RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 ZNF584Q8IVC4 421 aa11.88□□□□□ -0.51
NEK3-210ENST00000620675 C17orf78Q8N4C9 275 aa11.88□□□□□ -0.51
NEK3-210ENST00000620675 ZNF555Q8NEP9 628 aa11.88□□□□□ -0.51
NEK3-210ENST00000620675 RHOXF1Q8NHV9 184 aa11.88□□□□□ -0.51
NEK3-210ENST00000620675 CNIH3Q8TBE1 160 aa11.88□□□□□ -0.51
NEK3-210ENST00000620675 ZNF582Q96NG8 517 aaPredicted RBP11.88□□□□□ -0.51
NEK3-210ENST00000620675 TEAD3Q99594 435 aa11.88□□□□□ -0.51
NEK3-210ENST00000620675 TEX12Q9BXU0 123 aa11.88□□□□□ -0.51
NEK3-210ENST00000620675 ASH2LQ9UBL3 628 aa11.88□□□□□ -0.51
NEK3-210ENST00000620675 NDRG3Q9UGV2 375 aa11.88□□□□□ -0.51
NEK3-210ENST00000620675 PCDHGB5Q9Y5G0 923 aa11.88□□□□□ -0.51
NEK3-210ENST00000620675 VPS13CQ709C8 3753 aa11.87□□□□□ -0.51
NEK3-210ENST00000620675 ARPC4-TTLL3A0A0A6YYG9 625 aa11.87□□□□□ -0.51
NEK3-210ENST00000620675 WBP4O75554 376 aaKnown RBP11.87□□□□□ -0.51
NEK3-210ENST00000620675 GLCEO94923 617 aa11.87□□□□□ -0.51
NEK3-210ENST00000620675 NPR2P20594 1047 aa11.87□□□□□ -0.51
NEK3-210ENST00000620675 NAA10P41227 235 aaPredicted RBP11.87□□□□□ -0.51
NEK3-210ENST00000620675 UBE2NP61088 152 aaKnown RBP11.87□□□□□ -0.51
NEK3-210ENST00000620675 RAB1AP62820 205 aa11.87□□□□□ -0.51
NEK3-210ENST00000620675 SPOCK1Q08629 439 aa11.87□□□□□ -0.51
NEK3-210ENST00000620675 LAIR2Q6ISS4 152 aa11.87□□□□□ -0.51
NEK3-210ENST00000620675 AKR7LQ8NHP1 331 aa11.87□□□□□ -0.51
NEK3-210ENST00000620675 HSD17B8Q92506 261 aa11.87□□□□□ -0.51
NEK3-210ENST00000620675 HS3ST6Q96QI5 342 aa11.87□□□□□ -0.51
NEK3-210ENST00000620675 VCXQ9H320 206 aa11.87□□□□□ -0.51
NEK3-210ENST00000620675 AMBNQ9NP70 447 aa11.87□□□□□ -0.51
NEK3-210ENST00000620675 A0A1W2PPR1 153 aa11.87□□□□□ -0.51
NEK3-210ENST00000620675 DEFB108AA8MXU0 73 aa11.87□□□□□ -0.51
NEK3-210ENST00000620675 RER1O15258 196 aa11.87□□□□□ -0.51
NEK3-210ENST00000620675 EPXP11678 715 aa11.87□□□□□ -0.51
NEK3-210ENST00000620675 CCL2P13500 99 aa11.87□□□□□ -0.51
NEK3-210ENST00000620675 FMO3P31513 532 aa11.87□□□□□ -0.51
NEK3-210ENST00000620675 IDH3GP51553 393 aaPredicted RBP11.87□□□□□ -0.51
NEK3-210ENST00000620675 ISL1P61371 349 aa11.87□□□□□ -0.51
NEK3-210ENST00000620675 PSG4Q00888 419 aa11.87□□□□□ -0.51
NEK3-210ENST00000620675 RAB39AQ14964 217 aa11.87□□□□□ -0.51
NEK3-210ENST00000620675 KCNMB1Q16558 191 aa11.87□□□□□ -0.51
NEK3-210ENST00000620675 NXNL2Q5VZ03 156 aa11.87□□□□□ -0.51
NEK3-210ENST00000620675 CFAP77Q6ZQR2 320 aa11.87□□□□□ -0.51
NEK3-210ENST00000620675 USP51Q70EK9 711 aa11.87□□□□□ -0.51
NEK3-210ENST00000620675 SHFQ7M4L6 423 aa11.87□□□□□ -0.51
NEK3-210ENST00000620675 ERI1Q8IV48 349 aaKnown RBP11.87□□□□□ -0.51
NEK3-210ENST00000620675 TIGD4Q8IY51 512 aa11.87□□□□□ -0.51
NEK3-210ENST00000620675 CPEB3Q8NE35 698 aaKnown RBP11.87□□□□□ -0.51
NEK3-210ENST00000620675 MUCL1Q96DR8 90 aa11.87□□□□□ -0.51
NEK3-210ENST00000620675 PRRG3Q9BZD7 231 aa11.87□□□□□ -0.51
NEK3-210ENST00000620675 OR10A4Q9H209 315 aa11.87□□□□□ -0.51
NEK3-210ENST00000620675 IGHV1-18A0A0C4DH31 117 aa11.86□□□□□ -0.51
NEK3-210ENST00000620675 DPRXA6NFQ7 191 aa11.86□□□□□ -0.51
NEK3-210ENST00000620675 M0R1B8 84 aa11.86□□□□□ -0.51
NEK3-210ENST00000620675 PRODHO43272 600 aa11.86□□□□□ -0.51
NEK3-210ENST00000620675 FARS2O95363 451 aaKnown RBP11.86□□□□□ -0.51
NEK3-210ENST00000620675 CST2P09228 141 aa11.86□□□□□ -0.51
NEK3-210ENST00000620675 LOXP28300 417 aaPredicted RBP11.86□□□□□ -0.51
NEK3-210ENST00000620675 HOXC12P31275 282 aa11.86□□□□□ -0.51
NEK3-210ENST00000620675 SNRPGP62308 76 aaKnown RBP11.86□□□□□ -0.51
NEK3-210ENST00000620675 ADAM8P78325 824 aa11.86□□□□□ -0.51
NEK3-210ENST00000620675 IL5RAQ01344 420 aa11.86□□□□□ -0.51
NEK3-210ENST00000620675 MAD2L1BPQ15013 274 aaPredicted RBP11.86□□□□□ -0.51
NEK3-210ENST00000620675 SNCBQ16143 134 aa11.86□□□□□ -0.51
NEK3-210ENST00000620675 GSG1Q2KHT4 349 aa11.86□□□□□ -0.51
NEK3-210ENST00000620675 TTC23Q5W5X9 447 aa11.86□□□□□ -0.51
NEK3-210ENST00000620675 ZNF787Q6DD87 383 aa11.86□□□□□ -0.51
NEK3-210ENST00000620675 ZNF774Q6NX45 483 aa11.86□□□□□ -0.51
NEK3-210ENST00000620675 TMEM154Q6P9G4 183 aa11.86□□□□□ -0.51
NEK3-210ENST00000620675 MEPCEQ7L2J0 689 aaKnown RBP11.86□□□□□ -0.51
NEK3-210ENST00000620675 P2RY8Q86VZ1 359 aa11.86□□□□□ -0.51
NEK3-210ENST00000620675 RFLNBQ8N5W9 214 aa11.86□□□□□ -0.51
NEK3-210ENST00000620675 SLC7A6Q92536 515 aa11.86□□□□□ -0.51
NEK3-210ENST00000620675 DACH2Q96NX9 599 aa11.86□□□□□ -0.51
NEK3-210ENST00000620675 AMELYQ99218 206 aa11.86□□□□□ -0.51
NEK3-210ENST00000620675 RHNO1Q9BSD3 238 aa11.86□□□□□ -0.51
NEK3-210ENST00000620675 WNT5BQ9H1J7 359 aa11.86□□□□□ -0.51
NEK3-210ENST00000620675 CYB5R1Q9UHQ9 305 aa11.86□□□□□ -0.51
NEK3-210ENST00000620675 KCNG2Q9UJ96 466 aa11.86□□□□□ -0.51
NEK3-210ENST00000620675 KLHDC2Q9Y2U9 406 aa11.86□□□□□ -0.51
NEK3-210ENST00000620675 DSCAMO60469 2012 aa11.86□□□□□ -0.51
NEK3-210ENST00000620675 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.85□□□□□ -0.51
NEK3-210ENST00000620675 H0YJX3 145 aa11.85□□□□□ -0.51
NEK3-210ENST00000620675 ZNF593O00488 134 aaPredicted RBP11.85□□□□□ -0.51
NEK3-210ENST00000620675 PLAUP00749 431 aa11.85□□□□□ -0.51
NEK3-210ENST00000620675 PPP3CBP16298 524 aa11.85□□□□□ -0.51
NEK3-210ENST00000620675 ZNF14P17017 642 aaPredicted RBP11.85□□□□□ -0.51
NEK3-210ENST00000620675 CRYGSP22914 178 aa11.85□□□□□ -0.51
NEK3-210ENST00000620675 GUCA1AP43080 201 aaPredicted RBP11.85□□□□□ -0.51
NEK3-210ENST00000620675 CDH11P55287 796 aa11.85□□□□□ -0.51
NEK3-210ENST00000620675 NRN1LQ496H8 165 aa11.85□□□□□ -0.51
NEK3-210ENST00000620675 PABPC1L2AQ5JQF8 200 aa11.85□□□□□ -0.51
NEK3-210ENST00000620675 DPY19L4Q7Z388 723 aa11.85□□□□□ -0.51
NEK3-210ENST00000620675 ZNF295-AS1Q8N0V1 137 aa11.85□□□□□ -0.51
NEK3-210ENST00000620675 PAQR4Q8N4S7 273 aaPredicted RBP11.85□□□□□ -0.51
NEK3-210ENST00000620675 OR10S1Q8NGN2 331 aa11.85□□□□□ -0.51
NEK3-210ENST00000620675 MAP6Q96JE9 813 aa11.85□□□□□ -0.51
NEK3-210ENST00000620675 SPOCK3Q9BQ16 436 aa11.85□□□□□ -0.51
NEK3-210ENST00000620675 TTTY10Q9BZA0 68 aa11.85□□□□□ -0.51
NEK3-210ENST00000620675 RNF121Q9H920 327 aa11.85□□□□□ -0.51
NEK3-210ENST00000620675 MARCH7Q9H992 704 aa11.85□□□□□ -0.51
NEK3-210ENST00000620675 POLR1DQ9Y2S0 133 aa11.85□□□□□ -0.51
NEK3-210ENST00000620675 AMDHD2Q9Y303 409 aa11.85□□□□□ -0.51
NEK3-210ENST00000620675 ANKRD17O75179 2603 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms