RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 XKRYO14609 159 aa20.46■□□□□ 0.87
ATXN3-253ENST00000621269 MSR1P21757 451 aa20.46■□□□□ 0.87
ATXN3-253ENST00000621269 GPR4P46093 362 aa20.46■□□□□ 0.87
ATXN3-253ENST00000621269 NUDT2P50583 147 aa20.46■□□□□ 0.87
ATXN3-253ENST00000621269 LMO4P61968 165 aa20.46■□□□□ 0.87
ATXN3-253ENST00000621269 HFEQ30201 348 aa20.46■□□□□ 0.87
ATXN3-253ENST00000621269 AVPI1Q5T686 147 aa20.46■□□□□ 0.87
ATXN3-253ENST00000621269 ARL9Q6T311 187 aa20.46■□□□□ 0.87
ATXN3-253ENST00000621269 HACD2Q6Y1H2 254 aa20.46■□□□□ 0.87
ATXN3-253ENST00000621269 FOXL2NBQ6ZUU3 175 aa20.46■□□□□ 0.87
ATXN3-253ENST00000621269 TMPRSS11FQ6ZWK6 438 aa20.46■□□□□ 0.87
ATXN3-253ENST00000621269 USP51Q70EK9 711 aa20.46■□□□□ 0.87
ATXN3-253ENST00000621269 IPCEF1Q8WWN9 437 aaPredicted RBP20.46■□□□□ 0.87
ATXN3-253ENST00000621269 MED4Q9NPJ6 270 aa20.46■□□□□ 0.87
ATXN3-253ENST00000621269 METRNQ9UJH8 293 aa20.46■□□□□ 0.87
ATXN3-253ENST00000621269 ANPEPP15144 967 aa20.45■□□□□ 0.86
ATXN3-253ENST00000621269 MPV17P39210 176 aa20.45■□□□□ 0.86
ATXN3-253ENST00000621269 ARHGDIAP52565 204 aa20.45■□□□□ 0.86
ATXN3-253ENST00000621269 PPP1CBP62140 327 aa20.45■□□□□ 0.86
ATXN3-253ENST00000621269 ZBED5Q49AG3 693 aa20.45■□□□□ 0.86
ATXN3-253ENST00000621269 MBNL2Q5VZF2 373 aaKnown RBP20.45■□□□□ 0.86
ATXN3-253ENST00000621269 ZNF774Q6NX45 483 aa20.45■□□□□ 0.86
ATXN3-253ENST00000621269 C8orf82Q6P1X6 216 aaPredicted RBP20.45■□□□□ 0.86
ATXN3-253ENST00000621269 SYT9Q86SS6 491 aa20.45■□□□□ 0.86
ATXN3-253ENST00000621269 KLF14Q8TD94 323 aaPredicted RBP20.45■□□□□ 0.86
ATXN3-253ENST00000621269 LRRC37BQ96QE4 947 aa20.45■□□□□ 0.86
ATXN3-253ENST00000621269 OR2J1Q9GZK6 312 aa20.45■□□□□ 0.86
ATXN3-253ENST00000621269 ANKRD19PQ9H560 264 aa20.45■□□□□ 0.86
ATXN3-253ENST00000621269 NMNAT1Q9HAN9 279 aaPredicted RBP20.45■□□□□ 0.86
ATXN3-253ENST00000621269 ELOVL3Q9HB03 270 aa20.45■□□□□ 0.86
ATXN3-253ENST00000621269 CYSLTR2Q9NS75 346 aa20.45■□□□□ 0.86
ATXN3-253ENST00000621269 RPS6KA6Q9UK32 745 aa20.45■□□□□ 0.86
ATXN3-253ENST00000621269 TMEM5Q9Y2B1 443 aa20.45■□□□□ 0.86
ATXN3-253ENST00000621269 ENPP4Q9Y6X5 453 aa20.45■□□□□ 0.86
ATXN3-253ENST00000621269 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.45■□□□□ 0.86
ATXN3-253ENST00000621269 CLDN25C9JDP6 229 aa20.44■□□□□ 0.86
ATXN3-253ENST00000621269 H7C1C5 153 aa20.44■□□□□ 0.86
ATXN3-253ENST00000621269 CDC42EP2O14613 210 aa20.44■□□□□ 0.86
ATXN3-253ENST00000621269 SPRY3O43610 288 aa20.44■□□□□ 0.86
ATXN3-253ENST00000621269 PRSS23O95084 383 aa20.44■□□□□ 0.86
ATXN3-253ENST00000621269 CD14P08571 375 aa20.44■□□□□ 0.86
ATXN3-253ENST00000621269 LIPAP38571 399 aa20.44■□□□□ 0.86
ATXN3-253ENST00000621269 LCN6P62502 163 aa20.44■□□□□ 0.86
ATXN3-253ENST00000621269 FAM209AQ5JX71 171 aa20.44■□□□□ 0.86
ATXN3-253ENST00000621269 TREML1Q86YW5 311 aa20.44■□□□□ 0.86
ATXN3-253ENST00000621269 ELMOD3Q96FG2 381 aa20.44■□□□□ 0.86
ATXN3-253ENST00000621269 TIMD4Q96H15 378 aa20.44■□□□□ 0.86
ATXN3-253ENST00000621269 C4orf45Q96LM5 186 aa20.44■□□□□ 0.86
ATXN3-253ENST00000621269 WACQ9BTA9 647 aa20.44■□□□□ 0.86
ATXN3-253ENST00000621269 ZNF665Q9H7R5 613 aa20.44■□□□□ 0.86
ATXN3-253ENST00000621269 POLE4Q9NR33 117 aa20.44■□□□□ 0.86
ATXN3-253ENST00000621269 NDRG4Q9ULP0 352 aaKnown RBP20.44■□□□□ 0.86
ATXN3-253ENST00000621269 ADAM18Q9Y3Q7 739 aa20.44■□□□□ 0.86
ATXN3-253ENST00000621269 FAM32AQ9Y421 112 aaKnown RBP20.44■□□□□ 0.86
ATXN3-253ENST00000621269 STAB1Q9NY15 2570 aa20.44■□□□□ 0.86
ATXN3-253ENST00000621269 TRAV20A0A0B4J274 112 aa20.43■□□□□ 0.86
ATXN3-253ENST00000621269 AHCYL1O43865 530 aa20.43■□□□□ 0.86
ATXN3-253ENST00000621269 IGHV1-46P01743 117 aa20.43■□□□□ 0.86
ATXN3-253ENST00000621269 NCK1P16333 377 aa20.43■□□□□ 0.86
ATXN3-253ENST00000621269 MMP15P51511 669 aa20.43■□□□□ 0.86
ATXN3-253ENST00000621269 ENDOGQ14249 297 aaKnown RBP20.43■□□□□ 0.86
ATXN3-253ENST00000621269 ACSM5Q6NUN0 579 aa20.43■□□□□ 0.86
ATXN3-253ENST00000621269 SHQ1Q6PI26 577 aaKnown RBP20.43■□□□□ 0.86
ATXN3-253ENST00000621269 RFPL4BQ6ZWI9 263 aa20.43■□□□□ 0.86
ATXN3-253ENST00000621269 FAM156AQ8NDB6 213 aa20.43■□□□□ 0.86
ATXN3-253ENST00000621269 RAB1CQ92928 201 aa20.43■□□□□ 0.86
ATXN3-253ENST00000621269 CMTM5Q96DZ9 223 aa20.43■□□□□ 0.86
ATXN3-253ENST00000621269 ZNF570Q96NI8 536 aa20.43■□□□□ 0.86
ATXN3-253ENST00000621269 EGLN1Q9GZT9 426 aa20.43■□□□□ 0.86
ATXN3-253ENST00000621269 CGGBP1Q9UFW8 167 aaPredicted RBP20.43■□□□□ 0.86
ATXN3-253ENST00000621269 H3BSA7 217 aa20.42■□□□□ 0.86
ATXN3-253ENST00000621269 ICMTO60725 284 aa20.42■□□□□ 0.86
ATXN3-253ENST00000621269 NGFP01138 241 aa20.42■□□□□ 0.86
ATXN3-253ENST00000621269 ZMAT1Q5H9K5 638 aa20.42■□□□□ 0.86
ATXN3-253ENST00000621269 FAHD2BQ6P2I3 314 aaPredicted RBP20.42■□□□□ 0.86
ATXN3-253ENST00000621269 SLC7A13Q8TCU3 470 aa20.42■□□□□ 0.86
ATXN3-253ENST00000621269 CCL17Q92583 94 aa20.42■□□□□ 0.86
ATXN3-253ENST00000621269 RAB39BQ96DA2 213 aa20.42■□□□□ 0.86
ATXN3-253ENST00000621269 FAHD2AQ96GK7 314 aa20.42■□□□□ 0.86
ATXN3-253ENST00000621269 FAM46AQ96IP4 442 aaKnown RBP20.42■□□□□ 0.86
ATXN3-253ENST00000621269 Q96M85 177 aa20.42■□□□□ 0.86
ATXN3-253ENST00000621269 OCEL1Q9H607 264 aa20.42■□□□□ 0.86
ATXN3-253ENST00000621269 METTL17Q9H7H0 456 aaPredicted RBP20.42■□□□□ 0.86
ATXN3-253ENST00000621269 EMC7Q9NPA0 242 aa20.42■□□□□ 0.86
ATXN3-253ENST00000621269 GMNNO75496 209 aa20.41■□□□□ 0.86
ATXN3-253ENST00000621269 SCG5P05408 212 aa20.41■□□□□ 0.86
ATXN3-253ENST00000621269 H1F0P07305 194 aaKnown RBP20.41■□□□□ 0.86
ATXN3-253ENST00000621269 PSME3P61289 254 aa20.41■□□□□ 0.86
ATXN3-253ENST00000621269 SCRN3Q0VDG4 424 aa20.41■□□□□ 0.86
ATXN3-253ENST00000621269 SCGB2A2Q13296 93 aa20.41■□□□□ 0.86
ATXN3-253ENST00000621269 MESTQ5EB52 335 aa20.41■□□□□ 0.86
ATXN3-253ENST00000621269 DIRC2Q96SL1 478 aa20.41■□□□□ 0.86
ATXN3-253ENST00000621269 ZDHHC8Q9ULC8 765 aa20.41■□□□□ 0.86
ATXN3-253ENST00000621269 WIPI2Q9Y4P8 454 aa20.41■□□□□ 0.86
ATXN3-253ENST00000621269 CACNG2Q9Y698 323 aa20.41■□□□□ 0.86
ATXN3-253ENST00000621269 A0A1W2PRQ8 180 aa20.4■□□□□ 0.86
ATXN3-253ENST00000621269 PRSS37A4D1T9 235 aa20.4■□□□□ 0.86
ATXN3-253ENST00000621269 ZSCAN5BA6NJL1 495 aa20.4■□□□□ 0.86
ATXN3-253ENST00000621269 NDUFB2O95178 105 aa20.4■□□□□ 0.86
ATXN3-253ENST00000621269 ABHD16AO95870 558 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms