RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Ykt6Q9CQW1 198 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Cnih4Q9CX13 139 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Cfap44E9Q5M6 1843 aa9.39□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Arl16B1ATY8 173 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 EdaO54693 391 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Gstm2P15626 218 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Dnajc5P60904 198 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Eif4eP63073 217 aaKnown RBP9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 AmbpQ07456 349 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 SctQ08535 133 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Gpr160Q3U3F9 336 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Inca1Q6PKN7 231 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Pex12Q8VC48 359 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Fam174aQ9D3L0 190 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Il21rQ9JHX3 529 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Nxt1Q9QZV9 140 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Ankrd60A2AMD2 318 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Trabd2bB1ATG9 517 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Gm6569D3YTM9 175 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Cyp1a2P00186 513 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 HbzP06467 142 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 LplP11152 474 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 H2-T3P14432 384 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Bmi1P25916 324 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Gdf7P43029 461 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Tacr3P47937 452 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 SgcbP82349 320 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Ubxn2bQ0KL01 331 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Klf4Q60793 483 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Gm21093Q6GQS8 569 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Olfr32Q7TQZ0 308 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Olfr361Q8VF16 322 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Smad6O35182 495 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 CfpP11680 464 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Mcpt2P15119 244 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Elavl1P70372 326 aaKnown RBP9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 ElocP83940 112 aaKnown RBP9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Zfp729aQ4QQP3 973 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 ErasQ7TN89 227 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Olfr1491Q8VEZ5 319 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Olfr837Q8VFJ4 312 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Olfr713Q920G5 324 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Sorcs2Q9EPR5 1159 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 E9Q0B3 247 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Vmn1r57K7N731 310 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Gpr83P30731 423 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Meox2P32443 303 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Gpr85P60894 370 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Dcaf7P61963 342 aaKnown RBP9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Dync2li1Q8K0T2 351 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Mpped2Q9CZJ0 294 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Cx3cr1Q9Z0D9 354 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Col22a1E9Q7P1 1613 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 P01810 119 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 RorcP51450 516 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Pax6P63015 422 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Cd3eapQ76KJ5 399 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Olfr1135Q7TR42 310 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Slc22a20Q80UJ1 556 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Cpne4Q8BLR2 557 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Tm6sf2Q8R1J1 378 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Olfr434Q8VF17 321 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Dusp7Q91Z46 422 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Fam210bQ9D8B6 190 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Fn3kQ9ER35 309 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Cpn1Q9JJN5 457 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Pmm2Q9Z2M7 242 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Nwd2Q6P5U7 1742 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Vmn1r152E9Q9N3 307 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Vmn1r104L7N293 307 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Wsb2O54929 404 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Rab3dP35276 219 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Ackr3P56485 362 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 InhbbQ04999 411 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Gpr15Q0VDU3 360 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 MamstrQ0ZCJ7 421 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Ube2fbQ3UWQ3 185 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Slc22a14Q497L9 629 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Fam173aQ501J2 229 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Taar2Q5QD17 339 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Zfp663Q6NXM6 656 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Klhl13Q80TF4 654 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Tbl1xr1Q8BHJ5 514 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Ddit4lQ8VHZ5 193 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Taf9Q8VI33 264 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Sucnr1Q99MT6 317 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Mfsd4b2Q9D8I5 366 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Sipa1l2Q80TE4 1722 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Chst13D3Z6E3 336 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 C2cd6E9Q152 557 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Vmn2r66K7N6R9 851 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Vmn2r58K7N6V2 862 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Vmn1r169L7N275 304 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 AanatO88816 205 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 N4bp2l1Q3V2Q8 238 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Olfr1113Q7TR54 326 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 CslQ80X68 466 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 JkampQ8BI36 311 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Olfr1412Q8VET3 321 aa9.38□□□□□ -0.91
Ubr1-201ENSMUST00000028728 Oasl1Q8VI94 511 aa9.38□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms