RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 OR8B4Q96RC9 309 aa15.43■□□□□ 0.06
SRSF1-201ENST00000258962 ABHD6Q9BV23 337 aa15.43■□□□□ 0.06
SRSF1-201ENST00000258962 CDADC1Q9BWV3 514 aa15.43■□□□□ 0.06
SRSF1-201ENST00000258962 GLTPQ9NZD2 209 aa15.43■□□□□ 0.06
SRSF1-201ENST00000258962 IKZF2Q9UKS7 526 aa15.43■□□□□ 0.06
SRSF1-201ENST00000258962 PHF3Q92576 2039 aaKnown RBP15.42■□□□□ 0.06
SRSF1-201ENST00000258962 A0A1B0GVC2 190 aa15.42■□□□□ 0.06
SRSF1-201ENST00000258962 AQP7O14520 342 aa15.42■□□□□ 0.06
SRSF1-201ENST00000258962 KRT8P05787 483 aa15.42■□□□□ 0.06
SRSF1-201ENST00000258962 QDPRP09417 244 aa15.42■□□□□ 0.06
SRSF1-201ENST00000258962 EDNRAP25101 427 aa15.42■□□□□ 0.06
SRSF1-201ENST00000258962 LAP3P28838 519 aa15.42■□□□□ 0.06
SRSF1-201ENST00000258962 S100A5P33763 92 aa15.42■□□□□ 0.06
SRSF1-201ENST00000258962 NTF4P34130 210 aa15.42■□□□□ 0.06
SRSF1-201ENST00000258962 CSNK1A1P48729 337 aa15.42■□□□□ 0.06
SRSF1-201ENST00000258962 SELENOPP49908 381 aa15.42■□□□□ 0.06
SRSF1-201ENST00000258962 GDI2P50395 445 aaKnown RBP15.42■□□□□ 0.06
SRSF1-201ENST00000258962 ZNF133P52736 654 aaPredicted RBP15.42■□□□□ 0.06
SRSF1-201ENST00000258962 NANOS3P60323 173 aaKnown RBP15.42■□□□□ 0.06
SRSF1-201ENST00000258962 SRYQ05066 204 aa15.42■□□□□ 0.06
SRSF1-201ENST00000258962 EIF2B1Q14232 305 aaKnown RBP15.42■□□□□ 0.06
SRSF1-201ENST00000258962 BCL2A1Q16548 175 aa15.42■□□□□ 0.06
SRSF1-201ENST00000258962 SLC18B1Q6NT16 456 aa15.42■□□□□ 0.06
SRSF1-201ENST00000258962 FAM220AQ7Z4H9 259 aa15.42■□□□□ 0.06
SRSF1-201ENST00000258962 DOLPP1Q86YN1 238 aa15.42■□□□□ 0.06
SRSF1-201ENST00000258962 YIPF7Q8N8F6 280 aa15.42■□□□□ 0.06
SRSF1-201ENST00000258962 ZNF454Q8N9F8 522 aa15.42■□□□□ 0.06
SRSF1-201ENST00000258962 NEIL3Q8TAT5 605 aa15.42■□□□□ 0.06
SRSF1-201ENST00000258962 HAVCR2Q8TDQ0 301 aa15.42■□□□□ 0.06
SRSF1-201ENST00000258962 ASB17Q8WXJ9 295 aa15.42■□□□□ 0.06
SRSF1-201ENST00000258962 HSD17B8Q92506 261 aa15.42■□□□□ 0.06
SRSF1-201ENST00000258962 GHSRQ92847 366 aa15.42■□□□□ 0.06
SRSF1-201ENST00000258962 KCTD7Q96MP8 289 aa15.42■□□□□ 0.06
SRSF1-201ENST00000258962 NXF2Q9GZY0 626 aaKnown RBP15.42■□□□□ 0.06
SRSF1-201ENST00000258962 TIGARQ9NQ88 270 aa15.42■□□□□ 0.06
SRSF1-201ENST00000258962 CRNNQ9UBG3 495 aaPredicted RBP15.42■□□□□ 0.06
SRSF1-201ENST00000258962 UGT2A1Q9Y4X1 527 aa15.42■□□□□ 0.06
SRSF1-201ENST00000258962 A0A1W2PPL8 197 aa15.41■□□□□ 0.06
SRSF1-201ENST00000258962 SC5DO75845 299 aa15.41■□□□□ 0.06
SRSF1-201ENST00000258962 RPP14O95059 124 aaKnown RBP15.41■□□□□ 0.06
SRSF1-201ENST00000258962 ACTL6AO96019 429 aa15.41■□□□□ 0.06
SRSF1-201ENST00000258962 CD1AP06126 327 aa15.41■□□□□ 0.06
SRSF1-201ENST00000258962 INHBBP09529 407 aa15.41■□□□□ 0.06
SRSF1-201ENST00000258962 TACSTD2P09758 323 aa15.41■□□□□ 0.06
SRSF1-201ENST00000258962 ZNF823P16415 610 aa15.41■□□□□ 0.06
SRSF1-201ENST00000258962 ROM1Q03395 351 aa15.41■□□□□ 0.06
SRSF1-201ENST00000258962 LRRN1Q6UXK5 716 aa15.41■□□□□ 0.06
SRSF1-201ENST00000258962 FCRLAQ7L513 359 aa15.41■□□□□ 0.06
SRSF1-201ENST00000258962 CD163Q86VB7 1156 aa15.41■□□□□ 0.06
SRSF1-201ENST00000258962 LINC00346Q8IVM7 164 aa15.41■□□□□ 0.06
SRSF1-201ENST00000258962 MEIOBQ8N635 442 aa15.41■□□□□ 0.06
SRSF1-201ENST00000258962 OR6Q1Q8NGQ2 317 aa15.41■□□□□ 0.06
SRSF1-201ENST00000258962 OR13C5Q8NGS8 318 aa15.41■□□□□ 0.06
SRSF1-201ENST00000258962 ST7LQ8TDW4 575 aa15.41■□□□□ 0.06
SRSF1-201ENST00000258962 ZNF775Q96BV0 537 aaPredicted RBP15.41■□□□□ 0.06
SRSF1-201ENST00000258962 TTYH2Q9BSA4 534 aa15.41■□□□□ 0.06
SRSF1-201ENST00000258962 BARHL1Q9BZE3 327 aa15.41■□□□□ 0.06
SRSF1-201ENST00000258962 GALNT8Q9NY28 637 aa15.41■□□□□ 0.06
SRSF1-201ENST00000258962 SPRR3Q9UBC9 169 aa15.41■□□□□ 0.06
SRSF1-201ENST00000258962 FOXD3Q9UJU5 478 aaPredicted RBP15.41■□□□□ 0.06
SRSF1-201ENST00000258962 RCE1Q9Y256 329 aa15.41■□□□□ 0.06
SRSF1-201ENST00000258962 PEX16Q9Y5Y5 336 aa15.41■□□□□ 0.06
SRSF1-201ENST00000258962 RELNP78509 3460 aa15.41■□□□□ 0.06
SRSF1-201ENST00000258962 DOPEY2Q9Y3R5 2298 aa15.41■□□□□ 0.06
SRSF1-201ENST00000258962 USP9XQ93008 2570 aaPredicted RBP15.4■□□□□ 0.06
SRSF1-201ENST00000258962 TRBV2A0A0J9YWF9 115 aa15.4■□□□□ 0.06
SRSF1-201ENST00000258962 SHISA3A0PJX4 238 aa15.4■□□□□ 0.06
SRSF1-201ENST00000258962 AQP8O94778 261 aa15.4■□□□□ 0.06
SRSF1-201ENST00000258962 CDRT1O95170 752 aa15.4■□□□□ 0.06
SRSF1-201ENST00000258962 IL1AP01583 271 aa15.4■□□□□ 0.06
SRSF1-201ENST00000258962 CLEC2LP0C7M8 214 aa15.4■□□□□ 0.06
SRSF1-201ENST00000258962 CDAP32320 146 aa15.4■□□□□ 0.06
SRSF1-201ENST00000258962 BMXP51813 675 aa15.4■□□□□ 0.06
SRSF1-201ENST00000258962 C10orf128Q5T292 105 aa15.4■□□□□ 0.06
SRSF1-201ENST00000258962 OR6N1Q8NGY5 312 aa15.4■□□□□ 0.06
SRSF1-201ENST00000258962 OR52N5Q8NH56 324 aa15.4■□□□□ 0.06
SRSF1-201ENST00000258962 ABHD4Q8TB40 342 aa15.4■□□□□ 0.06
SRSF1-201ENST00000258962 ABHD3Q8WU67 409 aa15.4■□□□□ 0.06
SRSF1-201ENST00000258962 PDCD1LG2Q9BQ51 273 aa15.4■□□□□ 0.06
SRSF1-201ENST00000258962 MED18Q9BUE0 208 aa15.4■□□□□ 0.06
SRSF1-201ENST00000258962 CACNA1CQ13936 2221 aa15.4■□□□□ 0.06
SRSF1-201ENST00000258962 HSPB2A8KAH6 182 aa15.39■□□□□ 0.05
SRSF1-201ENST00000258962 NR2C1P13056 603 aa15.39■□□□□ 0.05
SRSF1-201ENST00000258962 SDC2P34741 201 aa15.39■□□□□ 0.05
SRSF1-201ENST00000258962 RORCP51449 518 aa15.39■□□□□ 0.05
SRSF1-201ENST00000258962 RPS11P62280 158 aaKnown RBP eCLIP15.39■□□□□ 0.05
SRSF1-201ENST00000258962 RASGEF1BQ0VAM2 473 aa15.39■□□□□ 0.05
SRSF1-201ENST00000258962 MRPL28Q13084 256 aaKnown RBP15.39■□□□□ 0.05
SRSF1-201ENST00000258962 HSPB2Q16082 182 aa15.39■□□□□ 0.05
SRSF1-201ENST00000258962 KCNMB1Q16558 191 aa15.39■□□□□ 0.05
SRSF1-201ENST00000258962 PLXDC2Q6UX71 529 aa15.39■□□□□ 0.05
SRSF1-201ENST00000258962 C3P1Q6ZMU1 363 aa15.39■□□□□ 0.05
SRSF1-201ENST00000258962 FOXL2NBQ6ZUU3 175 aa15.39■□□□□ 0.05
SRSF1-201ENST00000258962 SPATC1Q76KD6 591 aa15.39■□□□□ 0.05
SRSF1-201ENST00000258962 DCXRQ7Z4W1 244 aa15.39■□□□□ 0.05
SRSF1-201ENST00000258962 C20orf196Q8IYI0 205 aa15.39■□□□□ 0.05
SRSF1-201ENST00000258962 ZNF679Q8IYX0 411 aa15.39■□□□□ 0.05
SRSF1-201ENST00000258962 OR10H5Q8NGA6 315 aa15.39■□□□□ 0.05
SRSF1-201ENST00000258962 OR5M9Q8NGP3 310 aa15.39■□□□□ 0.05
SRSF1-201ENST00000258962 RNF128Q8TEB7 428 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms