RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 WNT6Q9Y6F9 365 aa9.42□□□□□ -0.9
TNFAIP3-208ENST00000615468 A0A087WZY1 265 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 C9orf170A2RU37 121 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 ERI3O43414 337 aaKnown RBP9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 CRHP06850 196 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 SFTPBP07988 381 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 POLR2LP62875 67 aaKnown RBP9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 GAS6Q14393 721 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 RHEBQ15382 184 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 SLC9A3R2Q15599 337 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 HMGN3Q15651 99 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 RAB11BQ15907 218 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 C2orf76Q3KRA6 126 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 ARHGAP11AQ6P4F7 1023 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 ANKRD16Q6P6B7 361 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 C10orf53Q8N6V4 93 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 CYB5D2Q8WUJ1 264 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 EDAQ92838 391 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 FAM3DQ96BQ1 224 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 TEX101Q9BY14 249 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 COMMD4Q9H0A8 199 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 TEX13DA0A0J9YY54 714 aaPredicted RBP9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 MED19A0JLT2 244 aaPredicted RBP9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 SMCO3A2RU48 225 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 MSGN1A6NI15 193 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 ZNF587BE7ETH6 402 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 TACSTD2P09758 323 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 MEF2DQ14814 521 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 GFI1BQ5VTD9 330 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 ANKRD33Q7Z3H0 272 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 PLPP7Q8NBV4 271 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 TIFAQ96CG3 184 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 RRNAD1Q96FB5 475 aaKnown RBP9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 CMKLR1Q99788 373 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 MS4A8Q9BY19 250 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 BCO1Q9HAY6 547 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 PRSS16Q9NQE7 514 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 FAM86C1Q9NVL1 165 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 CHD7Q9P2D1 2997 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 SIGLEC7Q9Y286 467 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 PCYT1BQ9Y5K3 369 aaPredicted RBP9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 TBC1D3EA0A087X179 549 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 A0A1B0GTI1 187 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 PLGP00747 810 aaPredicted RBP9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 FAM157CP0CG43 387 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 TSFMP43897 325 aaKnown RBP9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 NUBP1P53384 320 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 ELOCQ15369 112 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 WDR88Q6ZMY6 472 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 GRASPQ7Z6J2 395 aaPredicted RBP9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 ZSCAN4Q8NAM6 433 aaPredicted RBP9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 KDF1Q8NAX2 398 aaPredicted RBP9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 ASB17Q8WXJ9 295 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 FGF13Q92913 245 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 TMEM100Q9NV29 134 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 PRR13Q9NZ81 148 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 DNAJB11Q9UBS4 358 aa9.41□□□□□ -0.9
TNFAIP3-208ENST00000615468 PATJQ8NI35 1801 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 TBC1D3DA0A087WVF3 549 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 TBC1D3IA0A087WXS9 549 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 TBC1D3KA0A087X1G2 549 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 TBC1D3BA6NDS4 549 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 TBC1D3FA6NER0 549 aaPredicted RBP9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 TBC1D3LB9A6J9 549 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 KLF4O43474 513 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 TIMP1P01033 207 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 TBC1D3HP0C7X1 549 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 RPS27P42677 84 aaKnown RBP9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 FRKP42685 505 aaPredicted RBP9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 TBC1D3GQ6DHY5 549 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 TBC1D3CQ6IPX1 549 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 MAMDC2Q7Z304 686 aaPredicted RBP9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 TMEM25Q86YD3 366 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 TBC1D3Q8IZP1 549 aaPredicted RBP9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 ARL6IP6Q8N6S5 226 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 ZNF610Q8N9Z0 462 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 OR10AC1Q8NH08 325 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 SLC2A12Q8TD20 617 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 MITD1Q8WV92 249 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 SAT2Q96F10 170 aaPredicted RBP9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 THOC3Q96J01 351 aaKnown RBP9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 ZNF346Q9UL40 294 aaKnown RBP9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 ZNF780BQ9Y6R6 833 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 SLC5A10A0PJK1 596 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 DCDC2BA2VCK2 349 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 BLOC1S5-TXNDC5H3BN57 136 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 LMAN2Q12907 356 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 ERV3-1Q14264 604 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 NFATC4Q14934 902 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 OR4C11Q6IEV9 310 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 JAGN1Q8N5M9 183 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 OR5AR1Q8NGP9 310 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 C2orf15Q8WU43 125 aaKnown RBP9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 GLYATL1Q969I3 302 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 TCTN2Q96GX1 697 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 KLF16Q9BXK1 252 aaPredicted RBP9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 SLC46A2Q9BY10 475 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 SRA1Q9HD15 236 aaKnown RBP9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 ADAP2Q9NPF8 381 aa9.4□□□□□ -0.9
TNFAIP3-208ENST00000615468 SLC25A13Q9UJS0 675 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms