RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 CTSFQ9UBX1 484 aa12.14□□□□□ -0.47
VHL-201ENST00000256474 ETV7Q9Y603 341 aa12.14□□□□□ -0.47
VHL-201ENST00000256474 GNB3P16520 340 aa12.14□□□□□ -0.47
VHL-201ENST00000256474 PPICP45877 212 aa12.14□□□□□ -0.47
VHL-201ENST00000256474 MRPS10P82664 201 aaKnown RBP12.14□□□□□ -0.47
VHL-201ENST00000256474 SERTAD2Q14140 314 aa12.14□□□□□ -0.47
VHL-201ENST00000256474 C1orf140Q5VVS0 124 aa12.14□□□□□ -0.47
VHL-201ENST00000256474 OLFML2AQ68BL7 652 aa12.14□□□□□ -0.47
VHL-201ENST00000256474 ST8SIA2Q92186 375 aa12.14□□□□□ -0.47
VHL-201ENST00000256474 PHYHIPQ92561 330 aa12.14□□□□□ -0.47
VHL-201ENST00000256474 BANF2Q9H503 90 aa12.14□□□□□ -0.47
VHL-201ENST00000256474 ZCCHC4Q9H5U6 513 aa12.14□□□□□ -0.47
VHL-201ENST00000256474 CLDN16Q9Y5I7 305 aa12.14□□□□□ -0.47
VHL-201ENST00000256474 KANTRA0A1W2PQU2 76 aa12.14□□□□□ -0.47
VHL-201ENST00000256474 METTL12A8MUP2 240 aa12.14□□□□□ -0.47
VHL-201ENST00000256474 PMP2P02689 132 aa12.14□□□□□ -0.47
VHL-201ENST00000256474 SFTPDP35247 375 aa12.14□□□□□ -0.47
VHL-201ENST00000256474 GLO1Q04760 184 aa12.14□□□□□ -0.47
VHL-201ENST00000256474 ELFN2Q5R3F8 820 aa12.14□□□□□ -0.47
VHL-201ENST00000256474 ATRAIDQ6UW56 229 aa12.14□□□□□ -0.47
VHL-201ENST00000256474 TRAPPC6BQ86SZ2 158 aa12.14□□□□□ -0.47
VHL-201ENST00000256474 CMIPQ8IY22 773 aa12.14□□□□□ -0.47
VHL-201ENST00000256474 TTC9Q92623 222 aa12.14□□□□□ -0.47
VHL-201ENST00000256474 PPA2Q9H2U2 334 aa12.14□□□□□ -0.47
VHL-201ENST00000256474 TRAV36DV7A0A075B6V5 113 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 OR2AT4A6NND4 320 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 HTR3BO95264 441 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 IL33O95760 270 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 PMPCAQ10713 525 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 BAMBIQ13145 260 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 ELOCQ15369 112 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 HDDC2Q7Z4H3 204 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 TMEM185AQ8NFB2 350 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 ZNF775Q96BV0 537 aaPredicted RBP12.13□□□□□ -0.47
VHL-201ENST00000256474 CDK2AP1O14519 115 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 ZNF749O43361 778 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 M6PRP20645 277 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 ABCD3P28288 659 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 SLC25A1P53007 311 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 PRSS12P56730 875 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 TLE3Q04726 772 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 IL10RAQ13651 578 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 CSRP2Q16527 193 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 NHLRC3Q5JS37 347 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 EXOSC6Q5RKV6 272 aaKnown RBP12.13□□□□□ -0.47
VHL-201ENST00000256474 ZNF684Q5T5D7 378 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 NUP54Q7Z3B4 507 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 ZBTB8AQ96BR9 441 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 FOXQ1Q9C009 403 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 PLEKHA1Q9HB21 404 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 ASF1BQ9NVP2 202 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 TAS2R8Q9NYW2 309 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 HHLA2Q9UM44 414 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 TEX51A0A1B0GUA7 166 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 SLC17A2O00624 439 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 GABRA1P14867 456 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 FBLP22087 321 aaKnown RBP12.13□□□□□ -0.47
VHL-201ENST00000256474 CDAP32320 146 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 DLSTP36957 453 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 NR0B2Q15466 257 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 INPP5JQ15735 1006 aaPredicted RBP12.13□□□□□ -0.47
VHL-201ENST00000256474 C9orf40Q8IXQ3 194 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 OR4D6Q8NGJ1 314 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 SCARB1Q8WTV0 552 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 ASB5Q8WWX0 329 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 CPNE2Q96FN4 548 aaPredicted RBP12.13□□□□□ -0.47
VHL-201ENST00000256474 PTGES2Q9H7Z7 377 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 KLRF1Q9NZS2 232 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 GSKIPQ9P0R6 139 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 MMP17Q9ULZ9 603 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 PHF3Q92576 2039 aaKnown RBP12.13□□□□□ -0.47
VHL-201ENST00000256474 PCDH15Q96QU1 1955 aa12.13□□□□□ -0.47
VHL-201ENST00000256474 OR5H14A6NHG9 310 aa12.12□□□□□ -0.47
VHL-201ENST00000256474 MPIG6BO95866 241 aa12.12□□□□□ -0.47
VHL-201ENST00000256474 GIMD1P0DJR0 217 aa12.12□□□□□ -0.47
VHL-201ENST00000256474 ACTBP60709 375 aa12.12□□□□□ -0.47
VHL-201ENST00000256474 ACTG1P63261 375 aa12.12□□□□□ -0.47
VHL-201ENST00000256474 IL13RA1P78552 427 aa12.12□□□□□ -0.47
VHL-201ENST00000256474 SLC9A3R2Q15599 337 aa12.12□□□□□ -0.47
VHL-201ENST00000256474 TMEM88Q6PEY1 159 aa12.12□□□□□ -0.47
VHL-201ENST00000256474 CCDC107Q8WV48 283 aa12.12□□□□□ -0.47
VHL-201ENST00000256474 PMM1Q92871 262 aa12.12□□□□□ -0.47
VHL-201ENST00000256474 SLC25A28Q96A46 364 aa12.12□□□□□ -0.47
VHL-201ENST00000256474 SEH1LQ96EE3 360 aa12.12□□□□□ -0.47
VHL-201ENST00000256474 SLC46A1Q96NT5 459 aa12.12□□□□□ -0.47
VHL-201ENST00000256474 VRK1Q99986 396 aaPredicted RBP12.12□□□□□ -0.47
VHL-201ENST00000256474 TMEM231Q9H6L2 316 aa12.12□□□□□ -0.47
VHL-201ENST00000256474 VSX1Q9NZR4 365 aaPredicted RBP12.12□□□□□ -0.47
VHL-201ENST00000256474 SUSD2Q9UGT4 822 aa12.12□□□□□ -0.47
VHL-201ENST00000256474 OR52A1Q9UKL2 312 aa12.12□□□□□ -0.47
VHL-201ENST00000256474 HS3ST3A1Q9Y663 406 aa12.12□□□□□ -0.47
VHL-201ENST00000256474 KCNMB2Q9Y691 235 aa12.12□□□□□ -0.47
VHL-201ENST00000256474 IGKV1D-43A0A0B4J1Z2 117 aa12.12□□□□□ -0.47
VHL-201ENST00000256474 TRBV5-5A0A0J9YX44 114 aa12.12□□□□□ -0.47
VHL-201ENST00000256474 ATP1B3P54709 279 aa12.12□□□□□ -0.47
VHL-201ENST00000256474 TAS2R19P59542 299 aa12.12□□□□□ -0.47
VHL-201ENST00000256474 MRPS21P82921 87 aaKnown RBP12.12□□□□□ -0.47
VHL-201ENST00000256474 KLHL24Q6TFL4 600 aa12.12□□□□□ -0.47
VHL-201ENST00000256474 SPICQ8N5J4 248 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms