RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-222	ENST00000636022	CD47	Q08722	323 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	TOP3A	Q13472	1001 aa	Predicted RBP	6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	ENDOG	Q14249	297 aa	Known RBP	6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	MOG	Q16653	247 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	ZNF718	Q3SXZ3	478 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	ANKDD1A	Q495B1	522 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	SPATA46	Q5T0L3	261 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	MBNL2	Q5VZF2	373 aa	Known RBP	6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	FAM205BP	Q63HN1	556 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	ZNF774	Q6NX45	483 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	TBPL2	Q6SJ96	375 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	C1orf229	Q6ZS94	237 aa	Predicted RBP	6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	RFPL4B	Q6ZWI9	263 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	TMPRSS11F	Q6ZWK6	438 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	CBLL1	Q75N03	491 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	ARPIN	Q7Z6K5	226 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	SYT9	Q86SS6	491 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	OAF	Q86UD1	273 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	RNF113B	Q8IZP6	322 aa	Known RBP	6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	OR13C2	Q8NGS9	318 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	OR51F2	Q8NH61	342 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	FNDC8	Q8TC99	324 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	KLF14	Q8TD94	323 aa	Predicted RBP	6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	SNX33	Q8WV41	574 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	IPCEF1	Q8WWN9	437 aa	Predicted RBP	6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	GEMIN6	Q8WXD5	167 aa	Known RBP	6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	ACOT11	Q8WXI4	607 aa	Predicted RBP	6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	LZIC	Q8WZA0	190 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	ARPC5L	Q9BPX5	153 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	FNDC11	Q9BVV2	318 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	OR2J1	Q9GZK6	312 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	KCNN2	Q9H2S1	579 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	ZNF665	Q9H7R5	613 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	LPAR2	Q9HBW0	351 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	CCNB1IP1	Q9NPC3	277 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	G6PC2	Q9NQR9	355 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	KLHL21	Q9UJP4	597 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	AP3M1	Q9Y2T2	418 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	TIMM10B	Q9Y5J6	103 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	CACNG2	Q9Y698	323 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	VWF	P04275	2813 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	DYSF	O75923	2080 aa		6.22	□□□□□ -1.41
CACNA1A-222	ENST00000636022	TRAV20	A0A0B4J274	112 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022		A6NIZ1	184 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	ZSCAN5B	A6NJL1	495 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	EFCAB9	A8MZ26	197 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022		H7C1C5	153 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	AHCYL1	O43865	530 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	PTP4A3	O75365	173 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	UBOX5	O94941	541 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	VENTX	O95231	258 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	ZNF682	O95780	498 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	AVP	P01185	164 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	MT-ND5	P03915	603 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	COX4I1	P13073	169 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	ITGA2	P17301	1181 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	MSR1	P21757	451 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	DRD4	P21917	467 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	IFNA8	P32881	189 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	GSK3B	P49841	420 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	GDI2	P50395	445 aa	Known RBP	6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	ZNF81	P51508	661 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	RAP1B	P61224	184 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	PCBD1	P61457	104 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	LCN6	P62502	163 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	RAP1A	P62834	184 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	TEK	Q02763	1124 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	MVK	Q03426	396 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	TST	Q16762	297 aa	Known RBP	6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	IFI44L	Q53G44	452 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	HSP90B2P	Q58FF3	399 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	FAM209A	Q5JX71	171 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	AVPI1	Q5T686	147 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	LIPN	Q5VXI9	398 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	HACD2	Q6Y1H2	254 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	MBOAT2	Q6ZWT7	520 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	USP51	Q70EK9	711 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	FAM122B	Q7Z309	247 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	TREML1	Q86YW5	311 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	C1orf174	Q8IYL3	243 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	ALDH16A1	Q8IZ83	802 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	ICA1L	Q8NDH6	482 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	SEMA6D	Q8NFY4	1073 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	SLC25A40	Q8TBP6	338 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	SLC7A13	Q8TCU3	470 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	HSH2D	Q96JZ2	352 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	C4orf45	Q96LM5	186 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	LRRC37B	Q96QE4	947 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	HOPX	Q9BPY8	73 aa	Predicted RBP	6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	ANKRD19P	Q9H560	264 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	METTL17	Q9H7H0	456 aa	Predicted RBP	6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	SAP30L	Q9HAJ7	183 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	NMNAT1	Q9HAN9	279 aa	Predicted RBP	6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	POLE4	Q9NR33	117 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	DECR2	Q9NUI1	292 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	EIF3K	Q9UBQ5	218 aa	Known RBP	6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	ADAM18	Q9Y3Q7	739 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	GRIP1	Q9Y3R0	1128 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	WIPI2	Q9Y4P8	454 aa		6.21	□□□□□ -1.42
CACNA1A-222	ENST00000636022	DOCK11	Q5JSL3	2073 aa		6.21	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms