316 N6AMT1Q9Y5N5 214 aa18.95■□□□□ 0.62
SOX17-201ENST00000297316 SRSF10O75494 262 aaKnown RBP18.95■□□□□ 0.62
SOX17-201ENST00000297316 TALDO1P37837 337 aa18.95■□□□□ 0.62
SOX17-201ENST00000297316 KIR2DL3P43628 341 aa18.95■□□□□ 0.62
SOX17-201ENST00000297316 PITPNBP48739 271 aa18.95■□□□□ 0.62
SOX17-201ENST00000297316 KCTD18Q6PI47 426 aaPredicted RBP18.95■□□□□ 0.62
SOX17-201ENST00000297316 NOXO1Q8NFA2 376 aa18.95■□□□□ 0.62
SOX17-201ENST00000297316 GPR148Q8TDV2 347 aa18.95■□□□□ 0.62
SOX17-201ENST00000297316 TMEM106AQ96A25 262 aa18.95■□□□□ 0.62
SOX17-201ENST00000297316 ZNF703Q9H7S9 590 aaPredicted RBP18.95■□□□□ 0.62
SOX17-201ENST00000297316 SPATA2Q9UM82 520 aa18.95■□□□□ 0.62
SOX17-201ENST00000297316 PCDHGA9Q9Y5G4 932 aaKnown RBP18.95■□□□□ 0.62
SOX17-201ENST00000297316 AIPO00170 330 aa18.94■□□□□ 0.62
SOX17-201ENST00000297316 RIDAP52758 137 aaKnown RBP18.94■□□□□ 0.62
SOX17-201ENST00000297316 CAMK2BQ13554 666 aa18.94■□□□□ 0.62
SOX17-201ENST00000297316 C19orf18Q8NEA5 215 aa18.94■□□□□ 0.62
SOX17-201ENST00000297316 ZNF671Q8TAW3 534 aa18.94■□□□□ 0.62
SOX17-201ENST00000297316 TRIM63Q969Q1 353 aa18.94■□□□□ 0.62
SOX17-201ENST00000297316 OR2B2Q9GZK3 357 aa18.94■□□□□ 0.62
SOX17-201ENST00000297316 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.94■□□□□ 0.62
SOX17-201ENST00000297316 TCF7L1Q9HCS4 588 aa18.94■□□□□ 0.62
SOX17-201ENST00000297316 CSAG2Q9Y5P2 127 aa18.94■□□□□ 0.62
SOX17-201ENST00000297316 V9GY05 133 aa18.94■□□□□ 0.62
SOX17-201ENST00000297316 GPR171O14626 319 aa18.94■□□□□ 0.62
SOX17-201ENST00000297316 TFECO14948 347 aaPredicted RBP18.94■□□□□ 0.62
SOX17-201ENST00000297316 IGHG1P01857 330 aa18.94■□□□□ 0.62
SOX17-201ENST00000297316 MAGEA5P43359 124 aa18.94■□□□□ 0.62
SOX17-201ENST00000297316 ASPHD2Q6ICH7 369 aa18.94■□□□□ 0.62
SOX17-201ENST00000297316 CATSPERDQ86XM0 798 aa18.94■□□□□ 0.62
SOX17-201ENST00000297316 GLB1L2Q8IW92 636 aa18.94■□□□□ 0.62
SOX17-201ENST00000297316 RBP7Q96R05 134 aa18.94■□□□□ 0.62
SOX17-201ENST00000297316 TTTY12Q9BZ98 90 aa18.94■□□□□ 0.62
SOX17-201ENST00000297316 PDCD5O14737 125 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms