RNA–Protein interactions for RNA: ENSMUST00000094951.9

Scn1a-202, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn1a, Length 5,946 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-202ENSMUST00000094951 Slc22a12Q8CFZ5 553 aa6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Slc25a28Q8R0Z5 364 aa6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Olfr1384Q8VFA8 318 aa6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Isoc1Q91V64 297 aa6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Cmss1Q9CZT6 276 aaKnown RBP6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 GrinaQ9ESF4 345 aa6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Clcf1Q9QZM3 225 aa6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Padi1Q9Z185 662 aa6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Ighv1-42A0A0A6YY38 117 aa6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Olfr576A0A0G2JFH3 312 aa6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Olfr1375A0A0N4SUP0 313 aa6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Gm5678A0A1B0GRG8 277 aa6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Olfr1130A0A1L1SQT2 314 aa6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Olfr1129A2AV41 314 aa6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Gm20547B8JJN0 1276 aa6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Aldh3b2E9Q3E1 479 aa6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Vmn1r121K7N6J4 314 aa6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Slc18a3O35304 530 aa6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Mfsd12Q3U481 476 aa6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Pin1rt1Q3ULQ2 159 aa6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Q5SPV6 233 aa6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Gm5447Q8BPB2 115 aa6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 SheQ8BSD5 492 aa6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Mmgt2Q8R3L0 123 aa6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Olfr935Q8VG16 308 aa6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Fitm1Q91V79 292 aa6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Tmem246Q91YV9 403 aa6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Znf639Q99KZ6 485 aa6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Msmo1Q9CRA4 293 aa6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Zbtb8aQ9CWH1 434 aa6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Idh3aQ9D6R2 366 aaKnown RBP6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Znf638Q61464 1960 aaKnown RBP6.5□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Gm16432A0A0A6YXX9 775 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Gm5141A0A0J9YUW3 581 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Rpl23a-ps3A0A140T8M7 156 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Gm30302A0A1Y7VN40 1110 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Vmn1r180B9EK86 305 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Hoxd11P23813 323 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Sstr2P30875 369 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Rpl27P61358 136 aaKnown RBP6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Rpl23aP62751 156 aaKnown RBP6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Arf1P84078 181 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Fstl4Q5STE3 841 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Scgb2b2Q6UGQ3 114 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Mboat1Q8BH98 492 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Cd99l2Q8BIF0 237 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 F830045P16RikQ8BJ95 487 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Arf2Q8BSL7 181 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Slc35f4Q8BZK4 485 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Tmem163Q8C996 288 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Henmt1Q8CAE2 395 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Olfr1277Q8VF41 303 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 S1pr5Q91X56 400 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Cdca4Q9CWM2 237 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Acer3Q9D099 267 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Tex43Q9D9I1 141 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Q9DAY5 185 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Chst1Q9EQC0 411 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 FastkQ9JIX9 511 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Cpn1Q9JJN5 457 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Olfr663A0A1B0GSI9 319 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Scgb1b30A2BH64 92 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 RbpjlO08674 515 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Klkb1P26262 638 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Rab11aP62492 216 aaKnown RBP6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Cntnap5bQ0V8T8 1292 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Rnf223Q3UV31 285 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Gas6Q61592 674 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Olfr851Q7TRG0 312 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Mab21l2Q8BPP1 359 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Banf2Q8BVR0 90 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Itpk1Q8BYN3 419 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 4930451G09RikQ8C5G4 195 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Neurl3Q8CJC5 254 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Olfr1461Q8VEV7 312 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Olfr1261Q8VFB0 306 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Olfr969Q8VG89 311 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Olfr1052Q8VGR8 312 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Rpl7l1Q9D8M4 246 aaKnown RBP6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Tnfsf14Q9QYH9 239 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Slc37a2Q9WU81 501 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Igkv6-20A0A140T8P2 115 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Fthl17bA2AHC5 176 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Fthl17cA2AHC6 176 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Olfr1247A2AT78 314 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Olfr1249L7MU51 318 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Sh2b3O09039 548 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Il6raP22272 460 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Fosl1P48755 273 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Cxcl5P50228 132 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Lbx1P52955 282 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Kcng3P59053 433 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Tas2r41P59532 308 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Slc35f3Q1LZI2 421 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Fthl17dQ3SXD1 176 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Fthl17fQ3SXD2 176 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Gm21093Q6GQS8 569 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Fam57bQ7TNV1 275 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Slco4c1Q8BGD4 722 aa6.49□□□□□ -1.37
Scn1a-202ENSMUST00000094951 Rrnad1Q8BZG5 475 aa6.49□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 42.5 ms