RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 URGCP-MRPS24S4R325 110 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 FUCA1P04066 466 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 ZDHHC11BP0C7U3 371 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 SMIM18P0DKX4 95 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 BSGP35613 385 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 EMDP50402 254 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 AARDQ4LEZ3 155 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 TMEM179BQ7Z7N9 219 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 ETFBKMTQ8IXQ9 262 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 OR51A2Q8NGJ7 313 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 TRIB1Q96RU8 372 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 SPNS1Q9H2V7 528 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 NKX6-3A6NJ46 265 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 CSF3P09919 207 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 OR13C7P0DN81 318 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 SDHAP31040 664 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 SOX18P35713 384 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 RBP2P50120 134 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 RUNX2Q13950 521 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 RBMS3Q6XE24 437 aaKnown RBP10.45□□□□□ -0.74
USP53-201ENST00000274030 DOK3Q7L591 496 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 VASH2Q86V25 355 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 SLC35G3Q8N808 338 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 C11orf40Q8WZ69 217 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 FYTTD1Q96QD9 318 aaKnown RBP10.45□□□□□ -0.74
USP53-201ENST00000274030 CMC2Q9NRP2 79 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 PPP1R3CQ9UQK1 317 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 SLCO1B1Q9Y6L6 691 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 TAF1P21675 1872 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 ZNF816-ZNF321PA0A0X1KG74 233 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 SIRPB1O00241 398 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 EPHA2P29317 976 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 ARRB2P32121 409 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 ZNF321PQ8N8H1 164 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 SFT2D1Q8WV19 159 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 RNF141Q8WVD5 230 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 GNB4Q9HAV0 340 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 BCO1Q9HAY6 547 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 GHRLQ9UBU3 117 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 LAMB4A4D0S4 1761 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 WDR1O75083 606 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 PMS2P2O95744 297 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 THBS1P07996 1170 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 P2RX3P56373 397 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 AGERQ15109 404 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 ADIRFQ15847 76 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 DHRS4L2Q6PKH6 230 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 Q6ZS52 159 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 LGI3Q8N145 548 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 PXT1Q8NFP0 134 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 RHNO1Q9BSD3 238 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 SHARPINQ9H0F6 387 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 GPR84Q9NQS5 396 aa10.45□□□□□ -0.74
USP53-201ENST00000274030 NDRG4Q9ULP0 352 aaKnown RBP10.45□□□□□ -0.74
USP53-201ENST00000274030 ARPC4-TTLL3A0A0A6YYG9 625 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 TMEM129A0AVI4 362 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 LRRC30A6NM36 301 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 OR6C76A6NM76 312 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 CEACAM5P06731 702 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 HLA-DOBP13765 273 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 DUSP8Q13202 625 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 OR1M1Q8NGA1 313 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 OLIG1Q8TAK6 271 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 UCN3Q969E3 161 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 LGALS8O00214 317 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 MAGEB1P43366 347 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 PPICP45877 212 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 GSK3AP49840 483 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 ZNF133P52736 654 aaPredicted RBP10.44□□□□□ -0.74
USP53-201ENST00000274030 SRPXP78539 464 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 DMWDQ09019 674 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 FCRL6Q6DN72 434 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 PRSS35Q8N3Z0 413 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 ARIH2OSQ8N7S6 290 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 SSUH2Q9Y2M2 353 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 GABARAPH6UMI1 98 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 GNB1P62873 340 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 KHDC1LQ5JSQ8 128 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 FAM26EQ8N5C1 309 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 OR1S2Q8NGQ3 325 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 SLCO5A1Q9H2Y9 848 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 KCNG2Q9UJ96 466 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 CROCCQ5TZA2 2017 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 hCG_1809904A0A1W2PP81 198 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 A0A1W2PPE2 198 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 A0A1W2PR64 198 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 A0A1W2PRV1 198 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 M0R135 149 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 YIF1AO95070 293 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 ACHEP22303 614 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 CAPZBP47756 277 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 PPIAP62937 165 aaKnown RBP10.44□□□□□ -0.74
USP53-201ENST00000274030 OR2A1Q8NGT9 310 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 ZNF799Q96GE5 643 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 SLC25A21Q9BQT8 299 aaPredicted RBP10.44□□□□□ -0.74
USP53-201ENST00000274030 ZNF2Q9BSG1 426 aaPredicted RBP10.44□□□□□ -0.74
USP53-201ENST00000274030 PLA2G12AQ9BZM1 189 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 PLEKHF2Q9H8W4 249 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 OSGIN2Q9Y236 505 aa10.44□□□□□ -0.74
USP53-201ENST00000274030 KNTC1P50748 2209 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms