RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 MPDZO75970 2070 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 PLPP2O43688 288 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 PIP5K1CO60331 668 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 EPXP11678 715 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 CEBPBP17676 345 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 EPHA1P21709 976 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 PTAFRP25105 342 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 APEX1P27695 318 aaKnown RBP4.04□□□□□ -1.76
CHD9-201ENST00000219084 SHC1P29353 583 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 BLVRBP30043 206 aaPredicted RBP4.04□□□□□ -1.76
CHD9-201ENST00000219084 IL2RGP31785 369 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 PTGER4P35408 488 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 MDH2P40926 338 aaKnown RBP4.04□□□□□ -1.76
CHD9-201ENST00000219084 SLC6A11P48066 632 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 CCR5P51681 352 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 RPS18P62269 152 aaKnown RBP4.04□□□□□ -1.76
CHD9-201ENST00000219084 BTG2P78543 158 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 ACOT6Q3I5F7 207 aaPredicted RBP4.04□□□□□ -1.76
CHD9-201ENST00000219084 TMEM128Q5BJH2 165 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 TRAT1Q6PIZ9 186 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 DPPA3Q6W0C5 159 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 GDPD3Q7L5L3 318 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 SSX9Q7RTT3 188 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 KLHDC9Q8NEP7 349 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 PINX1Q96BK5 328 aaKnown RBP4.04□□□□□ -1.76
CHD9-201ENST00000219084 PCED1AQ9H1Q7 454 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 SLC6A17Q9H1V8 727 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 GALNT9Q9HCQ5 603 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 THAP10Q9P2Z0 257 aaPredicted RBP4.04□□□□□ -1.76
CHD9-201ENST00000219084 SLC23A2Q9UGH3 650 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 PIGLQ9Y2B2 252 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 PPIL1Q9Y3C6 166 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 FAM96BQ9Y3D0 163 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 FRG2CA6NGY1 282 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 ZNF705GA8MUZ8 300 aaPredicted RBP4.04□□□□□ -1.76
CHD9-201ENST00000219084 RAD1O60671 282 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 MRPL33O75394 65 aaKnown RBP4.04□□□□□ -1.76
CHD9-201ENST00000219084 HOXA1P49639 335 aaPredicted RBP4.04□□□□□ -1.76
CHD9-201ENST00000219084 EXOSC7Q15024 291 aaKnown RBP4.04□□□□□ -1.76
CHD9-201ENST00000219084 MEP1BQ16820 701 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 USP53Q70EK8 1073 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 TMPRSS7Q7RTY8 843 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 PPP1R3BQ86XI6 285 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 METTL27Q8N6F8 245 aaPredicted RBP4.04□□□□□ -1.76
CHD9-201ENST00000219084 ST8SIA4Q92187 359 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 MS4A6EQ96DS6 147 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 SAT2Q96F10 170 aaPredicted RBP4.04□□□□□ -1.76
CHD9-201ENST00000219084 MRGPRX4Q96LA9 322 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 BCO1Q9HAY6 547 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 RAB18Q9NP72 206 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 CSAG2Q9Y5P2 127 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 NSG1A0A0A6YYJ2 146 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 PRSS23O95084 383 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 F11P03951 625 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 GP1BAP07359 652 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 PTHLHP12272 177 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 APEHP13798 732 aaKnown RBP4.04□□□□□ -1.76
CHD9-201ENST00000219084 KIR2DS2P43631 304 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 CCR6P51684 374 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 HSF1Q00613 529 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 COL13A1Q5TAT6 717 aaPredicted RBP4.04□□□□□ -1.76
CHD9-201ENST00000219084 TMEM207Q6UWW9 146 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 SGCZQ96LD1 299 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 TEX37Q96LM6 180 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 EDEM2Q9BV94 578 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 RBM38Q9H0Z9 239 aaKnown RBP4.04□□□□□ -1.76
CHD9-201ENST00000219084 PLXNA3P51805 1871 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 A0A0B4J2A0 478 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 XKRY2A2RUG3 117 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 B4DEV8 164 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 H3BSH0 61 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 MPPED1O15442 326 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 CHRM4P08173 479 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 ZNF44P15621 663 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 BCL6P41182 706 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 BPIFB3P59826 476 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 RAC1P63000 192 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 FZD2Q14332 565 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 NNATQ16517 81 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 ZNF425Q6IV72 752 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 ZNF573Q86YE8 665 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 GABRG1Q8N1C3 465 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 TTC9BQ8N6N2 239 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 SLC38A9Q8NBW4 561 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 NAXEQ8NCW5 288 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 OR51S1Q8NGJ8 323 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 TMEM18Q96B42 140 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 TNFRSF13CQ96RJ3 184 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 BARHL1Q9BZE3 327 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 NTN4Q9HB63 628 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 HRASLSQ9HDD0 168 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 SHPKQ9UHJ6 478 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 CD207Q9UJ71 328 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 GABRQQ9UN88 632 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 IGLV3-16A0A075B6K0 115 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 PRAMEF25A6NGN4 478 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 NKX6-3A6NJ46 265 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 NPIPB8E9PQR5 432 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 H3BML4 177 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 MAGEB4O15481 346 aaPredicted RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms