RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 CBX5P45973 191 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 ATP5J2P56134 94 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 TMEM50BP56557 158 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 FFAR4Q5NUL3 377 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 OR2G6Q5TZ20 316 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 OLFML2AQ68BL7 652 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 ATPAF2Q8N5M1 289 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 MS4A15Q8N5U1 240 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 PRR26Q8N8Z3 221 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 WDR31Q8NA23 367 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 NANPQ8TBE9 248 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 MED30Q96HR3 178 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 UPF3AQ9H1J1 476 aaKnown RBP2.36□□□□□ -2.03
CHD1-201ENST00000284049 TAS2R7Q9NYW3 318 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 PAIP2BQ9ULR5 123 aaKnown RBP2.36□□□□□ -2.03
CHD1-201ENST00000284049 SLC22A13Q9Y226 551 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 B4DXG7 233 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 GATCO43716 136 aaKnown RBP2.36□□□□□ -2.03
CHD1-201ENST00000284049 CXCL13O43927 109 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 LATS1O95835 1130 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 JCHAINP01591 159 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 ZNF250P15622 560 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 BTDP43251 543 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 EFNA3P52797 238 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 RPS15AP62244 130 aaKnown RBP2.36□□□□□ -2.03
CHD1-201ENST00000284049 FADDQ13158 208 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 ITIH4Q14624 930 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 C2CD6Q53TS8 623 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 MFSD14CQ5VZR4 134 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 HORMAD1Q86X24 394 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 MAPKAPK5-AS1Q8N8E1 139 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 NUP37Q8NFH4 326 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 MRAPQ8TCY5 172 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 SAP25Q8TEE9 199 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 MARC2Q969Z3 335 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 ZBTB9Q96C00 473 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 BTF3L4Q96K17 158 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 SLC29A3Q9BZD2 475 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 WDR13Q9H1Z4 485 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 PCYOX1Q9UHG3 505 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 RSPH14Q9UHP6 348 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 MMP17Q9ULZ9 603 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 PSG1P11464 419 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 UGT2B7P16662 529 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 IDSP22304 550 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 PSMB9P28065 219 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 ARL2P36404 184 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 SOX3P41225 446 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 SERPINB9P50453 376 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 ART1P52961 327 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 SUB1P53999 127 aaKnown RBP eCLIP2.36□□□□□ -2.03
CHD1-201ENST00000284049 RAB8AP61006 207 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 LTBQ06643 244 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 TNXAQ16473 311 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 NRF1Q16656 503 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 Q4G0T1 1027 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 LCLAT1Q6UWP7 414 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 TMEM219Q86XT9 240 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 APRG1Q8IVJ8 170 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 GEMIN6Q8WXD5 167 aaKnown RBP2.36□□□□□ -2.03
CHD1-201ENST00000284049 LZICQ8WZA0 190 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 FAM3DQ96BQ1 224 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 C2orf48Q96LS8 159 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 PGLYRP2Q96PD5 576 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 TMEM208Q9BTX3 173 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 GPN2Q9H9Y4 310 aaPredicted RBP2.36□□□□□ -2.03
CHD1-201ENST00000284049 PAQR5Q9NXK6 330 aaPredicted RBP2.36□□□□□ -2.03
CHD1-201ENST00000284049 NTNG1Q9Y2I2 539 aa2.36□□□□□ -2.03
CHD1-201ENST00000284049 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.36□□□□□ -2.03
CHD1-201ENST00000284049 TRGV8A0A0C4DH27 118 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 DAPL1A0PJW8 107 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 SNAPINO95295 136 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 CATP04040 527 aaKnown RBP2.35□□□□□ -2.03
CHD1-201ENST00000284049 IGF1P05019 195 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 CSNK2A2P19784 350 aaPredicted RBP2.35□□□□□ -2.03
CHD1-201ENST00000284049 XCR1P46094 333 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 TGM4P49221 684 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 PGFP49763 221 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 AP3S2P59780 193 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 TGFBR3Q03167 851 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 CKAP4Q07065 602 aaKnown RBP2.35□□□□□ -2.03
CHD1-201ENST00000284049 CD226Q15762 336 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 FAHD1Q6P587 224 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 DNM1P46Q6ZS02 220 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 RASSF6Q6ZTQ3 369 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 RFLNBQ8N5W9 214 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 SECTM1Q8WVN6 248 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 TESCQ96BS2 214 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 RCHY1Q96PM5 261 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 FOXC2Q99958 501 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 HSD17B14Q9BPX1 270 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 ELOVL4Q9GZR5 314 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 ABCB9Q9NP78 766 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 COMMD9Q9P000 198 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 RNASEK-C17orf49H0YIS7 233 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 KPNA3O00505 521 aaPredicted RBP2.35□□□□□ -2.03
CHD1-201ENST00000284049 XKRYO14609 159 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 FABP7O15540 132 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 CRLF1O75462 422 aa2.35□□□□□ -2.03
CHD1-201ENST00000284049 GAPDHP04406 335 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms