RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 ISYNA1Q9NPH2 558 aa11.07□□□□□ -0.64
CTSD-208ENST00000636843 NPAP1Q9NZP6 1156 aa11.07□□□□□ -0.64
CTSD-208ENST00000636843 H2AFY2Q9P0M6 372 aaPredicted RBP11.07□□□□□ -0.64
CTSD-208ENST00000636843 RPS6KB2Q9UBS0 482 aa11.07□□□□□ -0.64
CTSD-208ENST00000636843 GDF2Q9UK05 429 aaPredicted RBP11.07□□□□□ -0.64
CTSD-208ENST00000636843 BAIAP2Q9UQB8 552 aa11.07□□□□□ -0.64
CTSD-208ENST00000636843 B3GALT5Q9Y2C3 310 aa11.07□□□□□ -0.64
CTSD-208ENST00000636843 SPIN1Q9Y657 262 aaPredicted RBP11.07□□□□□ -0.64
CTSD-208ENST00000636843 A3GALT2U3KPV4 340 aa11.07□□□□□ -0.64
CTSD-208ENST00000636843 TMEM129A0AVI4 362 aa11.06□□□□□ -0.64
CTSD-208ENST00000636843 HTR3EA5X5Y0 456 aa11.06□□□□□ -0.64
CTSD-208ENST00000636843 CLDN25C9JDP6 229 aa11.06□□□□□ -0.64
CTSD-208ENST00000636843 MAKP20794 623 aa11.06□□□□□ -0.64
CTSD-208ENST00000636843 PTAFRP25105 342 aa11.06□□□□□ -0.64
CTSD-208ENST00000636843 FKBP2P26885 142 aaKnown RBP11.06□□□□□ -0.64
CTSD-208ENST00000636843 APOBEC1P41238 236 aaKnown RBP11.06□□□□□ -0.64
CTSD-208ENST00000636843 DSCR9P59020 149 aa11.06□□□□□ -0.64
CTSD-208ENST00000636843 AADACL4Q5VUY2 407 aa11.06□□□□□ -0.64
CTSD-208ENST00000636843 FBXW9Q5XUX1 488 aa11.06□□□□□ -0.64
CTSD-208ENST00000636843 TMEM108Q6UXF1 575 aa11.06□□□□□ -0.64
CTSD-208ENST00000636843 GID4Q8IVV7 300 aa11.06□□□□□ -0.64
CTSD-208ENST00000636843 PFN4Q8NHR9 129 aa11.06□□□□□ -0.64
CTSD-208ENST00000636843 RNFT2Q96EX2 444 aa11.06□□□□□ -0.64
CTSD-208ENST00000636843 CCDC59Q9P031 241 aaKnown RBP11.06□□□□□ -0.64
CTSD-208ENST00000636843 NOSIPQ9Y314 301 aaKnown RBP11.06□□□□□ -0.64
CTSD-208ENST00000636843 ALPK2Q86TB3 2170 aa11.06□□□□□ -0.64
CTSD-208ENST00000636843 CIB4A0PJX0 185 aa11.05□□□□□ -0.64
CTSD-208ENST00000636843 A8MV72 311 aaPredicted RBP11.05□□□□□ -0.64
CTSD-208ENST00000636843 GPR171O14626 319 aa11.05□□□□□ -0.64
CTSD-208ENST00000636843 DNPH1O43598 174 aa11.05□□□□□ -0.64
CTSD-208ENST00000636843 SSX4O60224 188 aa11.05□□□□□ -0.64
CTSD-208ENST00000636843 PMS2P2O95744 297 aa11.05□□□□□ -0.64
CTSD-208ENST00000636843 TFPIP10646 304 aa11.05□□□□□ -0.64
CTSD-208ENST00000636843 HTR1FP30939 366 aa11.05□□□□□ -0.64
CTSD-208ENST00000636843 ALG10BQ5I7T1 473 aa11.05□□□□□ -0.64
CTSD-208ENST00000636843 ARMC4Q5T2S8 1044 aa11.05□□□□□ -0.64
CTSD-208ENST00000636843 SMARCD3Q6STE5 483 aa11.05□□□□□ -0.64
CTSD-208ENST00000636843 LINC00114Q6XXX2 140 aa11.05□□□□□ -0.64
CTSD-208ENST00000636843 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.05□□□□□ -0.64
CTSD-208ENST00000636843 UBE2J2Q8N2K1 259 aa11.05□□□□□ -0.64
CTSD-208ENST00000636843 LNX2Q8N448 690 aa11.05□□□□□ -0.64
CTSD-208ENST00000636843 OR10H5Q8NGA6 315 aa11.05□□□□□ -0.64
CTSD-208ENST00000636843 OR6Q1Q8NGQ2 317 aa11.05□□□□□ -0.64
CTSD-208ENST00000636843 DNAJA4Q8WW22 397 aaPredicted RBP11.05□□□□□ -0.64
CTSD-208ENST00000636843 APH1AQ96BI3 265 aa11.05□□□□□ -0.64
CTSD-208ENST00000636843 DHRS9Q9BPW9 319 aa11.05□□□□□ -0.64
CTSD-208ENST00000636843 SLIRPQ9GZT3 109 aaKnown RBP11.05□□□□□ -0.64
CTSD-208ENST00000636843 OR51E2Q9H255 320 aa11.05□□□□□ -0.64
CTSD-208ENST00000636843 MMP27Q9H306 513 aa11.05□□□□□ -0.64
CTSD-208ENST00000636843 CBLN4Q9NTU7 201 aa11.05□□□□□ -0.64
CTSD-208ENST00000636843 C20orf141Q9NUB4 165 aa11.05□□□□□ -0.64
CTSD-208ENST00000636843 SEC14L4Q9UDX3 406 aa11.05□□□□□ -0.64
CTSD-208ENST00000636843 CHRNA9Q9UGM1 479 aa11.05□□□□□ -0.64
CTSD-208ENST00000636843 CLEC2DQ9UHP7 191 aa11.05□□□□□ -0.64
CTSD-208ENST00000636843 SIGLEC7Q9Y286 467 aa11.05□□□□□ -0.64
CTSD-208ENST00000636843 EXOGQ9Y2C4 368 aaKnown RBP11.05□□□□□ -0.64
CTSD-208ENST00000636843 HDGFL3Q9Y3E1 203 aa11.05□□□□□ -0.64
CTSD-208ENST00000636843 LOC100506127A0A0U1RQW1 187 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 RNF212BA8MTL3 300 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 BHLHE40O14503 412 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 CH25HO95992 272 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 SAGP10523 405 aaPredicted RBP11.04□□□□□ -0.64
CTSD-208ENST00000636843 PSMA1P25786 263 aaKnown RBP11.04□□□□□ -0.64
CTSD-208ENST00000636843 OPRL1P41146 370 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 WNT4P56705 351 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 COPZ1P61923 177 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 TMED1Q13445 227 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 SSX1Q16384 188 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 CHRFAM7AQ494W8 412 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 ZNF404Q494X3 552 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 OR7E24Q6IFN5 339 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 C11orf71Q6IPW1 123 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 C16orf87Q6PH81 154 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 SLC22A25Q6T423 547 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 FBXL14Q8N1E6 418 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 PIAS4Q8N2W9 510 aaPredicted RBP11.04□□□□□ -0.64
CTSD-208ENST00000636843 FAM71CQ8NEG0 241 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 OR52N5Q8NH56 324 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 MCFD2Q8NI22 146 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 CHCHD6Q9BRQ6 235 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 JAM3Q9BX67 310 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 CACNG6Q9BXT2 260 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 SIAEQ9HAT2 523 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 AKIP1Q9NQ31 210 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 MEPEQ9NQ76 525 aaPredicted RBP11.04□□□□□ -0.64
CTSD-208ENST00000636843 EXOSC3Q9NQT5 275 aaKnown RBP11.04□□□□□ -0.64
CTSD-208ENST00000636843 ASB6Q9NWX5 421 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 NDUFB11Q9NX14 153 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 SLC25A15Q9Y619 301 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 PMF1-BGLAPU3KQ54 211 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 CR1P17927 2039 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 PLCE1Q9P212 2302 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 IGHV4-30-2A0A087WSY4 118 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 A0A1B0GVG6 124 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 METTL15A6NJ78 407 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 ZNF716A6NP11 495 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 E7EQL1 145 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 KPNA4O00629 521 aaPredicted RBP11.04□□□□□ -0.64
CTSD-208ENST00000636843 PTP4A3O75365 173 aa11.04□□□□□ -0.64
CTSD-208ENST00000636843 RAD51DO75771 328 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms