RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 OR4K17Q8NGC6 315 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 OR14C36Q8NHC7 312 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 SPACA7Q96KW9 195 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 CFHR5Q9BXR6 569 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 PRMT8Q9NR22 394 aaPredicted RBP13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 WBP1LQ9NX94 342 aa13.36□□□□□ -0.27
CACNA1A-220ENST00000635988 FAM25EA8MYX2 175 aa13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 H7C1C5 153 aa13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 HOXC4P09017 264 aaPredicted RBP13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 PSMB6P28072 239 aa13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 ARRB1P49407 418 aaPredicted RBP13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 GPR85P60893 370 aa13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 LCN6P62502 163 aa13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 AIMP2Q13155 320 aaKnown RBP13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 PPP1R1AQ13522 171 aa13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 KLHL26Q53HC5 615 aa13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 ZNF776Q68DI1 518 aaPredicted RBP13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 SLC18B1Q6NT16 456 aa13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 UNQ6126/PRO20091Q6UXV3 157 aa13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 PAQR8Q8TEZ7 354 aa13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 ASB12Q8WXK4 309 aa13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 SYT4Q9H2B2 425 aa13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 KCNG2Q9UJ96 466 aa13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 SCN2AQ99250 2005 aa13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 C2orf74A8MZ97 194 aa13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 LDLRAD4O15165 306 aa13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 PLRG1O43660 514 aaKnown RBP13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 ACTL6AO96019 429 aa13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 CT45A8P0DMV1 189 aa13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 CT45A9P0DMV2 189 aa13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 IGFBP3P17936 291 aaPredicted RBP13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 AKR1C2P52895 323 aa13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 SKP1P63208 163 aa13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 ROM1Q03395 351 aa13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 AKR1C1Q04828 323 aa13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 SERTAD2Q14140 314 aa13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 CT45A2Q5DJT8 189 aa13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 NKAPLQ5M9Q1 402 aa13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 KCTD18Q6PI47 426 aaPredicted RBP13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 ASB5Q8WWX0 329 aa13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 ASB16Q96NS5 453 aa13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 AMELYQ99218 206 aa13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 CREBZFQ9NS37 354 aa13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 KLK13Q9UKR3 277 aa13.35□□□□□ -0.27
CACNA1A-220ENST00000635988 EML5Q05BV3 1969 aa13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 DOCK9Q9BZ29 2069 aa13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 TRBV23OR9-2A0A075B6M9 112 aa13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 TRBV6-7A0A0A0MS04 114 aa13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 METTL21EPA6NDL7 271 aa13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 SMAD9O15198 467 aaKnown RBP13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 DUS4LO95620 317 aaKnown RBP13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 RAB6AP20340 208 aa13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 ACTR1BP42025 376 aa13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 RPS27P42677 84 aaKnown RBP13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 ACTR1AP61163 376 aa13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 CDNFQ49AH0 187 aa13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 C2orf27AQ580R0 203 aa13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 ASPHD2Q6ICH7 369 aa13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 DRAM2Q6UX65 266 aa13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 LRRC69Q6ZNQ3 347 aa13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 OR1E3Q8WZA6 343 aa13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 KXD1Q9BQD3 176 aa13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 CST11Q9H112 138 aa13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 TLNRD1Q9H1K6 362 aa13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 CHMP1AQ9HD42 196 aaPredicted RBP13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 TREM1Q9NP99 234 aa13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 GTF2A1LQ9UNN4 478 aa13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 DTX4Q9Y2E6 619 aa13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 XKRYO14609 159 aa13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 CRHP06850 196 aa13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 ABOP16442 354 aa13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 C1orf53Q5VUE5 145 aa13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 SFT2D1Q8WV19 159 aa13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 CMKLR1Q99788 373 aa13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 CCDC3Q9BQI4 270 aa13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 NUDT9Q9BW91 350 aa13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 FANCFQ9NPI8 374 aa13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 TAS2R4Q9NYW5 299 aa13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 SLC22A13Q9Y226 551 aa13.34□□□□□ -0.27
CACNA1A-220ENST00000635988 TBC1D3DA0A087WVF3 549 aa13.33□□□□□ -0.28
CACNA1A-220ENST00000635988 TBC1D3LB9A6J9 549 aa13.33□□□□□ -0.28
CACNA1A-220ENST00000635988 SLC31A1O15431 190 aa13.33□□□□□ -0.28
CACNA1A-220ENST00000635988 HLA-DQA2P01906 255 aa13.33□□□□□ -0.28
CACNA1A-220ENST00000635988 TBC1D3HP0C7X1 549 aa13.33□□□□□ -0.28
CACNA1A-220ENST00000635988 PGAM2P15259 253 aa13.33□□□□□ -0.28
CACNA1A-220ENST00000635988 CX3CR1P49238 355 aa13.33□□□□□ -0.28
CACNA1A-220ENST00000635988 PJVKQ0ZLH3 352 aa13.33□□□□□ -0.28
CACNA1A-220ENST00000635988 NKPD1Q17RQ9 610 aa13.33□□□□□ -0.28
CACNA1A-220ENST00000635988 SWI5Q1ZZU3 235 aa13.33□□□□□ -0.28
CACNA1A-220ENST00000635988 TBC1D3CQ6IPX1 549 aa13.33□□□□□ -0.28
CACNA1A-220ENST00000635988 PARGQ86W56 976 aa13.33□□□□□ -0.28
CACNA1A-220ENST00000635988 TBC1D3Q8IZP1 549 aaPredicted RBP13.33□□□□□ -0.28
CACNA1A-220ENST00000635988 AQP3Q92482 292 aa13.33□□□□□ -0.28
CACNA1A-220ENST00000635988 SLC25A44Q96H78 314 aaPredicted RBP13.33□□□□□ -0.28
CACNA1A-220ENST00000635988 NMES1Q9C002 83 aa13.33□□□□□ -0.28
CACNA1A-220ENST00000635988 UQCC1Q9NVA1 299 aa13.33□□□□□ -0.28
CACNA1A-220ENST00000635988 GDE1Q9NZC3 331 aa13.33□□□□□ -0.28
CACNA1A-220ENST00000635988 MRPS33Q9Y291 106 aaKnown RBP13.33□□□□□ -0.28
CACNA1A-220ENST00000635988 MRPS18BQ9Y676 258 aaKnown RBP13.33□□□□□ -0.28
CACNA1A-220ENST00000635988 STK17BO94768 372 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms