RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 HCAR1Q9BXC0 346 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 HOXB1P14653 301 aaPredicted RBP9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 PPP3CBP16298 524 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 ELFN2Q5R3F8 820 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 SLC25A47Q6Q0C1 308 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 LRRN1Q6UXK5 716 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 FGD2Q7Z6J4 655 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 P2RY8Q86VZ1 359 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 FTMTQ8N4E7 242 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 HAVCR2Q8TDQ0 301 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 HSD17B8Q92506 261 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 RNASE6Q93091 150 aaKnown RBP9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 OBP2BQ9NPH6 170 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 CKLFQ9UBR5 152 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 ATP23Q9Y6H3 246 aa9.8□□□□□ -0.84
TNFAIP3-201ENST00000237289 METTL15A6NJ78 407 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 MAGEB3O15480 346 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 HNRNPCP07910 306 aaKnown RBP eCLIP9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 CST2P09228 141 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 BMP4P12644 408 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 CEACAM8P31997 349 aaPredicted RBP9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 SLC3A1Q07837 685 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 RAB39AQ14964 217 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 OR1K1Q8NGR3 316 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 SPRYD4Q8WW59 207 aaPredicted RBP9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 LGALS12Q96DT0 336 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 MALT1Q9UDY8 824 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 GPR160Q9UJ42 338 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 ING1Q9UK53 422 aaPredicted RBP9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 GSTK1Q9Y2Q3 226 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 NKX2-6A6NCS4 301 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 OR6C6A6NF89 314 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 ZNF20P17024 532 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 RPS23P62266 143 aaKnown RBP9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 TIMM50Q3ZCQ8 353 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 PABPC1L2AQ5JQF8 200 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 KLBQ86Z14 1044 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 IL17RDQ8NFM7 739 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 GATAD2BQ8WXI9 593 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 NKIRAS2Q9NYR9 191 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 ZNF432O94892 652 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 KIR2DL3P43628 341 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 FXYD6P3P58550 94 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 MRPL28Q13084 256 aaKnown RBP9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 FAM27BQ5VT28 67 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 AADACL4Q5VUY2 407 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 RTL6Q6ICC9 239 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 LILRB4Q8NHJ6 448 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 ZNF835Q9Y2P0 537 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 POLEQ07864 2286 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 TRBV2A0A0J9YWF9 115 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 RER1O15258 196 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 MT-ND2P03891 347 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 HCCSP53701 268 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 CDH15P55291 814 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 MVKQ03426 396 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 FAM57BQ71RH2 274 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 TMEM123Q8N131 208 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 OR1F12Q8NHA8 337 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 S100PBPQ96BU1 408 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 C4orf36Q96KX1 117 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 WACQ9BTA9 647 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 BATF3Q9NR55 127 aa9.79□□□□□ -0.84
TNFAIP3-201ENST00000237289 SPTAN1Q13813 2472 aaKnown RBP9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 A8MXE2 369 aa9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 H3BSH0 61 aa9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 MTRF1O75570 445 aaKnown RBP9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 HRGP04196 525 aa9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 S100A13Q99584 98 aa9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 ABHD6Q9BV23 337 aa9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 RALYQ9UKM9 306 aaKnown RBP9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 DMXL1Q9Y485 3027 aa9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 A0A1W2PPW3 197 aa9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 A1L4Q6 167 aa9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 GABARAPL2P60520 117 aa9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 RAB35Q15286 201 aa9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 SPHARQ15513 63 aa9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 C10orf128Q5T292 105 aa9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 PRSS48Q7RTY5 328 aa9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 C17orf78Q8N4C9 275 aa9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 SLC30A7Q8NEW0 376 aa9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 OR52I1Q8NGK6 324 aa9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 OTOSQ8NHW6 89 aa9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 MRPS26Q9BYN8 205 aaKnown RBP9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 PSORS1C1Q9UIG5 152 aa9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 DUSP13Q9UII6 198 aa9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 M0R135 149 aa9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 ZNF254O75437 659 aa9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 CDK1P06493 297 aa9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 CD3EP07766 207 aa9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 COX6B1P14854 86 aa9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 CELP19835 753 aa9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 IGHV1-2P23083 117 aa9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 PSMA1P25786 263 aaKnown RBP9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 RAD52P43351 418 aa9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 ZNF774Q6NX45 483 aa9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 ZNF704Q6ZNC4 412 aaPredicted RBP9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 KCTD8Q6ZWB6 473 aa9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 ABHD4Q8TB40 342 aa9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 ZNF799Q96GE5 643 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms