RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 FZD5Q13467 585 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 ANKRD16Q6P6B7 361 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 FAM109AQ8N4B1 249 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 NDNFQ8TB73 568 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 RND1Q92730 232 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 APOBEC3DQ96AK3 386 aaPredicted RBP12.59□□□□□ -0.39
CDH1-201ENST00000261769 CACNG2Q9Y698 323 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 KCNE3Q9Y6H6 103 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 CACNA1CQ13936 2221 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 H3BMQ9 156 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 M0R233 179 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 SC5DO75845 299 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 SULT1C4O75897 302 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 IFNA2P01563 188 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 ZNF26P17031 533 aaPredicted RBP12.59□□□□□ -0.39
CDH1-201ENST00000261769 SNCAP37840 140 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 TMPRSS3P57727 454 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 ZNF74Q16587 644 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 ELFN2Q5R3F8 820 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 GLYATL3Q5SZD4 288 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 SYS1Q8N2H4 156 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 OR4M1Q8NGD0 313 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 OPALINQ96PE5 141 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 C12orf10Q9HB07 376 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 SIRT5Q9NXA8 310 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 CNOT1A5YKK6 2376 aaKnown RBP12.59□□□□□ -0.39
CDH1-201ENST00000261769 KIR2DS1A0A191URI9 304 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 E9PI62 339 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 HSPB6O14558 160 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 ABCD4O14678 606 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 DDOSTP39656 456 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 KIR2DS4P43632 304 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 INSM1Q01101 510 aaPredicted RBP12.59□□□□□ -0.39
CDH1-201ENST00000261769 AQP6Q13520 282 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 KIR2DS1Q14954 304 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 TOMM34Q15785 309 aaPredicted RBP12.59□□□□□ -0.39
CDH1-201ENST00000261769 GSG1Q2KHT4 349 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 B3GNTL1Q67FW5 361 aaPredicted RBP12.59□□□□□ -0.39
CDH1-201ENST00000261769 ACSM5Q6NUN0 579 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 CORO6Q6QEF8 472 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 GLIPR1L1Q6UWM5 242 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 TRILQ7L0X0 811 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 ADGRE4PQ86SQ3 457 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 ANGPTL5Q86XS5 388 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 TMIGD2Q96BF3 282 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 GABARAPL1Q9H0R8 117 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 PLEKHA3Q9HB20 300 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 EXOSC3Q9NQT5 275 aaKnown RBP12.59□□□□□ -0.39
CDH1-201ENST00000261769 A0A0A6YYH2 397 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 A6NJ64 397 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 BHLHE40O14503 412 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 PIPP12273 146 aaPredicted RBP12.59□□□□□ -0.39
CDH1-201ENST00000261769 RPL23AP62750 156 aaKnown RBP12.59□□□□□ -0.39
CDH1-201ENST00000261769 RPS25P62851 125 aaKnown RBP12.59□□□□□ -0.39
CDH1-201ENST00000261769 AADACL3Q5VUY0 350 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 TMEM108Q6UXF1 575 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 SLC25A45Q8N413 288 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 BPIFB2Q8N4F0 458 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 OR10D3Q8NH80 312 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 OR51E1Q8TCB6 317 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 ARSGQ96EG1 525 aa12.59□□□□□ -0.39
CDH1-201ENST00000261769 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 TRDV1A0A1B0GX56 115 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 TRABD2BA6NFA1 517 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 SLC22A5O76082 557 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 S100A9P06702 114 aaKnown RBP12.58□□□□□ -0.4
CDH1-201ENST00000261769 TBRG1Q3YBR2 411 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 SPINK14Q6IE38 97 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 SLC22A18ASQ8N1D0 253 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 CLDN22Q8N7P3 220 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 ZNF321PQ8N8H1 164 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 SLCO4A1Q96BD0 722 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 ABHD6Q9BV23 337 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 EXO1Q9UQ84 846 aaKnown RBP12.58□□□□□ -0.4
CDH1-201ENST00000261769 NUBP2Q9Y5Y2 271 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 EP300Q09472 2414 aaPredicted RBP12.58□□□□□ -0.4
CDH1-201ENST00000261769 A0A0B4J2E0 115 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 A0A1B0GX12 115 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 MEIS3P1A6NDR6 274 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 SH2D1BO14796 132 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 PTTG1O95997 202 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 IFNA17P01571 189 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 ZNF81P51508 661 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 RAB1AP62820 205 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 ZNF141Q15928 474 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 SYT9Q86SS6 491 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 GCNT2Q8N0V5 402 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 FAM3DQ96BQ1 224 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 FBXO17Q96EF6 278 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 MMP25Q9NPA2 562 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 GPR173Q9NS66 373 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 B9D1Q9UPM9 204 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 ZAR1LA6NP61 321 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 HPGDSO60760 199 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 ZNF883P0CG24 379 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 C3orf49Q96BT1 292 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 ZNF501Q96CX3 271 aaPredicted RBP12.58□□□□□ -0.4
CDH1-201ENST00000261769 KIRREL1Q96J84 757 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 RGCCQ9H4X1 137 aa12.58□□□□□ -0.4
CDH1-201ENST00000261769 TREM1Q9NP99 234 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms