RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 FAM71E2Q8N5Q1 922 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 SARGQ9BW04 601 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 BANF2Q9H503 90 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 HEYLQ9NQ87 328 aaPredicted RBP10.37□□□□□ -0.75
CLIP1-219ENST00000620786 CGGBP1Q9UFW8 167 aaPredicted RBP10.37□□□□□ -0.75
CLIP1-219ENST00000620786 ETV7Q9Y603 341 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 A0A087WV62 115 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 IGHV1OR15-9A0A0B4J2B8 117 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 B4GALT3O60512 393 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 GPX2P18283 190 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 BSGP35613 385 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 HBG1P69891 147 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 HBG2P69892 147 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 OR2A2Q6IF42 318 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 MAVSQ7Z434 540 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 BTLAQ7Z6A9 289 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 RIMS4Q9H426 269 aaPredicted RBP10.37□□□□□ -0.75
CLIP1-219ENST00000620786 OPA3Q9H6K4 179 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 FSCN3Q9NQT6 498 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 HSBP1L1C9JCN9 74 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 LGALS8O00214 317 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 MEOX1P50221 254 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 SRSF5Q13243 272 aaKnown RBP10.37□□□□□ -0.75
CLIP1-219ENST00000620786 FGFBP1Q14512 234 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 PHLDA2Q53GA4 152 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 EMC4Q5J8M3 183 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 OR51D1Q8NGF3 324 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 OR6M1Q8NGM8 313 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 CA5BP1Q8WTZ4 195 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 TAS2R4Q9NYW5 299 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 ZC3H12DA2A288 527 aaKnown RBP10.37□□□□□ -0.75
CLIP1-219ENST00000620786 E9PI62 339 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 PIGAP37287 484 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 INSM1Q01101 510 aaPredicted RBP10.37□□□□□ -0.75
CLIP1-219ENST00000620786 FOXF1Q12946 379 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 IL11RAQ14626 422 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 SPRED1Q7Z699 444 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 CCDC28AQ8IWP9 274 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 OR2L13Q8N349 312 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 BEST4Q8NFU0 473 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 SPACA9Q96E40 222 aaPredicted RBP10.37□□□□□ -0.75
CLIP1-219ENST00000620786 ERVMER34-1Q9H9K5 563 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 KCNJ16Q9NPI9 418 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 FBXL4Q9UKA2 621 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 MICAL3Q7RTP6 2002 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 CLDN24A6NM45 220 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 M0R135 149 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 SRMP19623 302 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 LAP3P28838 519 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 SRP9P49458 86 aaKnown RBP10.37□□□□□ -0.75
CLIP1-219ENST00000620786 PLA2G7Q13093 441 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 XKR7Q5GH72 579 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 H2BFWTQ7Z2G1 175 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 PARP16Q8N5Y8 322 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 OR2I1PQ8NGU4 316 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 ISL2Q96A47 359 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 FBXO17Q96EF6 278 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 ZNF799Q96GE5 643 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 FAM53CQ9NYF3 392 aa10.37□□□□□ -0.75
CLIP1-219ENST00000620786 MYH7BA7E2Y1 1941 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 CRYM-AS1A6NIL9 109 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 M0QYG6 137 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 CSF3P09919 207 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 GDNFP39905 211 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 SORDQ00796 357 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 SPCS2Q15005 226 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 TMEM92Q6UXU6 159 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 CAMKMTQ7Z624 323 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 NLRP8Q86W28 1048 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 DNAJC5GQ8N7S2 189 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 NUDT8Q8WV74 236 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 KCTD12Q96CX2 325 aaKnown RBP10.36□□□□□ -0.75
CLIP1-219ENST00000620786 ARSGQ96EG1 525 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 RPS10P5Q9NQ39 176 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 C19orf12Q9NSK7 152 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 LOC107986453A0A1B0GWG9 222 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 XRCC2O43543 280 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 SUB1P53999 127 aaKnown RBP eCLIP10.36□□□□□ -0.75
CLIP1-219ENST00000620786 RPL18Q07020 188 aaKnown RBP10.36□□□□□ -0.75
CLIP1-219ENST00000620786 FZD2Q14332 565 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 NOXA1Q86UR1 476 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 VASH2Q86V25 355 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 CLDN22Q8N7P3 220 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 DVL3Q92997 716 aaPredicted RBP10.36□□□□□ -0.75
CLIP1-219ENST00000620786 SAT2Q96F10 170 aaPredicted RBP10.36□□□□□ -0.75
CLIP1-219ENST00000620786 ZNF71Q9NQZ8 489 aaPredicted RBP10.36□□□□□ -0.75
CLIP1-219ENST00000620786 ACOXLQ9NUZ1 547 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 P4HTMQ9NXG6 502 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 LTBP4Q8N2S1 1624 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 ECM29Q5VYK3 1845 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 ANKUB1A6NFN9 424 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 TNFSF14O43557 240 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 ETV6P41212 452 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 FABP6P51161 128 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 HCCSP53701 268 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 ZFAND2BQ8WV99 257 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 MOB1AQ9H8S9 216 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 CPNE5Q9HCH3 593 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 TXNL4BQ9NX01 149 aaKnown RBP10.36□□□□□ -0.75
CLIP1-219ENST00000620786 MED29Q9NX70 200 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms