RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 ZNF823P16415 610 aa12.14□□□□□ -0.47
TMEM254-213ENST00000613758 PER3P56645 1201 aa12.14□□□□□ -0.47
TMEM254-213ENST00000613758 ACTC1P68032 377 aa12.14□□□□□ -0.47
TMEM254-213ENST00000613758 ACTA1P68133 377 aa12.14□□□□□ -0.47
TMEM254-213ENST00000613758 ADAM8P78325 824 aa12.14□□□□□ -0.47
TMEM254-213ENST00000613758 RPRMLQ8N4K4 120 aa12.14□□□□□ -0.47
TMEM254-213ENST00000613758 ZFP41Q8N8Y5 198 aa12.14□□□□□ -0.47
TMEM254-213ENST00000613758 C11orf40Q8WZ69 217 aa12.14□□□□□ -0.47
TMEM254-213ENST00000613758 ALKBH3Q96Q83 286 aaPredicted RBP12.14□□□□□ -0.47
TMEM254-213ENST00000613758 GPR35Q9HC97 309 aa12.14□□□□□ -0.47
TMEM254-213ENST00000613758 TOXO94900 526 aa12.13□□□□□ -0.47
TMEM254-213ENST00000613758 HRGP04196 525 aa12.13□□□□□ -0.47
TMEM254-213ENST00000613758 GUCA1AP43080 201 aaPredicted RBP12.13□□□□□ -0.47
TMEM254-213ENST00000613758 KIR2DL2P43627 348 aaPredicted RBP12.13□□□□□ -0.47
TMEM254-213ENST00000613758 OR3A2P47893 321 aa12.13□□□□□ -0.47
TMEM254-213ENST00000613758 ENTPD1P49961 510 aa12.13□□□□□ -0.47
TMEM254-213ENST00000613758 ROR2Q01974 943 aaKnown RBP12.13□□□□□ -0.47
TMEM254-213ENST00000613758 FOXF2Q12947 444 aa12.13□□□□□ -0.47
TMEM254-213ENST00000613758 TIMM50Q3ZCQ8 353 aa12.13□□□□□ -0.47
TMEM254-213ENST00000613758 DPY19L4Q7Z388 723 aa12.13□□□□□ -0.47
TMEM254-213ENST00000613758 CDC20BQ86Y33 519 aa12.13□□□□□ -0.47
TMEM254-213ENST00000613758 KLBQ86Z14 1044 aa12.13□□□□□ -0.47
TMEM254-213ENST00000613758 UBE2J2Q8N2K1 259 aa12.13□□□□□ -0.47
TMEM254-213ENST00000613758 CNEP1R1Q8N9A8 125 aa12.13□□□□□ -0.47
TMEM254-213ENST00000613758 UPB1Q9UBR1 384 aa12.13□□□□□ -0.47
TMEM254-213ENST00000613758 STUB1Q9UNE7 303 aa12.13□□□□□ -0.47
TMEM254-213ENST00000613758 COPS3Q9UNS2 423 aa12.13□□□□□ -0.47
TMEM254-213ENST00000613758 MED12LQ86YW9 2145 aa12.13□□□□□ -0.47
TMEM254-213ENST00000613758 PNMA8CA0A1B0GUJ8 204 aa12.13□□□□□ -0.47
TMEM254-213ENST00000613758 ZNF670-ZNF695F2Z2N8 137 aa12.13□□□□□ -0.47
TMEM254-213ENST00000613758 IL2RAP01589 272 aa12.13□□□□□ -0.47
TMEM254-213ENST00000613758 TIMP3P35625 211 aa12.13□□□□□ -0.47
TMEM254-213ENST00000613758 RPS27P42677 84 aaKnown RBP12.13□□□□□ -0.47
TMEM254-213ENST00000613758 RPS25P62851 125 aaKnown RBP12.13□□□□□ -0.47
TMEM254-213ENST00000613758 SGCAQ16586 387 aa12.13□□□□□ -0.47
TMEM254-213ENST00000613758 CEACAM16Q2WEN9 425 aa12.13□□□□□ -0.47
TMEM254-213ENST00000613758 TMPRSS11AQ6ZMR5 421 aa12.13□□□□□ -0.47
TMEM254-213ENST00000613758 GDPGP1Q6ZNW5 385 aa12.13□□□□□ -0.47
TMEM254-213ENST00000613758 FOXL2NBQ6ZUU3 175 aa12.13□□□□□ -0.47
TMEM254-213ENST00000613758 ST6GALNAC3Q8NDV1 305 aa12.13□□□□□ -0.47
TMEM254-213ENST00000613758 OR10H5Q8NGA6 315 aa12.13□□□□□ -0.47
TMEM254-213ENST00000613758 UFD1Q92890 307 aa12.13□□□□□ -0.47
TMEM254-213ENST00000613758 TTYH2Q9BSA4 534 aa12.13□□□□□ -0.47
TMEM254-213ENST00000613758 POLE4Q9NR33 117 aa12.13□□□□□ -0.47
TMEM254-213ENST00000613758 PRSS50Q9UI38 385 aa12.13□□□□□ -0.47
TMEM254-213ENST00000613758 TINAGQ9UJW2 476 aa12.13□□□□□ -0.47
TMEM254-213ENST00000613758 SIRT4Q9Y6E7 314 aaPredicted RBP12.13□□□□□ -0.47
TMEM254-213ENST00000613758 ZNF587BE7ETH6 402 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 CLPXO76031 633 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 SPARCP09486 303 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 TMIGD3P0DMS9 266 aaPredicted RBP12.12□□□□□ -0.47
TMEM254-213ENST00000613758 GLI4P10075 376 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 PSMA1P25786 263 aaKnown RBP12.12□□□□□ -0.47
TMEM254-213ENST00000613758 KCNMB1Q16558 191 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 TEX30Q5JUR7 227 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 USP43Q70EL4 1123 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 OR6K3Q8NGY3 331 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 HTRA1Q92743 480 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 MNTQ99583 582 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 CDADC1Q9BWV3 514 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 SLIRPQ9GZT3 109 aaKnown RBP12.12□□□□□ -0.47
TMEM254-213ENST00000613758 EMC7Q9NPA0 242 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 BABAM2Q9NXR7 383 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 LAMP5Q9UJQ1 280 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 TMEM14AQ9Y6G1 99 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 PRRC2CQ9Y520 2896 aaKnown RBP12.12□□□□□ -0.47
TMEM254-213ENST00000613758 ATRXP46100 2492 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 RPL36A-HNRNPH2H7BZ11 118 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 CRHP06850 196 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 INHBBP09529 407 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 PSKH1P11801 424 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 ALOX5APP20292 161 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 MSR1P21757 451 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 OR12D2P58182 307 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 BDH1Q02338 343 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 FAPQ12884 760 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 FBXW9Q5XUX1 488 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 OTOSQ8NHW6 89 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 THEM6Q8WUY1 208 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 ZFP3Q96NJ6 502 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 DACH2Q96NX9 599 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 KCNG2Q9UJ96 466 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 SH3BGRL2Q9UJC5 107 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 KLHDC2Q9Y2U9 406 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 SPTA1P02549 2419 aa12.12□□□□□ -0.47
TMEM254-213ENST00000613758 E9PI62 339 aa12.11□□□□□ -0.47
TMEM254-213ENST00000613758 TMCC2O75069 709 aa12.11□□□□□ -0.47
TMEM254-213ENST00000613758 TNFSF13O75888 250 aa12.11□□□□□ -0.47
TMEM254-213ENST00000613758 CEACAM8P31997 349 aaPredicted RBP12.11□□□□□ -0.47
TMEM254-213ENST00000613758 SERPINB10P48595 397 aa12.11□□□□□ -0.47
TMEM254-213ENST00000613758 TUBA1BP68363 451 aa12.11□□□□□ -0.47
TMEM254-213ENST00000613758 MRPS34P82930 218 aaKnown RBP12.11□□□□□ -0.47
TMEM254-213ENST00000613758 PCK2Q16822 640 aa12.11□□□□□ -0.47
TMEM254-213ENST00000613758 DGUOKQ16854 277 aa12.11□□□□□ -0.47
TMEM254-213ENST00000613758 EIF2S3LQ2VIR3 472 aaKnown RBP12.11□□□□□ -0.47
TMEM254-213ENST00000613758 VWA1Q6PCB0 445 aa12.11□□□□□ -0.47
TMEM254-213ENST00000613758 CD200R1LQ6Q8B3 271 aa12.11□□□□□ -0.47
TMEM254-213ENST00000613758 TFAP2EQ6VUC0 442 aa12.11□□□□□ -0.47
TMEM254-213ENST00000613758 TUBA1AQ71U36 451 aa12.11□□□□□ -0.47
TMEM254-213ENST00000613758 TMEM203Q969S6 136 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms