RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 CCDC73Q6ZRK6 1079 aa2.2□□□□□ -2.06
CCDC7-216ENST00000640058 CTAGE6Q86UF2 777 aa2.2□□□□□ -2.06
CCDC7-216ENST00000640058 C15orf56Q8N910 161 aa2.2□□□□□ -2.06
CCDC7-216ENST00000640058 HSD17B11Q8NBQ5 300 aa2.2□□□□□ -2.06
CCDC7-216ENST00000640058 RHEBL1Q8TAI7 183 aa2.2□□□□□ -2.06
CCDC7-216ENST00000640058 LKAAEAR1Q8TD35 194 aa2.2□□□□□ -2.06
CCDC7-216ENST00000640058 ACMSDQ8TDX5 336 aa2.2□□□□□ -2.06
CCDC7-216ENST00000640058 GEMIN6Q8WXD5 167 aaKnown RBP2.2□□□□□ -2.06
CCDC7-216ENST00000640058 ESR2Q92731 530 aa2.2□□□□□ -2.06
CCDC7-216ENST00000640058 PIK3IP1Q96FE7 263 aa2.2□□□□□ -2.06
CCDC7-216ENST00000640058 OR51M1Q9H341 326 aa2.2□□□□□ -2.06
CCDC7-216ENST00000640058 WFDC1Q9HC57 220 aa2.2□□□□□ -2.06
CCDC7-216ENST00000640058 FGF20Q9NP95 211 aaPredicted RBP2.2□□□□□ -2.06
CCDC7-216ENST00000640058 ZNF355PQ9NSJ1 428 aa2.2□□□□□ -2.06
CCDC7-216ENST00000640058 ING4Q9UNL4 249 aa2.2□□□□□ -2.06
CCDC7-216ENST00000640058 RFNGQ9Y644 331 aa2.2□□□□□ -2.06
CCDC7-216ENST00000640058 CNTNAP1P78357 1384 aa2.2□□□□□ -2.06
CCDC7-216ENST00000640058 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.2□□□□□ -2.06
CCDC7-216ENST00000640058 BRWD3Q6RI45 1802 aa2.19□□□□□ -2.06
CCDC7-216ENST00000640058 IGHV3-66A0A0C4DH42 116 aa2.19□□□□□ -2.06
CCDC7-216ENST00000640058 TRBV11-1A0A0K0K1C0 115 aa2.19□□□□□ -2.06
CCDC7-216ENST00000640058 A0A1B0GVX0 72 aa2.19□□□□□ -2.06
CCDC7-216ENST00000640058 CDC7O00311 574 aa2.19□□□□□ -2.06
CCDC7-216ENST00000640058 RAB29O14966 203 aa2.19□□□□□ -2.06
CCDC7-216ENST00000640058 WBP4O75554 376 aaKnown RBP2.19□□□□□ -2.06
CCDC7-216ENST00000640058 AGTP01019 485 aa2.19□□□□□ -2.06
CCDC7-216ENST00000640058 FOXN2P32314 431 aa2.19□□□□□ -2.06
CCDC7-216ENST00000640058 YWHAGP61981 247 aaKnown RBP eCLIP2.19□□□□□ -2.06
CCDC7-216ENST00000640058 SLC7A9P82251 487 aa2.19□□□□□ -2.06
CCDC7-216ENST00000640058 CUL2Q13617 745 aa2.19□□□□□ -2.06
CCDC7-216ENST00000640058 PON3Q15166 354 aa2.19□□□□□ -2.06
CCDC7-216ENST00000640058 CHRNA6Q15825 494 aa2.19□□□□□ -2.06
CCDC7-216ENST00000640058 HSP90AB3PQ58FF7 597 aa2.19□□□□□ -2.06
CCDC7-216ENST00000640058 CARD17Q5XLA6 110 aa2.19□□□□□ -2.06
CCDC7-216ENST00000640058 TMEM179Q6ZVK1 233 aa2.19□□□□□ -2.06
CCDC7-216ENST00000640058 RIMKLAQ8IXN7 391 aa2.19□□□□□ -2.06
CCDC7-216ENST00000640058 IQCKQ8N0W5 287 aa2.19□□□□□ -2.06
CCDC7-216ENST00000640058 EID2Q8N6I1 236 aa2.19□□□□□ -2.06
CCDC7-216ENST00000640058 KIFAP3Q92845 792 aa2.19□□□□□ -2.06
CCDC7-216ENST00000640058 SLC38A4Q969I6 547 aa2.19□□□□□ -2.06
CCDC7-216ENST00000640058 P2RX4Q99571 388 aa2.19□□□□□ -2.06
CCDC7-216ENST00000640058 ATP5SQ99766 215 aa2.19□□□□□ -2.06
CCDC7-216ENST00000640058 CENPKQ9BS16 269 aa2.19□□□□□ -2.06
CCDC7-216ENST00000640058 RPF2Q9H7B2 306 aaKnown RBP2.19□□□□□ -2.06
CCDC7-216ENST00000640058 ANKRA2Q9H9E1 313 aa2.19□□□□□ -2.06
CCDC7-216ENST00000640058 GPATCH2LQ9NWQ4 482 aa2.19□□□□□ -2.06
CCDC7-216ENST00000640058 DENND4AQ7Z401 1863 aa2.19□□□□□ -2.06
CCDC7-216ENST00000640058 USP47Q96K76 1375 aa2.19□□□□□ -2.06
CCDC7-216ENST00000640058 CENPJQ9HC77 1338 aaPredicted RBP2.18□□□□□ -2.06
CCDC7-216ENST00000640058 YEATS2Q9ULM3 1422 aa2.18□□□□□ -2.06
CCDC7-216ENST00000640058 DOCK8Q8NF50 2099 aa2.18□□□□□ -2.06
CCDC7-216ENST00000640058 IGKV3D-11A0A0A0MRZ8 115 aa2.18□□□□□ -2.06
CCDC7-216ENST00000640058 TRBV9A0A0B4J1U6 114 aa2.18□□□□□ -2.06
CCDC7-216ENST00000640058 CIB4A0PJX0 185 aa2.18□□□□□ -2.06
CCDC7-216ENST00000640058 HIDE1A8MVS5 230 aa2.18□□□□□ -2.06
CCDC7-216ENST00000640058 H0YHG0 523 aa2.18□□□□□ -2.06
CCDC7-216ENST00000640058 DNALI1O14645 258 aaPredicted RBP2.18□□□□□ -2.06
CCDC7-216ENST00000640058 CLOCKO15516 846 aa2.18□□□□□ -2.06
CCDC7-216ENST00000640058 RRP8O43159 456 aaKnown RBP2.18□□□□□ -2.06
CCDC7-216ENST00000640058 RBFOX2O43251 390 aaKnown RBP eCLIP2.18□□□□□ -2.06
CCDC7-216ENST00000640058 OR2F2O95006 317 aa2.18□□□□□ -2.06
CCDC7-216ENST00000640058 AIFM1O95831 613 aa2.18□□□□□ -2.06
CCDC7-216ENST00000640058 PRPS2P11908 318 aa2.18□□□□□ -2.06
CCDC7-216ENST00000640058 NAA10P41227 235 aaPredicted RBP2.18□□□□□ -2.06
CCDC7-216ENST00000640058 CDKN1BP46527 198 aa2.18□□□□□ -2.06
CCDC7-216ENST00000640058 TMED10P49755 219 aaKnown RBP2.18□□□□□ -2.06
CCDC7-216ENST00000640058 RAB10P61026 200 aa2.18□□□□□ -2.06
CCDC7-216ENST00000640058 RAP1AP62834 184 aa2.18□□□□□ -2.06
CCDC7-216ENST00000640058 CCNA1P78396 465 aa2.18□□□□□ -2.06
CCDC7-216ENST00000640058 MEF2BQ02080 365 aaPredicted RBP2.18□□□□□ -2.06
CCDC7-216ENST00000640058 TGM3Q08188 693 aa2.18□□□□□ -2.06
CCDC7-216ENST00000640058 ZNF684Q5T5D7 378 aa2.18□□□□□ -2.06
CCDC7-216ENST00000640058 ANKRD26P1Q6NSI1 321 aa2.18□□□□□ -2.06
CCDC7-216ENST00000640058 ZNF493Q6ZR52 646 aa2.18□□□□□ -2.06
CCDC7-216ENST00000640058 NCCRP1Q6ZVX7 275 aaPredicted RBP2.18□□□□□ -2.06
CCDC7-216ENST00000640058 STRADAQ7RTN6 431 aa2.18□□□□□ -2.06
CCDC7-216ENST00000640058 SCD5Q86SK9 330 aa2.18□□□□□ -2.06
CCDC7-216ENST00000640058 BBS5Q8N3I7 341 aa2.18□□□□□ -2.06
CCDC7-216ENST00000640058 MREGQ8N565 214 aa2.18□□□□□ -2.06
CCDC7-216ENST00000640058 OR10G4Q8NGN3 311 aa2.18□□□□□ -2.06
CCDC7-216ENST00000640058 OR4S2Q8NH73 311 aa2.18□□□□□ -2.06
CCDC7-216ENST00000640058 CXorf40AQ8TE69 158 aa2.18□□□□□ -2.06
CCDC7-216ENST00000640058 PKNOX2Q96KN3 472 aa2.18□□□□□ -2.06
CCDC7-216ENST00000640058 CHAC1Q9BUX1 264 aa2.18□□□□□ -2.06
CCDC7-216ENST00000640058 RPP21Q9H633 154 aaKnown RBP2.18□□□□□ -2.06
CCDC7-216ENST00000640058 NEK6Q9HC98 313 aa2.18□□□□□ -2.06
CCDC7-216ENST00000640058 CD84Q9UIB8 345 aa2.18□□□□□ -2.06
CCDC7-216ENST00000640058 COL27A1Q8IZC6 1860 aaPredicted RBP2.18□□□□□ -2.06
CCDC7-216ENST00000640058 GLYATL1P3A0A0U1RQE8 302 aa2.17□□□□□ -2.06
CCDC7-216ENST00000640058 K7EM74 188 aa2.17□□□□□ -2.06
CCDC7-216ENST00000640058 HMMRO75330 724 aa2.17□□□□□ -2.06
CCDC7-216ENST00000640058 OR2J3O76001 311 aa2.17□□□□□ -2.06
CCDC7-216ENST00000640058 LINC00869P0C866 280 aa2.17□□□□□ -2.06
CCDC7-216ENST00000640058 ACTG2P63267 376 aa2.17□□□□□ -2.06
CCDC7-216ENST00000640058 ADARB1P78563 741 aaKnown RBP2.17□□□□□ -2.06
CCDC7-216ENST00000640058 SLC25A11Q02978 314 aaKnown RBP2.17□□□□□ -2.06
CCDC7-216ENST00000640058 SYCNQ0VAF6 134 aa2.17□□□□□ -2.06
CCDC7-216ENST00000640058 CLINT1Q14677 625 aa2.17□□□□□ -2.06
CCDC7-216ENST00000640058 C9orf135Q5VTT2 229 aa2.17□□□□□ -2.06
CCDC7-216ENST00000640058 TEX43Q6ZNM6 134 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms