RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Adam12Q61824 903 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 Tdpoz5Q6YCH1 340 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 Fam212bQ80VY2 300 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 F830045P16RikQ8BJ95 487 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 Gm9938Q8C3P5 112 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 CthQ8VCN5 398 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 Olfr1484Q8VEU6 315 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 Olfr1395Q8VGD7 317 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 LipfQ9CPP7 395 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 1700034E13RikQ9D2T6 108 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 Adam28Q9JLN6 793 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 Pde7bQ9QXQ1 446 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 Gm17728E9Q5K2 132 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 Fpr-s1O08790 351 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 Sec61a1P61620 476 aaKnown RBP14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 Csf2raQ00941 388 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 DbpQ60925 325 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 Spin2cQ6NVE3 257 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 Frg2f1Q6P3A2 227 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 Olfr1133Q7TR44 313 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 TpbpbQ9CQC0 121 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 Mrps24Q9CQV5 167 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 Nol3Q9D1X0 220 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 Tmem38bQ9DAV9 292 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 CalcrlQ9R1W5 463 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 Pcnx3Q8VI59 2028 aa14.76□□□□□ -0.05
Trim28-201ENSMUST00000005705 Omt2aF6ZJR3 104 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Gm3033M0QWI0 180 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Il2raP01590 268 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Anxa2P07356 339 aaKnown RBP14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Agtr1aP29754 359 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Rps15aP62245 130 aaKnown RBP14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Slc16a11Q5NC32 447 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Hes3Q61657 175 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 SpicQ6P3D7 242 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 H2-M10.5Q85ZW7 330 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 FRRS1Q8K385 592 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Thap7Q8VCZ3 309 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Olfr799Q8VGI7 311 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Q99K99 313 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Cldnd1Q9CQX5 253 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 NmbQ9CR53 121 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Ccdc167Q9D162 97 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Sult1c2Q9D939 296 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Hacd4A2AKM2 232 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Gm12666A2AMD0 254 aaKnown RBP14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Gm12789B1AUV7 164 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Vmn2r80E9Q1L0 863 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Gm5407E9Q7Q1 248 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Klf9O35739 244 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 NodalP43021 354 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Cass4Q08EC4 804 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Ccdc69Q3TCJ8 202 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Dyrk1aQ61214 763 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 AstlQ6HA09 435 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Olfr1106Q7TR57 312 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Sec22aQ8BH47 307 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Olfr1504Q8VFQ4 315 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Mrto4Q9D0I8 239 aaKnown RBP14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Gm3952A0A0A6YXJ1 191 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Igkv12-44A0A140T8M2 115 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 FstP47931 344 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Acyp2P56375 106 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Tmprss9P69525 1065 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 H2-Eb2Q3UUV9 287 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Cd55Q61475 390 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Gas6Q61592 674 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Phf21aQ6ZPK0 659 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Tas2r40Q7TQB8 319 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Ap3s2Q8BSZ2 193 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Pamr1Q8BU25 720 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Mrgprb3Q91ZC1 312 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Ubox5Q925F4 539 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Lpcat2bQ9D5U0 516 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Kiaa0141Q9DCV6 510 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Gk2Q9WU65 554 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Slc22a5Q9Z0E8 557 aa14.75□□□□□ -0.05
Trim28-201ENSMUST00000005705 Olfr663A0A1B0GSI9 319 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Olfr547E9PXN3 311 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 BC117090L7N257 96 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Ppt2O35448 302 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Abcd4O89016 606 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Actc1P68033 377 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Acta1P68134 377 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Col10a1Q05306 680 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Lrrc28Q3TX51 367 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Adgrg5Q3V3Z3 524 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Gm14851Q5ERJ0 116 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Spata2lQ8BNN1 426 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Tmem242Q8VCR3 140 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Olfr347Q8VGK2 312 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Sfxn5Q925N0 342 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Tktl1Q99MX0 595 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Sgo1Q9CXH7 517 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Jmjd6Q9ERI5 403 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Cav2Q9WVC3 162 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Plxnd1Q3UH93 1925 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Ldlrad1D3YYZ1 218 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Vmn2r34E9PVI0 852 aa14.74□□□□□ -0.05
Trim28-201ENSMUST00000005705 Vmn2r37F8VQD3 802 aa14.74□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 51 ms