RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 ST6GALNAC5Q9BVH7 336 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 EGLN1Q9GZT9 426 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 RERGLQ9H628 205 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 TUBA4BQ9H853 241 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 ST3GAL6Q9Y274 331 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 MAP1LC3B2A6NCE7 125 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 LRP3O75074 770 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 ZNF205O95201 554 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 FGF19O95750 216 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 BCHEP06276 602 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 CNR2P34972 360 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 HNRNPA3P51991 378 aaKnown RBP3.93□□□□□ -1.78
SCN3A-209ENST00000639244 POLR2HP52434 150 aaKnown RBP3.93□□□□□ -1.78
SCN3A-209ENST00000639244 GAGE5Q13069 117 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 GAGE6Q13070 117 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 IRF2BP2Q7Z5L9 587 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 H1FOOQ8IZA3 346 aaPredicted RBP3.93□□□□□ -1.78
SCN3A-209ENST00000639244 TMEM123Q8N131 208 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 MS4A8Q9BY19 250 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 MAP1LC3BQ9GZQ8 125 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 SEMA4BQ9NPR2 832 aaPredicted RBP3.93□□□□□ -1.78
SCN3A-209ENST00000639244 CRIM1Q9NZV1 1036 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 EMCNQ9ULC0 261 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 OAZ3Q9UMX2 235 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 EDC4Q6P2E9 1401 aaKnown RBP3.93□□□□□ -1.78
SCN3A-209ENST00000639244 RS1O15537 224 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 OR12D1P0DN82 309 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 FSHRP23945 695 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 PSMA1P25786 263 aaKnown RBP3.92□□□□□ -1.78
SCN3A-209ENST00000639244 ADORA2AP29274 412 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 ZSWIM7Q19AV6 140 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 OR2T2Q6IF00 324 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 RNF111Q6ZNA4 994 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 C15orf39Q6ZRI6 1047 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 DND1Q8IYX4 353 aaKnown RBP3.92□□□□□ -1.78
SCN3A-209ENST00000639244 TMEM116Q8NCL8 245 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 OR1S1Q8NH92 325 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 S1PR5Q9H228 398 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 OR52D1Q9H346 318 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 MFSD1Q9H3U5 465 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 OR1A1Q9P1Q5 309 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 SS18L2Q9UHA2 77 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 ZNF346Q9UL40 294 aaKnown RBP3.92□□□□□ -1.78
SCN3A-209ENST00000639244 LOC105369274A0A096LPK9 316 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 LOC102723532A0A0G2JNH3 316 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 IGSF23A1L1A6 192 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 IGLON5A6NGN9 336 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 GGT3PA6NGU5 568 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 ALOX12BO75342 701 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 MMP11P24347 488 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 CRISP1P54107 249 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 CD300LDQ6UXZ3 194 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 OR4N4Q8N0Y3 316 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 TCEANCQ8N8B7 351 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 CPB2Q96IY4 423 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 DPH2Q9BQC3 489 aaPredicted RBP3.92□□□□□ -1.78
SCN3A-209ENST00000639244 CHST7Q9NS84 486 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 DKK4Q9UBT3 224 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 A0A087WUJ7 227 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.92□□□□□ -1.78
SCN3A-209ENST00000639244 P2RY10O00398 339 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 UPK3AO75631 287 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 SFTPBP07988 381 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 FCGR2AP12318 317 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 ELNP15502 786 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 TPSB2P20231 275 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 KLRK1P26718 216 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 ITPKBP27987 946 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 ST3GAL3Q11203 375 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 TPSAB1Q15661 275 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 CPSF6Q16630 551 aaKnown RBP eCLIP3.92□□□□□ -1.78
SCN3A-209ENST00000639244 TTLL9Q3SXZ7 439 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 OR2A2Q6IF42 318 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 TMEM182Q6ZP80 229 aaPredicted RBP3.92□□□□□ -1.78
SCN3A-209ENST00000639244 KCNMB4Q86W47 210 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 OR10AD1Q8NGE0 317 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 OR52E4Q8NGH9 312 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 LHX4Q969G2 390 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 QTRT1Q9BXR0 403 aaKnown RBP3.92□□□□□ -1.78
SCN3A-209ENST00000639244 GLIS2Q9BZE0 524 aaPredicted RBP3.92□□□□□ -1.78
SCN3A-209ENST00000639244 SLC2A4RGQ9NR83 387 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 V9GYY9 64 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 MROH2AA6NES4 1674 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 TBC1D3IA0A087WXS9 549 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 FAM166BA8MTA8 275 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 E7EQ34 232 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 K7EPK0 472 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 RGS11O94810 467 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 PGCP20142 388 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 AZU1P20160 251 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 RPL10P27635 214 aaKnown RBP3.92□□□□□ -1.78
SCN3A-209ENST00000639244 SEC61A1P61619 476 aaKnown RBP3.92□□□□□ -1.78
SCN3A-209ENST00000639244 GUCA2AQ02747 115 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 GNMTQ14749 295 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 LGALSLQ3ZCW2 172 aaPredicted RBP3.92□□□□□ -1.78
SCN3A-209ENST00000639244 TOMM20LQ6UXN7 152 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 ESPNLQ6ZVH7 1005 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 ZNF440Q8IYI8 595 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 FAM71E2Q8N5Q1 922 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 DCBLD1Q8N8Z6 715 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms