RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 GIPC3Q8TF64 312 aa7.11□□□□□ -1.27
NEK3-209ENST00000618856 TRMT61AQ96FX7 289 aaKnown RBP7.11□□□□□ -1.27
NEK3-209ENST00000618856 PERPQ96FX8 193 aa7.11□□□□□ -1.27
NEK3-209ENST00000618856 NMNAT3Q96T66 252 aa7.11□□□□□ -1.27
NEK3-209ENST00000618856 IFT27Q9BW83 186 aa7.11□□□□□ -1.27
NEK3-209ENST00000618856 RBM4Q9BWF3 364 aaKnown RBP7.11□□□□□ -1.27
NEK3-209ENST00000618856 CACNG6Q9BXT2 260 aa7.11□□□□□ -1.27
NEK3-209ENST00000618856 HEATR1Q9H583 2144 aaKnown RBP7.11□□□□□ -1.27
NEK3-209ENST00000618856 ATPIF1Q9UII2 106 aa7.11□□□□□ -1.27
NEK3-209ENST00000618856 FBXO9Q9UK97 447 aaPredicted RBP7.11□□□□□ -1.27
NEK3-209ENST00000618856 POU2F3Q9UKI9 436 aa7.11□□□□□ -1.27
NEK3-209ENST00000618856 BAIAP2Q9UQB8 552 aa7.11□□□□□ -1.27
NEK3-209ENST00000618856 COA3Q9Y2R0 106 aaPredicted RBP7.11□□□□□ -1.27
NEK3-209ENST00000618856 FKBP7Q9Y680 259 aa7.11□□□□□ -1.27
NEK3-209ENST00000618856 NSD1Q96L73 2696 aaPredicted RBP7.11□□□□□ -1.27
NEK3-209ENST00000618856 IGLV3-9A0A075B6K5 115 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 OR6C6A6NF89 314 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 GPRIN2O60269 458 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 NDUFS7O75251 213 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 MPZL1O95297 269 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 F12P00748 615 aaPredicted RBP7.1□□□□□ -1.27
NEK3-209ENST00000618856 TFP02787 698 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 ANXA8P13928 327 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 ZNF250P15622 560 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 STOMP27105 288 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 GGT2P36268 569 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 WNT5AP41221 380 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 PPOXP50336 477 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 SLC25A1P53007 311 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 UCP2P55851 309 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 ATP5J2P56134 94 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 ACTR3P61158 418 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 CDK5Q00535 292 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 HSF2Q03933 536 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.1□□□□□ -1.27
NEK3-209ENST00000618856 SNTB2Q13425 540 aaKnown RBP7.1□□□□□ -1.27
NEK3-209ENST00000618856 AQP6Q13520 282 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 SGCAQ16586 387 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 PCK2Q16822 640 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 TBC1D28Q2M2D7 210 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 LEG1Q6P5S2 330 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 DNM1P34Q6PK57 102 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 C1orf174Q8IYL3 243 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 SLC37A3Q8NCC5 494 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 OR2T33Q8NG76 320 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 OR52E2Q8NGJ4 325 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 OR1J2Q8NGS2 313 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 OR4K13Q8NH42 304 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 ZNRF4Q8WWF5 429 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 DNAJC9Q8WXX5 260 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 C11orf40Q8WZ69 217 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 MRPL24Q96A35 216 aaKnown RBP7.1□□□□□ -1.27
NEK3-209ENST00000618856 COX4I2Q96KJ9 171 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 TSSK2Q96PF2 358 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 KCNS3Q9BQ31 491 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 GABARAPL1Q9H0R8 117 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 KCNN2Q9H2S1 579 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 BARX1Q9HBU1 254 aaPredicted RBP7.1□□□□□ -1.27
NEK3-209ENST00000618856 EMC7Q9NPA0 242 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 MRPL22Q9NWU5 206 aaKnown RBP7.1□□□□□ -1.27
NEK3-209ENST00000618856 PDP1Q9P0J1 537 aaPredicted RBP7.1□□□□□ -1.27
NEK3-209ENST00000618856 GDF2Q9UK05 429 aaPredicted RBP7.1□□□□□ -1.27
NEK3-209ENST00000618856 SPEF1Q9Y4P9 236 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 LHFPL6Q9Y693 200 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 ARFGEF3Q5TH69 2177 aa7.1□□□□□ -1.27
NEK3-209ENST00000618856 SETD2Q9BYW2 2564 aaPredicted RBP7.09□□□□□ -1.27
NEK3-209ENST00000618856 A0A096LNT2 108 aa7.09□□□□□ -1.27
NEK3-209ENST00000618856 IQCMA0A1B0GVH7 501 aa7.09□□□□□ -1.27
NEK3-209ENST00000618856 A0A1W2PPL8 197 aa7.09□□□□□ -1.27
NEK3-209ENST00000618856 SYNGR3O43761 229 aa7.09□□□□□ -1.27
NEK3-209ENST00000618856 DEAF1O75398 565 aaPredicted RBP7.09□□□□□ -1.27
NEK3-209ENST00000618856 TIPRLO75663 272 aa7.09□□□□□ -1.27
NEK3-209ENST00000618856 RENP00797 406 aa7.09□□□□□ -1.27
NEK3-209ENST00000618856 BMP4P12644 408 aa7.09□□□□□ -1.27
NEK3-209ENST00000618856 CCL2P13500 99 aa7.09□□□□□ -1.27
NEK3-209ENST00000618856 OSMP13725 252 aa7.09□□□□□ -1.27
NEK3-209ENST00000618856 CD99P14209 185 aa7.09□□□□□ -1.27
NEK3-209ENST00000618856 APEX1P27695 318 aaKnown RBP7.09□□□□□ -1.27
NEK3-209ENST00000618856 GRK5P34947 590 aa7.09□□□□□ -1.27
NEK3-209ENST00000618856 RAD52P43351 418 aa7.09□□□□□ -1.27
NEK3-209ENST00000618856 EFNA4P52798 201 aa7.09□□□□□ -1.27
NEK3-209ENST00000618856 EFNB1P98172 346 aa7.09□□□□□ -1.27
NEK3-209ENST00000618856 GLO1Q04760 184 aa7.09□□□□□ -1.27
NEK3-209ENST00000618856 PLP2Q04941 152 aa7.09□□□□□ -1.27
NEK3-209ENST00000618856 SCRN3Q0VDG4 424 aa7.09□□□□□ -1.27
NEK3-209ENST00000618856 RSPO1Q2MKA7 263 aaPredicted RBP7.09□□□□□ -1.27
NEK3-209ENST00000618856 SLC36A3Q495N2 470 aa7.09□□□□□ -1.27
NEK3-209ENST00000618856 CCDC92Q53HC0 331 aaPredicted RBP7.09□□□□□ -1.27
NEK3-209ENST00000618856 TEX30Q5JUR7 227 aa7.09□□□□□ -1.27
NEK3-209ENST00000618856 CLEC12AQ5QGZ9 265 aa7.09□□□□□ -1.27
NEK3-209ENST00000618856 LINC01590Q5TEZ4 76 aa7.09□□□□□ -1.27
NEK3-209ENST00000618856 KRT80Q6KB66 452 aa7.09□□□□□ -1.27
NEK3-209ENST00000618856 SLC18B1Q6NT16 456 aa7.09□□□□□ -1.27
NEK3-209ENST00000618856 ZNF774Q6NX45 483 aa7.09□□□□□ -1.27
NEK3-209ENST00000618856 VASH1Q7L8A9 365 aaPredicted RBP7.09□□□□□ -1.27
NEK3-209ENST00000618856 JAZF1Q86VZ6 243 aa7.09□□□□□ -1.27
NEK3-209ENST00000618856 ZNF101Q8IZC7 436 aa7.09□□□□□ -1.27
NEK3-209ENST00000618856 HS3ST5Q8IZT8 346 aa7.09□□□□□ -1.27
NEK3-209ENST00000618856 PARP8Q8N3A8 854 aa7.09□□□□□ -1.27
NEK3-209ENST00000618856 SDR9C7Q8NEX9 313 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms