RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 MARCH1Q8TCQ1 289 aa11.6□□□□□ -0.55
HERC6-202ENST00000273960 MRM2Q9UI43 246 aaKnown RBP11.6□□□□□ -0.55
HERC6-202ENST00000273960 WDR87Q6ZQQ6 2873 aa11.6□□□□□ -0.55
HERC6-202ENST00000273960 IGKV1-8A0A0C4DH67 115 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 IGLON5A6NGN9 336 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 C1QL1O75973 258 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 SCGB1D2O95969 90 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 IFNA6P05013 189 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 ITGB2P05107 769 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 GDI1P31150 447 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 GJA4P35212 333 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 DIO1P49895 249 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 EMDP50402 254 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 SURF2Q15527 256 aaPredicted RBP11.59□□□□□ -0.55
HERC6-202ENST00000273960 DCST2Q5T1A1 773 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 SLC48A1Q6P1K1 146 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 ANKRD16Q6P6B7 361 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 OR13C8Q8NGS7 320 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 MS4A6EQ96DS6 147 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 SEC61A2Q9H9S3 476 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 TRPM6Q9BX84 2022 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 ZNF106Q9H2Y7 1883 aaKnown RBP11.59□□□□□ -0.55
HERC6-202ENST00000273960 H0YIZ8 118 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 ATXN7O15265 892 aaPredicted RBP11.59□□□□□ -0.55
HERC6-202ENST00000273960 ZNF749O43361 778 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 CDC40O60508 579 aaKnown RBP eCLIP11.59□□□□□ -0.55
HERC6-202ENST00000273960 CD74P04233 296 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 GSK3AP49840 483 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 NPY4RP50391 375 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 GAMTQ14353 236 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 ZNF674Q2M3X9 581 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 CDCP2Q5VXM1 449 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 DMBX1Q8NFW5 382 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 OR4N2Q8NGD1 307 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 OR51A2Q8NGJ7 313 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 C14orf144Q96I85 54 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 UTP23Q9BRU9 249 aaKnown RBP11.59□□□□□ -0.55
HERC6-202ENST00000273960 COMMD4Q9H0A8 199 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 SAGE1Q9NXZ1 904 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 APOBEC3BQ9UH17 382 aaKnown RBP11.59□□□□□ -0.55
HERC6-202ENST00000273960 COL4A6Q14031 1691 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 A0A1W2PP55 124 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 VEGFDO43915 354 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 GPRIN2O60269 458 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 SNAPC5O75971 98 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 QDPRP09417 244 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 ADRB3P13945 408 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 RSU1Q15404 277 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 TANGO2Q6ICL3 276 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 ABHD17CQ6PCB6 329 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 UNQ9370/PRO34162Q6UXP9 181 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 MDGA2Q7Z553 956 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 AVL9Q8NBF6 648 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 CCDC74AQ96AQ1 378 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 DTD2Q96FN9 168 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 LURAP1Q96LR2 239 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 AMELYQ99218 206 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 LPAR3Q9UBY5 353 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 KCNG2Q9UJ96 466 aa11.59□□□□□ -0.55
HERC6-202ENST00000273960 DOCK9Q9BZ29 2069 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 NDUFB2O95178 105 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 JMJD7P0C870 316 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 HRH1P35367 487 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 CDKN2AP42771 156 aaKnown RBP11.58□□□□□ -0.56
HERC6-202ENST00000273960 REEP5Q00765 189 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 ZNF77Q15935 545 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 ZNF529Q6P280 563 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 SYS1Q8N2H4 156 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 UBAC2Q8NBM4 344 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 ARRDC3Q96B67 414 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 ZDHHC12Q96GR4 267 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 TCEAL7Q9BRU2 100 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 EDEM2Q9BV94 578 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 CRISPLD2Q9H0B8 497 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 LMAN2LQ9H0V9 348 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 SEBOXQ9HB31 216 aaPredicted RBP11.58□□□□□ -0.56
HERC6-202ENST00000273960 PRDM7Q9NQW5 492 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 PLXNA3P51805 1871 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 C9orf170A2RU37 121 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 DUXAA6NLW8 204 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 SRPX2O60687 465 aaPredicted RBP11.58□□□□□ -0.56
HERC6-202ENST00000273960 STK17BO94768 372 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 ZNF888P0CJ79 500 aaPredicted RBP11.58□□□□□ -0.56
HERC6-202ENST00000273960 CD96P40200 585 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 GLP1RP43220 463 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 ACTBP60709 375 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 ACTG1P63261 375 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 EEF1A1P68104 462 aaKnown RBP11.58□□□□□ -0.56
HERC6-202ENST00000273960 HIST2H3AQ71DI3 136 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 LRP11Q86VZ4 500 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 MITD1Q8WV92 249 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 PHYHIPLQ96FC7 376 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 SPACA5Q96QH8 159 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 OR52A5Q9H2C5 316 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 TMPRSS5Q9H3S3 457 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 SLC2A4RGQ9NR83 387 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 KLK13Q9UKR3 277 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 URB1O60287 2271 aaKnown RBP11.58□□□□□ -0.56
HERC6-202ENST00000273960 C17orf113A0A1B0GUU1 675 aa11.58□□□□□ -0.56
HERC6-202ENST00000273960 C2orf74A8MZ97 194 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms