RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Acsf3Q3URE1 583 aa18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Olfr332Q5NC45 344 aa18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Cfap161Q6P8Y0 303 aa18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Gm13757Q7TR17 305 aa18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Klhl25Q8R2P1 589 aa18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Olfr826Q8VFU6 313 aa18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Olfr825Q8VFU7 320 aa18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Plpp7Q91WB2 271 aa18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Thumpd1Q99J36 350 aaKnown RBP18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 P2ry4Q9JJS7 361 aa18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Fbn2Q61555 2907 aa18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 2610044O15Rik8A0A087WRJ1 410 aa18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Gm28576A0A087WRP6 222 aa18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Olfr65A0A1B0GSF4 315 aa18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Klhl15A2AAX3 604 aa18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Vmn1r152E9Q9N3 307 aa18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Gm8871F7AXK2 190 aa18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Vmn1r104L7N293 307 aa18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Rps3aP97351 264 aaKnown RBP18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Olfr11Q60890 313 aa18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 SelenoiQ80TA1 398 aa18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Rxfp3Q8BGE9 472 aa18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Nsun3Q8CCT7 348 aa18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 4933402N03RikQ8CDT9 329 aa18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Olfr1261Q8VFB0 306 aa18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Olfr56Q8VGD6 315 aa18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Slc7a12Q8VIE6 465 aa18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 As3mtQ91WU5 376 aa18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Smurf1Q9CUN6 731 aa18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Med29Q9DB91 199 aa18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Slc38a3Q9DCP2 505 aa18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Orc5Q9WUV0 435 aa18.94■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Gm43517E9PYS1 339 aa18.93■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 GrnP28798 589 aaKnown RBP18.93■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 GifP52787 417 aa18.93■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 EgflamQ4VBE4 1017 aa18.93■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Ipcef1Q5DU31 406 aa18.93■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Csnk2a1Q60737 391 aaKnown RBP18.93■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Rgp1Q8BHT7 391 aa18.93■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Zbtb20Q8K0L9 741 aa18.93■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Olfr24Q8VFM9 313 aa18.93■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Dcp1aQ91YD3 602 aa18.93■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Gdpd1Q9CRY7 314 aa18.93■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Gabra4Q9D6F4 552 aa18.93■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Gstk1Q9DCM2 226 aa18.93■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Tmem27Q9ESG4 222 aa18.93■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Ahctf1Q8CJF7 2243 aaKnown RBP18.92■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Rasgef1aA0A0N4SVR5 498 aa18.92■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Slc25a25A2ASZ8 469 aa18.92■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Mbl2P41317 244 aa18.92■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Vipr2P41588 437 aa18.92■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Acta2P62737 377 aaKnown RBP18.92■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Actg2P63268 376 aa18.92■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Nos3P70313 1202 aa18.92■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Cass4Q08EC4 804 aa18.92■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 PilraQ2YFS3 302 aa18.92■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Fam181bQ80VF6 417 aa18.92■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Mogat2Q80W94 334 aa18.92■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Bcdin3dQ91YP1 285 aa18.92■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Rad51cQ924H5 366 aa18.92■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Dimt1Q9D0D4 313 aaKnown RBP18.92■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Cpn2Q9DBB9 547 aa18.92■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Ch25hQ9Z0F5 298 aa18.92■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 FryE9Q8I9 3020 aa18.92■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Apc2Q9Z1K7 2274 aa18.92■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Rhox2bA2A447 191 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Lao1B1ARV3 523 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 BckdkO55028 412 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Ccl22O88430 92 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Nme1P15532 152 aaKnown RBP18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Sox6P40645 827 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Capza2P47754 286 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Gabrb1P50571 474 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Crabp1P62965 137 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Cpeb1P70166 561 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 ElaneQ3UP87 265 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 NppcQ61839 126 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Arhgef4Q7TNR9 484 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Znf787Q8BIF9 381 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Slc22a12Q8CFZ5 553 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Babam2Q8K3W0 383 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Abhd17cQ8VCV1 320 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 MrgprgQ91ZB5 289 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Eif1bQ9CXU9 113 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Neurl2Q9D0S4 285 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 AcacbE9Q4Z2 2448 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Olfr547E9PXN3 311 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Gm17174M0QWQ9 212 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 CrygsO35486 178 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Cops3O88543 423 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Cdk1P11440 297 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Ctla2aP12399 137 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Has2P70312 552 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 H3f3aP84244 136 aaKnown RBP18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Fam187bQ0VAY3 358 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Gm7534Q3UU21 679 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Fblim1Q71FD7 375 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Olfr851Q7TRG0 312 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Pif1Q80SX8 650 aa18.91■□□□□ 0.62
Ccdc88a-202ENSMUST00000109477 Mblac1Q8BWY4 260 aa18.91■□□□□ 0.62
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms