RNA–Protein interactions for RNA: ENST00000611008.4

TARDBP-212, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-212ENST00000611008 USP27XA6NNY8 438 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 TRIM49D1C9J1S8 452 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 PGRMC1O00264 195 aaKnown RBP2.39□□□□□ -2.03
TARDBP-212ENST00000611008 RGS16O15492 202 aaPredicted RBP2.39□□□□□ -2.03
TARDBP-212ENST00000611008 ZNF208O43345 1280 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 COCHO43405 550 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 ATP8B1O43520 1251 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 RNF13O43567 381 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 CDH16O75309 829 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 CIAO1O76071 339 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 IGHV3-48P01763 117 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 TRBC1P01850 177 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 APOEP02649 317 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 P04436 131 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 KRT7P08729 469 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 SNRPAP09012 282 aaKnown RBP2.39□□□□□ -2.03
TARDBP-212ENST00000611008 CCL2P13500 99 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 MSR1P21757 451 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 COX7A1P24310 79 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 GCAP28676 217 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 CD40LGP29965 261 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 HTR1FP30939 366 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 HOXA9P31269 272 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 CRATP43155 626 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 CCT3P49368 545 aaKnown RBP2.39□□□□□ -2.03
TARDBP-212ENST00000611008 CDC34P49427 236 aaPredicted RBP2.39□□□□□ -2.03
TARDBP-212ENST00000611008 ZNF133P52736 654 aaPredicted RBP2.39□□□□□ -2.03
TARDBP-212ENST00000611008 CDH6P55285 790 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 SELENOTP62341 195 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 RPS15P62841 145 aaKnown RBP2.39□□□□□ -2.03
TARDBP-212ENST00000611008 GNB2P62879 340 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 GLO1Q04760 184 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 CDC20Q12834 499 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 PSG7Q13046 419 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 DGCR6Q14129 220 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 SPCS2Q15005 226 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 NSDHLQ15738 373 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 USF2Q15853 346 aaPredicted RBP2.39□□□□□ -2.03
TARDBP-212ENST00000611008 IL17AQ16552 155 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 ALKBH6Q3KRA9 238 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 SLC25A52Q3SY17 297 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 XKR4Q5GH76 650 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 MLIPQ5VWP3 458 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 TMEM225Q6GV28 225 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 CCDC121Q6ZUS5 278 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 COPS6Q7L5N1 327 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 BHLHA15Q7RTS1 189 aaPredicted RBP2.39□□□□□ -2.03
TARDBP-212ENST00000611008 ZNF571Q7Z3V5 609 aaPredicted RBP2.39□□□□□ -2.03
TARDBP-212ENST00000611008 SLC51BQ86UW2 128 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 ECHDC2Q86YB7 292 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 LRRC8AQ8IWT6 810 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 SVOPLQ8N434 492 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 RNF175Q8N4F7 328 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 TBC1D19Q8N5T2 526 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 FAM86B1Q8N7N1 296 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 SYT14Q8NB59 555 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 OR4D9Q8NGE8 314 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 OR1F12Q8NHA8 337 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 FAM151AQ8WW52 585 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 ING5Q8WYH8 240 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 FAM3CQ92520 227 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 FGF11Q92914 225 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 ELSPBP1Q96BH3 223 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 PRRC1Q96M27 445 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 CHP1Q99653 195 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 ARHGDIGQ99819 225 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 KLHDC3Q9BQ90 382 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 SLC35A5Q9BS91 424 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 TUBGCP2Q9BSJ2 902 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 PARD6GQ9BYG4 376 aaPredicted RBP2.39□□□□□ -2.03
TARDBP-212ENST00000611008 DRC3Q9H069 523 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 DNTTIP1Q9H147 329 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 ZDHHC11Q9H8X9 412 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 PARVBQ9HBI1 364 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 PLGRKTQ9HBL7 147 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 POPDC2Q9HBU9 364 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 SH2D2AQ9NP31 389 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 AIG1Q9NVV5 245 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 RHBDL2Q9NX52 303 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 GCNT4Q9P109 453 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 ZNF229Q9UJW7 825 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 COPS3Q9UNS2 423 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 AK6Q9Y3D8 172 aaKnown RBP2.39□□□□□ -2.03
TARDBP-212ENST00000611008 RHBDD3Q9Y3P4 386 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 SAMHD1Q9Y3Z3 626 aaKnown RBP2.39□□□□□ -2.03
TARDBP-212ENST00000611008 PUS1Q9Y606 427 aaKnown RBP eCLIP2.39□□□□□ -2.03
TARDBP-212ENST00000611008 CACNG2Q9Y698 323 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 FLNBO75369 2602 aaKnown RBP2.39□□□□□ -2.03
TARDBP-212ENST00000611008 TNS3Q68CZ2 1445 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 SPATA31E1Q6ZUB1 1445 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 PKD1L3Q7Z443 1732 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 NRXN1Q9ULB1 1477 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 NAV2Q8IVL1 2488 aa2.39□□□□□ -2.03
TARDBP-212ENST00000611008 TDRD6O60522 2096 aaKnown RBP2.38□□□□□ -2.03
TARDBP-212ENST00000611008 KCPQ6ZWJ8 1503 aa2.38□□□□□ -2.03
TARDBP-212ENST00000611008 SPTBN4Q9H254 2564 aa2.38□□□□□ -2.03
TARDBP-212ENST00000611008 CHD6Q8TD26 2715 aa2.38□□□□□ -2.03
TARDBP-212ENST00000611008 TRAV25A0A0B4J276 109 aa2.38□□□□□ -2.03
TARDBP-212ENST00000611008 A0A1W2PPV4 95 aa2.38□□□□□ -2.03
TARDBP-212ENST00000611008 A8MXQ7 604 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms