RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 ZNF239Q16600 458 aaKnown RBP16.91■□□□□ 0.3
SCARB2-213ENST00000638680 ZNF768Q9H5H4 540 aaKnown RBP16.91■□□□□ 0.3
SCARB2-213ENST00000638680 MBNL1Q9NR56 388 aaKnown RBP16.91■□□□□ 0.3
SCARB2-213ENST00000638680 AK3Q9UIJ7 227 aa16.91■□□□□ 0.3
SCARB2-213ENST00000638680 FXYD1O00168 92 aa16.91■□□□□ 0.3
SCARB2-213ENST00000638680 AANATQ16613 207 aa16.91■□□□□ 0.3
SCARB2-213ENST00000638680 CTF1Q16619 201 aa16.91■□□□□ 0.3
SCARB2-213ENST00000638680 PRSS36Q5K4E3 855 aa16.91■□□□□ 0.3
SCARB2-213ENST00000638680 GJC3Q8NFK1 279 aa16.91■□□□□ 0.3
SCARB2-213ENST00000638680 KIRREL1Q96J84 757 aa16.91■□□□□ 0.3
SCARB2-213ENST00000638680 GAREM1Q9H706 876 aa16.91■□□□□ 0.3
SCARB2-213ENST00000638680 PDFQ9HBH1 243 aa16.91■□□□□ 0.3
SCARB2-213ENST00000638680 APOA2P02652 100 aa16.91■□□□□ 0.3
SCARB2-213ENST00000638680 POU3F3P20264 500 aaPredicted RBP16.91■□□□□ 0.3
SCARB2-213ENST00000638680 LIPHQ8WWY8 451 aa16.91■□□□□ 0.3
SCARB2-213ENST00000638680 MRPL22Q9NWU5 206 aaKnown RBP16.91■□□□□ 0.3
SCARB2-213ENST00000638680 LHX6Q9UPM6 363 aa16.91■□□□□ 0.3
SCARB2-213ENST00000638680 ST8SIA3O43173 380 aa16.91■□□□□ 0.3
SCARB2-213ENST00000638680 CD63P08962 238 aa16.91■□□□□ 0.3
SCARB2-213ENST00000638680 PTAFRP25105 342 aa16.91■□□□□ 0.3
SCARB2-213ENST00000638680 NKX2-1P43699 371 aaPredicted RBP16.91■□□□□ 0.3
SCARB2-213ENST00000638680 GZMKP49863 264 aa16.91■□□□□ 0.3
SCARB2-213ENST00000638680 TCTN3Q6NUS6 607 aa16.91■□□□□ 0.3
SCARB2-213ENST00000638680 TMEM81Q6P7N7 255 aa16.91■□□□□ 0.3
SCARB2-213ENST00000638680 VHLLQ6RSH7 139 aa16.91■□□□□ 0.3
SCARB2-213ENST00000638680 ZNF813Q6ZN06 617 aa16.91■□□□□ 0.3
SCARB2-213ENST00000638680 DOK3Q7L591 496 aa16.91■□□□□ 0.3
SCARB2-213ENST00000638680 OR5M1Q8NGP8 315 aa16.91■□□□□ 0.3
SCARB2-213ENST00000638680 OR51E1Q8TCB6 317 aa16.91■□□□□ 0.3
SCARB2-213ENST00000638680 PISDQ9UG56 409 aa16.91■□□□□ 0.3
SCARB2-213ENST00000638680 PADI1Q9ULC6 663 aa16.91■□□□□ 0.3
SCARB2-213ENST00000638680 MN1Q10571 1320 aaPredicted RBP16.9■□□□□ 0.3
SCARB2-213ENST00000638680 A0A1B0GTL3 188 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 EIF1BO60739 113 aaKnown RBP16.9■□□□□ 0.3
SCARB2-213ENST00000638680 PRTGQ2VWP7 1150 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 FAM26DQ5JW98 314 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 AFMIDQ63HM1 303 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 GRAMD2AQ8IUY3 354 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 UCN3Q969E3 161 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 ZNF2Q9BSG1 426 aaPredicted RBP16.9■□□□□ 0.3
SCARB2-213ENST00000638680 DAPP1Q9UN19 280 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 RAB27BO00194 218 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 GRINAQ7Z429 371 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 PIGQQ9BRB3 760 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 GPR173Q9NS66 373 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 HAGHQ16775 308 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 MANEAQ5SRI9 462 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 OR51A2Q8NGJ7 313 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 A0A1B0GUH1 482 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 ARRDC5A6NEK1 342 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 ZNF814B7Z6K7 855 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 M0R082 166 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 DIO1P49895 249 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 GCNT2Q8N0V5 402 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 SEMA6DQ8NFY4 1073 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 MED18Q9BUE0 208 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 EMC6Q9BV81 110 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 THAP10Q9P2Z0 257 aaPredicted RBP16.9■□□□□ 0.3
SCARB2-213ENST00000638680 IFITM5A6NNB3 132 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 ENSAO43768 121 aaKnown RBP16.9■□□□□ 0.3
SCARB2-213ENST00000638680 JTBO76095 146 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 ABLIM3O94929 683 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 OR8U8P0C7N1 319 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 PSMB6P28072 239 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 SDHAP31040 664 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 RPL34P49207 117 aaKnown RBP16.9■□□□□ 0.3
SCARB2-213ENST00000638680 DUSP8Q13202 625 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 TMEM71Q6P5X7 295 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 SEMA4CQ9C0C4 833 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 CDCP1Q9H5V8 836 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 ZNF346Q9UL40 294 aaKnown RBP16.9■□□□□ 0.3
SCARB2-213ENST00000638680 PCDHB10Q9UN67 800 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 NUMBLQ9Y6R0 609 aa16.9■□□□□ 0.3
SCARB2-213ENST00000638680 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.89■□□□□ 0.29
SCARB2-213ENST00000638680 SELENBP1Q13228 472 aa16.89■□□□□ 0.29
SCARB2-213ENST00000638680 Q6ZRG5 221 aa16.89■□□□□ 0.29
SCARB2-213ENST00000638680 CSF3RQ99062 836 aa16.89■□□□□ 0.29
SCARB2-213ENST00000638680 H7C1Q1 480 aa16.89■□□□□ 0.29
SCARB2-213ENST00000638680 FCMRO60667 390 aa16.89■□□□□ 0.29
SCARB2-213ENST00000638680 OR4E1P0C645 316 aa16.89■□□□□ 0.29
SCARB2-213ENST00000638680 EIF1P41567 113 aaKnown RBP16.89■□□□□ 0.29
SCARB2-213ENST00000638680 KIR2DL3P43628 341 aa16.89■□□□□ 0.29
SCARB2-213ENST00000638680 BCORP1Q8N888 145 aa16.89■□□□□ 0.29
SCARB2-213ENST00000638680 OR51H1Q8NH63 302 aa16.89■□□□□ 0.29
SCARB2-213ENST00000638680 SMIM19Q96E16 107 aa16.89■□□□□ 0.29
SCARB2-213ENST00000638680 CD3DP04234 171 aa16.89■□□□□ 0.29
SCARB2-213ENST00000638680 FCGR2CP31995 323 aa16.89■□□□□ 0.29
SCARB2-213ENST00000638680 TAF9Q16594 264 aa16.89■□□□□ 0.29
SCARB2-213ENST00000638680 SYT13Q7L8C5 426 aa16.89■□□□□ 0.29
SCARB2-213ENST00000638680 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.89■□□□□ 0.29
SCARB2-213ENST00000638680 SEH1LQ96EE3 360 aa16.89■□□□□ 0.29
SCARB2-213ENST00000638680 FN3KRPQ9HA64 309 aa16.89■□□□□ 0.29
SCARB2-213ENST00000638680 FAM74A1Q5RGS3 127 aa16.89■□□□□ 0.29
SCARB2-213ENST00000638680 HEYLQ9NQ87 328 aaPredicted RBP16.89■□□□□ 0.29
SCARB2-213ENST00000638680 CYB5BO43169 146 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 EIF4E2O60573 245 aaKnown RBP16.88■□□□□ 0.29
SCARB2-213ENST00000638680 GLI4P10075 376 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 IGFBP6P24592 240 aaPredicted RBP16.88■□□□□ 0.29
SCARB2-213ENST00000638680 APH1BQ8WW43 257 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 ZNF816-ZNF321PA0A0X1KG74 233 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms