RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 ZNF468Q5VIY5 522 aaPredicted RBP15.28■□□□□ 0.04
PHGDH-234ENST00000642041 MZT2AQ6P582 158 aa15.28■□□□□ 0.04
PHGDH-234ENST00000642041 MDGA2Q7Z553 956 aa15.28■□□□□ 0.04
PHGDH-234ENST00000642041 GLB1L2Q8IW92 636 aa15.28■□□□□ 0.04
PHGDH-234ENST00000642041 PM20D2Q8IYS1 436 aa15.28■□□□□ 0.04
PHGDH-234ENST00000642041 TMEM99Q8N816 258 aa15.28■□□□□ 0.04
PHGDH-234ENST00000642041 OR2M7Q8NG81 312 aa15.28■□□□□ 0.04
PHGDH-234ENST00000642041 OR10H5Q8NGA6 315 aa15.28■□□□□ 0.04
PHGDH-234ENST00000642041 KCTD12Q96CX2 325 aaKnown RBP15.28■□□□□ 0.04
PHGDH-234ENST00000642041 SLIRPQ9GZT3 109 aaKnown RBP15.28■□□□□ 0.04
PHGDH-234ENST00000642041 NIPAL2Q9H841 368 aa15.28■□□□□ 0.04
PHGDH-234ENST00000642041 GALNT8Q9NY28 637 aa15.28■□□□□ 0.04
PHGDH-234ENST00000642041 KLHL13Q9P2N7 655 aa15.28■□□□□ 0.04
PHGDH-234ENST00000642041 ADAM30Q9UKF2 790 aa15.28■□□□□ 0.04
PHGDH-234ENST00000642041 RCE1Q9Y256 329 aa15.28■□□□□ 0.04
PHGDH-234ENST00000642041 NBEAL1Q6ZS30 2694 aa15.27■□□□□ 0.04
PHGDH-234ENST00000642041 IGLV1-36A0A0B4J1U3 117 aa15.27■□□□□ 0.04
PHGDH-234ENST00000642041 IQCMA0A1B0GVH7 501 aa15.27■□□□□ 0.04
PHGDH-234ENST00000642041 ANKRD61A6NGH8 418 aa15.27■□□□□ 0.04
PHGDH-234ENST00000642041 ZNF879B4DU55 563 aa15.27■□□□□ 0.04
PHGDH-234ENST00000642041 NPIPA2E9PIF3 369 aa15.27■□□□□ 0.04
PHGDH-234ENST00000642041 NPIPA3F8WFD2 350 aa15.27■□□□□ 0.04
PHGDH-234ENST00000642041 GPR171O14626 319 aa15.27■□□□□ 0.04
PHGDH-234ENST00000642041 NEURL1O76050 574 aa15.27■□□□□ 0.04
PHGDH-234ENST00000642041 ADRA2AP08913 450 aa15.27■□□□□ 0.04
PHGDH-234ENST00000642041 MRPL3P09001 348 aaKnown RBP15.27■□□□□ 0.04
PHGDH-234ENST00000642041 MYL9P24844 172 aa15.27■□□□□ 0.04
PHGDH-234ENST00000642041 GDF1P27539 372 aa15.27■□□□□ 0.04
PHGDH-234ENST00000642041 CD40LGP29965 261 aa15.27■□□□□ 0.04
PHGDH-234ENST00000642041 DNASE1L1P49184 302 aa15.27■□□□□ 0.04
PHGDH-234ENST00000642041 CCR9P51686 369 aa15.27■□□□□ 0.04
PHGDH-234ENST00000642041 CARD18P57730 90 aa15.27■□□□□ 0.04
PHGDH-234ENST00000642041 ROM1Q03395 351 aa15.27■□□□□ 0.04
PHGDH-234ENST00000642041 STK11Q15831 433 aa15.27■□□□□ 0.04
PHGDH-234ENST00000642041 PCK2Q16822 640 aa15.27■□□□□ 0.04
PHGDH-234ENST00000642041 FDX2Q6P4F2 183 aa15.27■□□□□ 0.04
PHGDH-234ENST00000642041 ZNF679Q8IYX0 411 aa15.27■□□□□ 0.04
PHGDH-234ENST00000642041 OR6Q1Q8NGQ2 317 aa15.27■□□□□ 0.04
PHGDH-234ENST00000642041 NDNFQ8TB73 568 aa15.27■□□□□ 0.04
PHGDH-234ENST00000642041 RPL3LQ92901 407 aaKnown RBP15.27■□□□□ 0.04
PHGDH-234ENST00000642041 KLHDC3Q9BQ90 382 aa15.27■□□□□ 0.04
PHGDH-234ENST00000642041 CENPOQ9BU64 300 aa15.27■□□□□ 0.04
PHGDH-234ENST00000642041 MRPL13Q9BYD1 178 aaKnown RBP15.27■□□□□ 0.04
PHGDH-234ENST00000642041 COMMD4Q9H0A8 199 aa15.27■□□□□ 0.04
PHGDH-234ENST00000642041 ACKR4Q9NPB9 350 aa15.27■□□□□ 0.04
PHGDH-234ENST00000642041 ANKRD10Q9NXR5 420 aa15.27■□□□□ 0.04
PHGDH-234ENST00000642041 RABL2AQ9UBK7 228 aaPredicted RBP15.27■□□□□ 0.04
PHGDH-234ENST00000642041 RABL2BQ9UNT1 228 aa15.27■□□□□ 0.04
PHGDH-234ENST00000642041 NME2P1O60361 137 aa15.26■□□□□ 0.03
PHGDH-234ENST00000642041 TRAPPC6AO75865 159 aa15.26■□□□□ 0.03
PHGDH-234ENST00000642041 APOL3O95236 402 aa15.26■□□□□ 0.03
PHGDH-234ENST00000642041 RAF1P04049 648 aa15.26■□□□□ 0.03
PHGDH-234ENST00000642041 NME2P22392 152 aa15.26■□□□□ 0.03
PHGDH-234ENST00000642041 NR4A1P22736 598 aa15.26■□□□□ 0.03
PHGDH-234ENST00000642041 PTGS2P35354 604 aa15.26■□□□□ 0.03
PHGDH-234ENST00000642041 CDK5R1Q15078 307 aa15.26■□□□□ 0.03
PHGDH-234ENST00000642041 KCNMB1Q16558 191 aa15.26■□□□□ 0.03
PHGDH-234ENST00000642041 GXYLT1Q4G148 440 aa15.26■□□□□ 0.03
PHGDH-234ENST00000642041 MEIOBQ8N635 442 aa15.26■□□□□ 0.03
PHGDH-234ENST00000642041 FAM83FQ8NEG4 500 aaPredicted RBP15.26■□□□□ 0.03
PHGDH-234ENST00000642041 OR6N2Q8NGY6 317 aa15.26■□□□□ 0.03
PHGDH-234ENST00000642041 SLC25A46Q96AG3 418 aa15.26■□□□□ 0.03
PHGDH-234ENST00000642041 TBX5Q99593 518 aa15.26■□□□□ 0.03
PHGDH-234ENST00000642041 CDADC1Q9BWV3 514 aa15.26■□□□□ 0.03
PHGDH-234ENST00000642041 B3GAT2Q9NPZ5 323 aa15.26■□□□□ 0.03
PHGDH-234ENST00000642041 TRAV1-2A0A0B4J238 106 aa15.25■□□□□ 0.03
PHGDH-234ENST00000642041 TRBV2A0A0J9YWF9 115 aa15.25■□□□□ 0.03
PHGDH-234ENST00000642041 TMEM212A6NML5 194 aa15.25■□□□□ 0.03
PHGDH-234ENST00000642041 ZNF593O00488 134 aaPredicted RBP15.25■□□□□ 0.03
PHGDH-234ENST00000642041 GABRPO00591 440 aa15.25■□□□□ 0.03
PHGDH-234ENST00000642041 PDCD5O14737 125 aa15.25■□□□□ 0.03
PHGDH-234ENST00000642041 SLC19A2O60779 497 aa15.25■□□□□ 0.03
PHGDH-234ENST00000642041 TFP02787 698 aa15.25■□□□□ 0.03
PHGDH-234ENST00000642041 PTBP1P26599 531 aaKnown RBP eCLIP15.25■□□□□ 0.03
PHGDH-234ENST00000642041 LAP3P28838 519 aa15.25■□□□□ 0.03
PHGDH-234ENST00000642041 SFTPDP35247 375 aa15.25■□□□□ 0.03
PHGDH-234ENST00000642041 P2RY4P51582 365 aa15.25■□□□□ 0.03
PHGDH-234ENST00000642041 ZNF133P52736 654 aaPredicted RBP15.25■□□□□ 0.03
PHGDH-234ENST00000642041 BIDP55957 195 aa15.25■□□□□ 0.03
PHGDH-234ENST00000642041 OR12D2P58182 307 aa15.25■□□□□ 0.03
PHGDH-234ENST00000642041 FOXO1Q12778 655 aa15.25■□□□□ 0.03
PHGDH-234ENST00000642041 C3AR1Q16581 482 aa15.25■□□□□ 0.03
PHGDH-234ENST00000642041 ZNF684Q5T5D7 378 aa15.25■□□□□ 0.03
PHGDH-234ENST00000642041 NHLRC1Q6VVB1 395 aa15.25■□□□□ 0.03
PHGDH-234ENST00000642041 ZFP62Q8NB50 900 aaPredicted RBP15.25■□□□□ 0.03
PHGDH-234ENST00000642041 MDS2Q8NDY4 140 aa15.25■□□□□ 0.03
PHGDH-234ENST00000642041 NOXO1Q8NFA2 376 aa15.25■□□□□ 0.03
PHGDH-234ENST00000642041 OR2V1Q8NHB1 315 aa15.25■□□□□ 0.03
PHGDH-234ENST00000642041 NEIL3Q8TAT5 605 aa15.25■□□□□ 0.03
PHGDH-234ENST00000642041 ABHD4Q8TB40 342 aa15.25■□□□□ 0.03
PHGDH-234ENST00000642041 RPS4Y2Q8TD47 263 aa15.25■□□□□ 0.03
PHGDH-234ENST00000642041 PELI1Q96FA3 418 aa15.25■□□□□ 0.03
PHGDH-234ENST00000642041 SCMH1Q96GD3 660 aa15.25■□□□□ 0.03
PHGDH-234ENST00000642041 CEP19Q96LK0 163 aa15.25■□□□□ 0.03
PHGDH-234ENST00000642041 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.25■□□□□ 0.03
PHGDH-234ENST00000642041 SLITRK2Q9H156 845 aa15.25■□□□□ 0.03
PHGDH-234ENST00000642041 RNF122Q9H9V4 155 aa15.25■□□□□ 0.03
PHGDH-234ENST00000642041 PARPBPQ9NWS1 579 aa15.25■□□□□ 0.03
PHGDH-234ENST00000642041 GNG8Q9UK08 70 aa15.25■□□□□ 0.03
PHGDH-234ENST00000642041 ZNF281Q9Y2X9 895 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms