RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 EDAQ92838 391 aa11.9□□□□□ -0.51
SLC28A1-201ENST00000286749 SEC22AQ96IW7 307 aa11.9□□□□□ -0.51
SLC28A1-201ENST00000286749 ZNF75AQ96N20 296 aa11.9□□□□□ -0.51
SLC28A1-201ENST00000286749 PELOQ9BRX2 385 aaKnown RBP11.9□□□□□ -0.51
SLC28A1-201ENST00000286749 PDCD10Q9BUL8 212 aa11.9□□□□□ -0.51
SLC28A1-201ENST00000286749 MTIF3Q9H2K0 278 aaKnown RBP11.9□□□□□ -0.51
SLC28A1-201ENST00000286749 HRH3Q9Y5N1 445 aa11.9□□□□□ -0.51
SLC28A1-201ENST00000286749 PCDH15Q96QU1 1955 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 LOC100509620A0A075B734 347 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 SPTY2D1-AS1A0A0U1RR47 76 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 A0A1B0GW55 424 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 PRAMEF26H0Y7S4 382 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 MPZL1O95297 269 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 DUX4L2P0CJ85 424 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 DUX4L3P0CJ86 424 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 DUX4L4P0CJ87 422 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 DUX4L5P0CJ88 424 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 DUX4L6P0CJ89 424 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 DUX4L7P0CJ90 424 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 THEGLP0DJG4 465 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 RORAP35398 523 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 DNASE1L1P49184 302 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 STARP49675 285 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 FGL1Q08830 312 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 TAF13Q15543 124 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 TMEM151BQ8IW70 566 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 KCNRGQ8N5I3 272 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 OR13C3Q8NGS6 347 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 TSLPQ969D9 159 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 NKD1Q969G9 470 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 SLC46A1Q96NT5 459 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 TAS2R3Q9NYW6 316 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 DUX4Q9UBX2 424 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 GPN3Q9UHW5 284 aaPredicted RBP11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 EMC9Q9Y3B6 208 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 SZT2Q5T011 3432 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 FITM1A5D6W6 292 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 FRG2CA6NGY1 282 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 LMX1BO60663 402 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 PLATP00750 562 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 GALNSP34059 522 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 ARHGDIBP52566 201 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 DEFA5Q01523 94 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 SGCBQ16585 318 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 LIN54Q6MZP7 749 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 CORO6Q6QEF8 472 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 CD163Q86VB7 1156 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 C7orf61Q8IZ16 206 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 ACBD4Q8NC06 268 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 OIT3Q8WWZ8 545 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 LRRC46Q96FV0 321 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 ZNF587Q96SQ5 575 aaPredicted RBP11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 VRK1Q99986 396 aaPredicted RBP11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 EDEM2Q9BV94 578 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 BARX1Q9HBU1 254 aaPredicted RBP11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 MYOZ1Q9NP98 299 aaPredicted RBP11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 LANCL2Q9NS86 450 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 SOHLH2Q9NX45 425 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 TNFSF18Q9UNG2 199 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 VSIG4Q9Y279 399 aa11.89□□□□□ -0.51
SLC28A1-201ENST00000286749 DNASE2O00115 360 aaPredicted RBP11.88□□□□□ -0.51
SLC28A1-201ENST00000286749 CD74P04233 296 aa11.88□□□□□ -0.51
SLC28A1-201ENST00000286749 FSTP19883 344 aa11.88□□□□□ -0.51
SLC28A1-201ENST00000286749 IL12BP29460 328 aa11.88□□□□□ -0.51
SLC28A1-201ENST00000286749 C11orf87Q6NUJ2 197 aa11.88□□□□□ -0.51
SLC28A1-201ENST00000286749 PAPD4Q6PIY7 484 aaKnown RBP11.88□□□□□ -0.51
SLC28A1-201ENST00000286749 MOB3CQ70IA8 216 aa11.88□□□□□ -0.51
SLC28A1-201ENST00000286749 ZNF584Q8IVC4 421 aa11.88□□□□□ -0.51
SLC28A1-201ENST00000286749 ADIPOR1Q96A54 375 aa11.88□□□□□ -0.51
SLC28A1-201ENST00000286749 SLCO5A1Q9H2Y9 848 aa11.88□□□□□ -0.51
SLC28A1-201ENST00000286749 TXNIPQ9H3M7 391 aa11.88□□□□□ -0.51
SLC28A1-201ENST00000286749 IFT46Q9NQC8 304 aa11.88□□□□□ -0.51
SLC28A1-201ENST00000286749 COMMD9Q9P000 198 aa11.88□□□□□ -0.51
SLC28A1-201ENST00000286749 PLCL2Q9UPR0 1127 aa11.88□□□□□ -0.51
SLC28A1-201ENST00000286749 SLCO1B1Q9Y6L6 691 aa11.88□□□□□ -0.51
SLC28A1-201ENST00000286749 SEC16AO15027 2179 aa11.88□□□□□ -0.51
SLC28A1-201ENST00000286749 LOC107986453A0A1B0GWG9 222 aa11.88□□□□□ -0.51
SLC28A1-201ENST00000286749 LDLRAD4O15165 306 aa11.88□□□□□ -0.51
SLC28A1-201ENST00000286749 BCL2L11O43521 198 aa11.88□□□□□ -0.51
SLC28A1-201ENST00000286749 GP1BBP13224 206 aa11.88□□□□□ -0.51
SLC28A1-201ENST00000286749 GABRA4P48169 554 aa11.88□□□□□ -0.51
SLC28A1-201ENST00000286749 C3orf33Q6P1S2 294 aa11.88□□□□□ -0.51
SLC28A1-201ENST00000286749 BPIFCQ8NFQ6 507 aa11.88□□□□□ -0.51
SLC28A1-201ENST00000286749 OR52N5Q8NH56 324 aa11.88□□□□□ -0.51
SLC28A1-201ENST00000286749 ZBTB8AQ96BR9 441 aa11.88□□□□□ -0.51
SLC28A1-201ENST00000286749 TMEM106CQ9BVX2 250 aa11.88□□□□□ -0.51
SLC28A1-201ENST00000286749 ZNF471Q9BX82 626 aaPredicted RBP11.88□□□□□ -0.51
SLC28A1-201ENST00000286749 VSX1Q9NZR4 365 aaPredicted RBP11.88□□□□□ -0.51
SLC28A1-201ENST00000286749 COA3Q9Y2R0 106 aaPredicted RBP11.88□□□□□ -0.51
SLC28A1-201ENST00000286749 IL32P24001 234 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 DLSTP36957 453 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 CAPZBP47756 277 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 OR1D4P47884 311 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 ATP1B3P54709 279 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 ZNF345Q14585 488 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 OR2W3Q7Z3T1 314 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 BOLLQ8N9W6 283 aaKnown RBP11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 OR4D6Q8NGJ1 314 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 PPP1R1CQ8WVI7 109 aa11.87□□□□□ -0.51
SLC28A1-201ENST00000286749 NARS2Q96I59 477 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms