RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 CLLU1Q5K131 121 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 YOD1Q5VVQ6 348 aaPredicted RBP13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 DCXRQ7Z4W1 244 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 COMMD4Q9H0A8 199 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 TRIM77I1YAP6 450 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 EFNA2O43921 213 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 KHDRBS3O75525 346 aaKnown RBP13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 TRAPPC6AO75865 159 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 PNPP00491 289 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 ACSM1Q08AH1 577 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 SGCBQ16585 318 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 PLXDC2Q6UX71 529 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 STPG2Q8N412 459 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 KCTD12Q96CX2 325 aaKnown RBP13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 MRPL48Q96GC5 212 aaKnown RBP13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 NMNAT2Q9BZQ4 307 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 CHRNA10Q9GZZ6 450 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 SDHAF3Q9NRP4 125 aa13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 C19orf25Q9UFG5 118 aaPredicted RBP13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 CDV3Q9UKY7 258 aaKnown RBP13.12□□□□□ -0.31
TRAFD1-201ENST00000257604 FXYD6-FXYD2A0A087WZ82 144 aa13.11□□□□□ -0.31
TRAFD1-201ENST00000257604 ICAM2P13598 275 aa13.11□□□□□ -0.31
TRAFD1-201ENST00000257604 GNALP38405 381 aa13.11□□□□□ -0.31
TRAFD1-201ENST00000257604 NDUFAF7Q7L592 441 aa13.11□□□□□ -0.31
TRAFD1-201ENST00000257604 OR2G2Q8NGZ5 317 aa13.11□□□□□ -0.31
TRAFD1-201ENST00000257604 FBXW5Q969U6 566 aa13.11□□□□□ -0.31
TRAFD1-201ENST00000257604 GINS4Q9BRT9 223 aa13.11□□□□□ -0.31
TRAFD1-201ENST00000257604 FXYD6Q9H0Q3 95 aa13.11□□□□□ -0.31
TRAFD1-201ENST00000257604 SCP2D1Q9UJQ7 156 aa13.11□□□□□ -0.31
TRAFD1-201ENST00000257604 CER1O95813 267 aa13.11□□□□□ -0.31
TRAFD1-201ENST00000257604 JMJD7P0C870 316 aa13.11□□□□□ -0.31
TRAFD1-201ENST00000257604 PRSS12P56730 875 aa13.11□□□□□ -0.31
TRAFD1-201ENST00000257604 SPOCK1Q08629 439 aa13.11□□□□□ -0.31
TRAFD1-201ENST00000257604 OPCMLQ14982 345 aa13.11□□□□□ -0.31
TRAFD1-201ENST00000257604 WDR38Q5JTN6 314 aa13.11□□□□□ -0.31
TRAFD1-201ENST00000257604 ZNF468Q5VIY5 522 aaPredicted RBP13.11□□□□□ -0.31
TRAFD1-201ENST00000257604 OR10K2Q6IF99 312 aa13.11□□□□□ -0.31
TRAFD1-201ENST00000257604 TMEM81Q6P7N7 255 aa13.11□□□□□ -0.31
TRAFD1-201ENST00000257604 KCTD20Q7Z5Y7 419 aa13.11□□□□□ -0.31
TRAFD1-201ENST00000257604 CMTM4Q8IZR5 234 aa13.11□□□□□ -0.31
TRAFD1-201ENST00000257604 RELL2Q8NC24 303 aaPredicted RBP13.11□□□□□ -0.31
TRAFD1-201ENST00000257604 OR10H5Q8NGA6 315 aa13.11□□□□□ -0.31
TRAFD1-201ENST00000257604 CMKLR1Q99788 373 aa13.11□□□□□ -0.31
TRAFD1-201ENST00000257604 SLITRK2Q9H156 845 aa13.11□□□□□ -0.31
TRAFD1-201ENST00000257604 FKBP7Q9Y680 259 aa13.11□□□□□ -0.31
TRAFD1-201ENST00000257604 NSG1A0A0A6YYJ2 146 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 SLC22A23A1A5C7 686 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 ZNHIT1O43257 154 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 LDOC1O95751 146 aaPredicted RBP13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 CCL3P10147 92 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 ALOX5APP20292 161 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 DNASE1L1P49184 302 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 RPS15P62841 145 aaKnown RBP13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 BDH1Q02338 343 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 GLO1Q04760 184 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 MFGE8Q08431 387 aaPredicted RBP13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 C17orf107Q6ZR85 190 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 ZNF441Q8N8Z8 693 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 OR51D1Q8NGF3 324 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 OR52I2Q8NH67 350 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 SLC22A8Q8TCC7 542 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 SPACA5Q96QH8 159 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 ABHD6Q9BV23 337 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 MRPL22Q9NWU5 206 aaKnown RBP13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 CGGBP1Q9UFW8 167 aaPredicted RBP13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 AUP1Q9Y679 476 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 LOC101059948A0A1B0GTJ6 334 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 OR2T1O43869 369 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 LMX1BO60663 402 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 UBL3O95164 117 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 RLN1P04808 185 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 MPLP40238 635 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 HSF1Q00613 529 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 MFAP5Q13361 173 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 BTN2A1Q7KYR7 527 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 SYS1Q8N2H4 156 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 JAGN1Q8N5M9 183 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 OR11G2Q8NGC1 345 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 TXNIPQ9H3M7 391 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 OR6C76A6NM76 312 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 ZNF814B7Z6K7 855 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 OGG1O15527 345 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 CXCL2P19875 107 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 SLC35D3Q5M8T2 416 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 H1FNTQ75WM6 255 aaPredicted RBP13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 NAXEQ8NCW5 288 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 SYNPRQ8TBG9 265 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 DDIT4LQ96D03 193 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 SDHAF2Q9NX18 166 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 V9GY05 133 aa13.1□□□□□ -0.31
TRAFD1-201ENST00000257604 MS4A18H0YCH9 400 aa13.09□□□□□ -0.31
TRAFD1-201ENST00000257604 TO15178 435 aa13.09□□□□□ -0.31
TRAFD1-201ENST00000257604 UPK3AO75631 287 aa13.09□□□□□ -0.31
TRAFD1-201ENST00000257604 HOXD4P09016 255 aaPredicted RBP13.09□□□□□ -0.31
TRAFD1-201ENST00000257604 DCTDP32321 178 aa13.09□□□□□ -0.31
TRAFD1-201ENST00000257604 MS4A18Q3C1V0 323 aa13.09□□□□□ -0.31
TRAFD1-201ENST00000257604 SLC18B1Q6NT16 456 aa13.09□□□□□ -0.31
TRAFD1-201ENST00000257604 STAC2Q6ZMT1 411 aa13.09□□□□□ -0.31
TRAFD1-201ENST00000257604 YRDCQ86U90 279 aaKnown RBP13.09□□□□□ -0.31
TRAFD1-201ENST00000257604 GLB1L2Q8IW92 636 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms