RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 CNOT2Q9NZN8 540 aaKnown RBP12.78□□□□□ -0.36
TNFRSF11A-201ENST00000269485 RENP00797 406 aa12.77□□□□□ -0.36
TNFRSF11A-201ENST00000269485 HOXB6P17509 224 aaKnown RBP12.77□□□□□ -0.36
TNFRSF11A-201ENST00000269485 S100PP25815 95 aa12.77□□□□□ -0.36
TNFRSF11A-201ENST00000269485 EVX1P49640 407 aa12.77□□□□□ -0.36
TNFRSF11A-201ENST00000269485 HMGA2P52926 109 aa12.77□□□□□ -0.36
TNFRSF11A-201ENST00000269485 ZNF124Q15973 351 aa12.77□□□□□ -0.36
TNFRSF11A-201ENST00000269485 TFAP2EQ6VUC0 442 aa12.77□□□□□ -0.36
TNFRSF11A-201ENST00000269485 DPPA2Q7Z7J5 298 aa12.77□□□□□ -0.36
TNFRSF11A-201ENST00000269485 NAA40Q86UY6 237 aa12.77□□□□□ -0.36
TNFRSF11A-201ENST00000269485 BVESQ8NE79 360 aa12.77□□□□□ -0.36
TNFRSF11A-201ENST00000269485 POP5Q969H6 163 aaKnown RBP12.77□□□□□ -0.36
TNFRSF11A-201ENST00000269485 ZNF524Q96C55 264 aa12.77□□□□□ -0.36
TNFRSF11A-201ENST00000269485 MFFQ9GZY8 342 aa12.77□□□□□ -0.36
TNFRSF11A-201ENST00000269485 MFSD2BA6NFX1 497 aa12.77□□□□□ -0.37
TNFRSF11A-201ENST00000269485 AGPAT2O15120 278 aa12.77□□□□□ -0.37
TNFRSF11A-201ENST00000269485 TXNDC12O95881 172 aa12.77□□□□□ -0.37
TNFRSF11A-201ENST00000269485 SBK2P0C263 348 aa12.77□□□□□ -0.37
TNFRSF11A-201ENST00000269485 S100A11P31949 105 aa12.77□□□□□ -0.37
TNFRSF11A-201ENST00000269485 PITPNBP48739 271 aa12.77□□□□□ -0.37
TNFRSF11A-201ENST00000269485 EEF1A1P68104 462 aaKnown RBP12.77□□□□□ -0.37
TNFRSF11A-201ENST00000269485 MLLT11Q13015 90 aaPredicted RBP12.77□□□□□ -0.37
TNFRSF11A-201ENST00000269485 MEDAGQ5VYS4 303 aa12.77□□□□□ -0.37
TNFRSF11A-201ENST00000269485 NDUFAF7Q7L592 441 aa12.77□□□□□ -0.37
TNFRSF11A-201ENST00000269485 DUSP18Q8NEJ0 188 aa12.77□□□□□ -0.37
TNFRSF11A-201ENST00000269485 BPIFCQ8NFQ6 507 aa12.77□□□□□ -0.37
TNFRSF11A-201ENST00000269485 APOBEC4Q8WW27 367 aaKnown RBP12.77□□□□□ -0.37
TNFRSF11A-201ENST00000269485 INTS12Q96CB8 462 aaKnown RBP12.77□□□□□ -0.37
TNFRSF11A-201ENST00000269485 VSTM2LQ96N03 204 aa12.77□□□□□ -0.37
TNFRSF11A-201ENST00000269485 PRSS27Q9BQR3 290 aa12.77□□□□□ -0.37
TNFRSF11A-201ENST00000269485 NOX4Q9NPH5 578 aa12.77□□□□□ -0.37
TNFRSF11A-201ENST00000269485 PLA2G3Q9NZ20 509 aa12.77□□□□□ -0.37
TNFRSF11A-201ENST00000269485 KIF25Q9UIL4 384 aa12.77□□□□□ -0.37
TNFRSF11A-201ENST00000269485 SLC35A3Q9Y2D2 325 aa12.77□□□□□ -0.37
TNFRSF11A-201ENST00000269485 COA3Q9Y2R0 106 aaPredicted RBP12.77□□□□□ -0.37
TNFRSF11A-201ENST00000269485 ZNF106Q9H2Y7 1883 aaKnown RBP12.77□□□□□ -0.37
TNFRSF11A-201ENST00000269485 PRR19A6NJB7 356 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 AIPO00170 330 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 CD2P06729 351 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 EIF4EP06730 217 aaKnown RBP12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 NR2C1P13056 603 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 IFNGR1P15260 489 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 ANXA7P20073 488 aaKnown RBP12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 ITGA3P26006 1051 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 DNASE1L1P49184 302 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 ZNF41P51814 821 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 RAB2AP61019 212 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 GUCA2BQ16661 112 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 TMED4Q7Z7H5 227 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 OR51A4Q8NGJ6 313 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 SIGLEC11Q96RL6 698 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 CGGBP1Q9UFW8 167 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 KCND3Q9UK17 655 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 NPFFR2Q9Y5X5 522 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 NUBP2Q9Y5Y2 271 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 USF3Q68DE3 2245 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 TRABD2BA6NFA1 517 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 C9J4A7 227 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 SMIM10L1P0DMW3 83 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 TSFMP43897 325 aaKnown RBP12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 TGIF1Q15583 401 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 FCRLAQ7L513 359 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 C9orf40Q8IXQ3 194 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 AKR7LQ8NHP1 331 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 SMIM10Q96HG1 83 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 GUCD1Q96NT3 240 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 DMRTA2Q96SC8 542 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 GPN1Q9HCN4 374 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 NTMQ9P121 344 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 NDRG3Q9UGV2 375 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 FBXL3Q9UKT7 428 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 NOSIPQ9Y314 301 aaKnown RBP12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 KIAA1549LQ6ZVL6 1849 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 SLC22A31A6NKX4 558 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 ZNF593O00488 134 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 ACAA1P09110 424 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 KLK2P20151 261 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 FASLGP48023 281 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 PPT1P50897 306 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 RAB40BQ12829 278 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 MLC1Q15049 377 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 OCLNQ16625 522 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 H3F3CQ6NXT2 135 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 NIPAL3Q6P499 406 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 PXT1Q8NFP0 134 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 SCARB1Q8WTV0 552 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 DVL3Q92997 716 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 ABHD1Q96SE0 405 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 DCAF16Q9NXF7 216 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 WNT16Q9UBV4 365 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 TINAGQ9UJW2 476 aa12.76□□□□□ -0.37
TNFRSF11A-201ENST00000269485 TMED7-TICAM2A0A0A6YYA0 188 aa12.75□□□□□ -0.37
TNFRSF11A-201ENST00000269485 CRYBA1P05813 215 aa12.75□□□□□ -0.37
TNFRSF11A-201ENST00000269485 NFYBP25208 207 aa12.75□□□□□ -0.37
TNFRSF11A-201ENST00000269485 GPR143P51810 404 aa12.75□□□□□ -0.37
TNFRSF11A-201ENST00000269485 NKPD1Q17RQ9 610 aa12.75□□□□□ -0.37
TNFRSF11A-201ENST00000269485 SCGB2B2Q4G0G5 96 aa12.75□□□□□ -0.37
TNFRSF11A-201ENST00000269485 LIPNQ5VXI9 398 aa12.75□□□□□ -0.37
TNFRSF11A-201ENST00000269485 FAM219AQ8IW50 185 aa12.75□□□□□ -0.37
TNFRSF11A-201ENST00000269485 PMM1Q92871 262 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms