RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 DMWDQ09019 674 aa17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 LHX8Q68G74 356 aa17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 FAM199XQ6PEV8 388 aaPredicted RBP17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 RFPL4BQ6ZWI9 263 aa17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 PKMYT1Q99640 499 aa17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 FAM212BQ9NTI7 297 aaPredicted RBP17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 PRELID3BQ9Y3B1 194 aa17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 YIF1AO95070 293 aa17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 SLC35D3Q5M8T2 416 aa17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 UBAC2Q8NBM4 344 aa17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 OR5M9Q8NGP3 310 aa17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 UCN3Q969E3 161 aa17.03■□□□□ 0.32
SMARCC1-201ENST00000254480 CSF3P09919 207 aa17.02■□□□□ 0.32
SMARCC1-201ENST00000254480 CDAP32320 146 aa17.02■□□□□ 0.32
SMARCC1-201ENST00000254480 BSGP35613 385 aa17.02■□□□□ 0.32
SMARCC1-201ENST00000254480 CAPZBP47756 277 aa17.02■□□□□ 0.32
SMARCC1-201ENST00000254480 CDONQ4KMG0 1287 aa17.02■□□□□ 0.32
SMARCC1-201ENST00000254480 AARDQ4LEZ3 155 aa17.02■□□□□ 0.32
SMARCC1-201ENST00000254480 CYHR1Q6ZMK1 362 aa17.02■□□□□ 0.32
SMARCC1-201ENST00000254480 MEX3AA1L020 520 aaKnown RBP17.02■□□□□ 0.32
SMARCC1-201ENST00000254480 EIF4EP06730 217 aaKnown RBP17.02■□□□□ 0.32
SMARCC1-201ENST00000254480 OR8U8P0C7N1 319 aa17.02■□□□□ 0.32
SMARCC1-201ENST00000254480 GSK3AP49840 483 aa17.02■□□□□ 0.32
SMARCC1-201ENST00000254480 HBG1P69891 147 aa17.02■□□□□ 0.32
SMARCC1-201ENST00000254480 HBG2P69892 147 aa17.02■□□□□ 0.32
SMARCC1-201ENST00000254480 TBX21Q9UL17 535 aa17.02■□□□□ 0.32
SMARCC1-201ENST00000254480 CACNA1SQ13698 1873 aa17.02■□□□□ 0.32
SMARCC1-201ENST00000254480 TRGV8A0A0C4DH27 118 aa17.02■□□□□ 0.32
SMARCC1-201ENST00000254480 TMEM235A6NFC5 223 aa17.02■□□□□ 0.32
SMARCC1-201ENST00000254480 IGLV3-25P01717 112 aa17.02■□□□□ 0.32
SMARCC1-201ENST00000254480 OR10J4P0C629 311 aa17.02■□□□□ 0.32
SMARCC1-201ENST00000254480 HNF1AP20823 631 aa17.02■□□□□ 0.32
SMARCC1-201ENST00000254480 TCTN3Q6NUS6 607 aa17.02■□□□□ 0.32
SMARCC1-201ENST00000254480 TMEM179BQ7Z7N9 219 aa17.02■□□□□ 0.32
SMARCC1-201ENST00000254480 SHARPINQ9H0F6 387 aa17.02■□□□□ 0.32
SMARCC1-201ENST00000254480 GPR84Q9NQS5 396 aa17.02■□□□□ 0.32
SMARCC1-201ENST00000254480 KCNG2Q9UJ96 466 aa17.02■□□□□ 0.32
SMARCC1-201ENST00000254480 OR13C7P0DN81 318 aa17.02■□□□□ 0.31
SMARCC1-201ENST00000254480 RAB11AP62491 216 aa17.02■□□□□ 0.31
SMARCC1-201ENST00000254480 DGCR2P98153 550 aa17.02■□□□□ 0.31
SMARCC1-201ENST00000254480 PRSS36Q5K4E3 855 aa17.02■□□□□ 0.31
SMARCC1-201ENST00000254480 PLPP6Q8IY26 295 aa17.02■□□□□ 0.31
SMARCC1-201ENST00000254480 PSD2Q9BQI7 771 aa17.02■□□□□ 0.31
SMARCC1-201ENST00000254480 MRPL22Q9NWU5 206 aaKnown RBP17.02■□□□□ 0.31
SMARCC1-201ENST00000254480 URGCP-MRPS24S4R325 110 aa17.02■□□□□ 0.31
SMARCC1-201ENST00000254480 OR6C76A6NM76 312 aa17.02■□□□□ 0.31
SMARCC1-201ENST00000254480 GABARAPH6UMI1 98 aa17.02■□□□□ 0.31
SMARCC1-201ENST00000254480 GABARAPO95166 117 aa17.02■□□□□ 0.31
SMARCC1-201ENST00000254480 SMAD4Q13485 552 aaKnown RBP17.02■□□□□ 0.31
SMARCC1-201ENST00000254480 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.02■□□□□ 0.31
SMARCC1-201ENST00000254480 ZNF620Q6ZNG0 422 aa17.02■□□□□ 0.31
SMARCC1-201ENST00000254480 FAM185AQ8N0U4 392 aa17.02■□□□□ 0.31
SMARCC1-201ENST00000254480 UHRF2Q96PU4 802 aa17.02■□□□□ 0.31
SMARCC1-201ENST00000254480 PRRG2O14669 202 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 SNRPGP62308 76 aaKnown RBP17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 FOXC1Q12948 553 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 LYSMD2Q8IV50 215 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 INTS12Q96CB8 462 aaKnown RBP17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 KIRREL1Q96J84 757 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 EDEM2Q9BV94 578 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 ARV1Q9H2C2 271 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 IL21Q9HBE4 155 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 NUP205Q92621 2012 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 B4GALT1P15291 398 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 SDHAP31040 664 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 ISL1P61371 349 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 YBX1P67809 324 aaKnown RBP17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 SLC23A1Q9UHI7 598 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 RP1L1Q8IWN7 2480 aaPredicted RBP17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 SCGB1D1O95968 90 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 SEMG1P04279 462 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 RHNO1Q9BSD3 238 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 PATZ1Q9HBE1 687 aaKnown RBP17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 OSGIN2Q9Y236 505 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 SLCO1B1Q9Y6L6 691 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 DVL1O14640 695 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 RBP2P50120 134 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 FABP6P51161 128 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 DVL1P1P54792 670 aaPredicted RBP17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 BAMBIQ13145 260 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 KCNIP4Q6PIL6 250 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 ISG20L2Q9H9L3 353 aaKnown RBP17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 SSUH2Q9Y2M2 353 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 ETV7Q9Y603 341 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 hCG_1809904A0A1W2PP81 198 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 A0A1W2PPE2 198 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 A0A1W2PR64 198 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 A0A1W2PRV1 198 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 WDR1O75083 606 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 ZDHHC11BP0C7U3 371 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 MNX1P50219 401 aaPredicted RBP17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 GNB2P62879 340 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 NKAIN3Q8N8D7 197 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 OR52N5Q8NH56 324 aa17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 COL16A1Q07092 1604 aaPredicted RBP17.01■□□□□ 0.31
SMARCC1-201ENST00000254480 SYT6Q5T7P8 510 aaPredicted RBP17■□□□□ 0.31
SMARCC1-201ENST00000254480 DOK3Q7L591 496 aa17■□□□□ 0.31
SMARCC1-201ENST00000254480 ZNF439Q8NDP4 499 aa17■□□□□ 0.31
SMARCC1-201ENST00000254480 SLC30A7Q8NEW0 376 aa17■□□□□ 0.31
SMARCC1-201ENST00000254480 PLA2G3Q9NZ20 509 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms