RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 FAM206AQ9NX38 181 aa17.04■□□□□ 0.32
YBX3-201ENST00000228251 HHLA2Q9UM44 414 aa17.04■□□□□ 0.32
YBX3-201ENST00000228251 RHBDD3Q9Y3P4 386 aa17.04■□□□□ 0.32
YBX3-201ENST00000228251 WDFY4Q6ZS81 3184 aa17.03■□□□□ 0.32
YBX3-201ENST00000228251 NSG1A0A0A6YYJ2 146 aa17.03■□□□□ 0.32
YBX3-201ENST00000228251 LOC101059948A0A1B0GTJ6 334 aa17.03■□□□□ 0.32
YBX3-201ENST00000228251 LOC107986453A0A1B0GWG9 222 aa17.03■□□□□ 0.32
YBX3-201ENST00000228251 ANKRD20A5PA0PJZ0 165 aa17.03■□□□□ 0.32
YBX3-201ENST00000228251 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.03■□□□□ 0.32
YBX3-201ENST00000228251 XRCC3O43542 346 aa17.03■□□□□ 0.32
YBX3-201ENST00000228251 ZIC3O60481 467 aa17.03■□□□□ 0.32
YBX3-201ENST00000228251 PMS2P2O95744 297 aa17.03■□□□□ 0.32
YBX3-201ENST00000228251 IGHEP01854 428 aa17.03■□□□□ 0.32
YBX3-201ENST00000228251 IGHG1P01857 330 aa17.03■□□□□ 0.32
YBX3-201ENST00000228251 MT-ND4P03905 459 aa17.03■□□□□ 0.32
YBX3-201ENST00000228251 MPLP40238 635 aa17.03■□□□□ 0.32
YBX3-201ENST00000228251 CCR6P51684 374 aa17.03■□□□□ 0.32
YBX3-201ENST00000228251 EFNB2P52799 333 aa17.03■□□□□ 0.32
YBX3-201ENST00000228251 RAB25P57735 213 aa17.03■□□□□ 0.32
YBX3-201ENST00000228251 MFAP5Q13361 173 aa17.03■□□□□ 0.32
YBX3-201ENST00000228251 SNTB2Q13425 540 aaKnown RBP17.03■□□□□ 0.32
YBX3-201ENST00000228251 KCNMB1Q16558 191 aa17.03■□□□□ 0.32
YBX3-201ENST00000228251 ZNF528Q3MIS6 628 aa17.03■□□□□ 0.32
YBX3-201ENST00000228251 TMEM176BQ3YBM2 270 aaPredicted RBP17.03■□□□□ 0.32
YBX3-201ENST00000228251 OLFML2AQ68BL7 652 aa17.03■□□□□ 0.32
YBX3-201ENST00000228251 TMPPEQ6ZT21 453 aa17.03■□□□□ 0.32
YBX3-201ENST00000228251 RPS19BP1Q86WX3 136 aaKnown RBP17.03■□□□□ 0.32
YBX3-201ENST00000228251 HRASLSQ9HDD0 168 aa17.03■□□□□ 0.32
YBX3-201ENST00000228251 AKAP7Q9P0M2 348 aaPredicted RBP17.03■□□□□ 0.32
YBX3-201ENST00000228251 LHFPL6Q9Y693 200 aa17.03■□□□□ 0.32
YBX3-201ENST00000228251 TRAV6A0A075B6T7 132 aa17.02■□□□□ 0.32
YBX3-201ENST00000228251 CIB4A0PJX0 185 aa17.02■□□□□ 0.32
YBX3-201ENST00000228251 GMDSO60547 372 aa17.02■□□□□ 0.32
YBX3-201ENST00000228251 ECDO95905 644 aaPredicted RBP17.02■□□□□ 0.32
YBX3-201ENST00000228251 SP9P0CG40 484 aa17.02■□□□□ 0.32
YBX3-201ENST00000228251 SFTPDP35247 375 aa17.02■□□□□ 0.32
YBX3-201ENST00000228251 CHAF1BQ13112 559 aa17.02■□□□□ 0.32
YBX3-201ENST00000228251 SF3B4Q15427 424 aaKnown RBP eCLIP17.02■□□□□ 0.323e-8■■■■■ 36.3
YBX3-201ENST00000228251 ZNF704Q6ZNC4 412 aaPredicted RBP17.02■□□□□ 0.32
YBX3-201ENST00000228251 OR51D1Q8NGF3 324 aa17.02■□□□□ 0.32
YBX3-201ENST00000228251 OR1J4Q8NGS1 313 aa17.02■□□□□ 0.32
YBX3-201ENST00000228251 C15orf40Q8WUR7 153 aa17.02■□□□□ 0.32
YBX3-201ENST00000228251 CAPSLQ8WWF8 208 aa17.02■□□□□ 0.32
YBX3-201ENST00000228251 SLAMF6Q96DU3 332 aa17.02■□□□□ 0.32
YBX3-201ENST00000228251 SPRY4Q9C004 299 aa17.02■□□□□ 0.32
YBX3-201ENST00000228251 SLC17A5Q9NRA2 495 aa17.02■□□□□ 0.32
YBX3-201ENST00000228251 TAS2R4Q9NYW5 299 aa17.02■□□□□ 0.32
YBX3-201ENST00000228251 KLK11Q9UBX7 282 aa17.02■□□□□ 0.32
YBX3-201ENST00000228251 GTF2A1LQ9UNN4 478 aa17.02■□□□□ 0.32
YBX3-201ENST00000228251 RCE1Q9Y256 329 aa17.02■□□□□ 0.32
YBX3-201ENST00000228251 NCKAP5O14513 1909 aa17.02■□□□□ 0.32
YBX3-201ENST00000228251 BDP1A6H8Y1 2624 aa17.02■□□□□ 0.32
YBX3-201ENST00000228251 TMEM269A0A1B0GVZ9 245 aa17.02■□□□□ 0.31
YBX3-201ENST00000228251 LOC390937A0A1W2PQ73 354 aa17.02■□□□□ 0.31
YBX3-201ENST00000228251 ACOT7O00154 380 aa17.02■□□□□ 0.31
YBX3-201ENST00000228251 MASP2O00187 686 aa17.02■□□□□ 0.31
YBX3-201ENST00000228251 STK17BO94768 372 aa17.02■□□□□ 0.31
YBX3-201ENST00000228251 DHFRP00374 187 aa17.02■□□□□ 0.31
YBX3-201ENST00000228251 CD2P06729 351 aa17.02■□□□□ 0.31
YBX3-201ENST00000228251 POU3F4P49335 361 aa17.02■□□□□ 0.31
YBX3-201ENST00000228251 DSCR4P56555 118 aaPredicted RBP17.02■□□□□ 0.31
YBX3-201ENST00000228251 SLC35A1P78382 337 aa17.02■□□□□ 0.31
YBX3-201ENST00000228251 CAMK2DQ13557 499 aa17.02■□□□□ 0.31
YBX3-201ENST00000228251 ELFN2Q5R3F8 820 aa17.02■□□□□ 0.31
YBX3-201ENST00000228251 ZNF468Q5VIY5 522 aaPredicted RBP17.02■□□□□ 0.31
YBX3-201ENST00000228251 TIPARPQ7Z3E1 657 aaKnown RBP17.02■□□□□ 0.31
YBX3-201ENST00000228251 HDDC2Q7Z4H3 204 aa17.02■□□□□ 0.31
YBX3-201ENST00000228251 FCAMRQ8WWV6 532 aa17.02■□□□□ 0.31
YBX3-201ENST00000228251 FAM3DQ96BQ1 224 aa17.02■□□□□ 0.31
YBX3-201ENST00000228251 NIPAL2Q9H841 368 aa17.02■□□□□ 0.31
YBX3-201ENST00000228251 LOC100289279A0A1B0GTE1 492 aa17.01■□□□□ 0.31
YBX3-201ENST00000228251 NAP1L6A6NFF2 107 aa17.01■□□□□ 0.31
YBX3-201ENST00000228251 M0R296 226 aa17.01■□□□□ 0.31
YBX3-201ENST00000228251 CTAG2O75638 210 aa17.01■□□□□ 0.31
YBX3-201ENST00000228251 C1QBP02746 253 aa17.01■□□□□ 0.31
YBX3-201ENST00000228251 YES1P07947 543 aa17.01■□□□□ 0.31
YBX3-201ENST00000228251 H2BFMP0C1H6 154 aa17.01■□□□□ 0.31
YBX3-201ENST00000228251 UBCP0CG48 685 aaKnown RBP17.01■□□□□ 0.31
YBX3-201ENST00000228251 PTHLHP12272 177 aa17.01■□□□□ 0.31
YBX3-201ENST00000228251 GZMKP49863 264 aa17.01■□□□□ 0.31
YBX3-201ENST00000228251 CLRN1P58418 232 aa17.01■□□□□ 0.31
YBX3-201ENST00000228251 Q0VFX4 171 aa17.01■□□□□ 0.31
YBX3-201ENST00000228251 CDK10Q15131 360 aa17.01■□□□□ 0.31
YBX3-201ENST00000228251 TOMM20Q15388 145 aa17.01■□□□□ 0.31
YBX3-201ENST00000228251 RAB11BQ15907 218 aa17.01■□□□□ 0.31
YBX3-201ENST00000228251 GSG1Q2KHT4 349 aa17.01■□□□□ 0.31
YBX3-201ENST00000228251 DCAF12Q5T6F0 453 aa17.01■□□□□ 0.31
YBX3-201ENST00000228251 TMEM244Q5VVB8 128 aa17.01■□□□□ 0.31
YBX3-201ENST00000228251 CFAP77Q6ZQR2 320 aa17.01■□□□□ 0.31
YBX3-201ENST00000228251 TMEM41AQ96HV5 264 aa17.01■□□□□ 0.31
YBX3-201ENST00000228251 GNRHR2Q96P88 292 aa17.01■□□□□ 0.31
YBX3-201ENST00000228251 OR2M2Q96R28 347 aa17.01■□□□□ 0.31
YBX3-201ENST00000228251 ARRDC1-AS1Q9H2J1 176 aa17.01■□□□□ 0.31
YBX3-201ENST00000228251 LOXL2Q9Y4K0 774 aa17.01■□□□□ 0.31
YBX3-201ENST00000228251 PMS2P1A4D2B8 440 aa17■□□□□ 0.31
YBX3-201ENST00000228251 FAM172BPA6NC97 362 aa17■□□□□ 0.31
YBX3-201ENST00000228251 SULT2B1O00204 365 aa17■□□□□ 0.31
YBX3-201ENST00000228251 LDLRAD4O15165 306 aa17■□□□□ 0.31
YBX3-201ENST00000228251 TTRP02766 147 aa17■□□□□ 0.31
YBX3-201ENST00000228251 CD63P08962 238 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms