RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 CD37P11049 281 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 ZNF17P17021 662 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 LAP3P28838 519 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 MLF1P58340 268 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 CLRN1P58418 232 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 SNTB2Q13425 540 aaKnown RBP10.67□□□□□ -0.7
USP6NL-206ENST00000609853 KLF9Q13886 244 aaPredicted RBP10.67□□□□□ -0.7
USP6NL-206ENST00000609853 TMEM69Q5SWH9 247 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 GLT8D1Q68CQ7 371 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 TMEM225Q6GV28 225 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 TMPPEQ6ZT21 453 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 LINGO2Q7L985 606 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 DCXRQ7Z4W1 244 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.67□□□□□ -0.7
USP6NL-206ENST00000609853 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.67□□□□□ -0.7
USP6NL-206ENST00000609853 SIAH3Q8IW03 269 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 TMEM156Q8N614 296 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 NOXO1Q8NFA2 376 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 RHBDD1Q8TEB9 315 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 ATOH1Q92858 354 aaPredicted RBP10.67□□□□□ -0.7
USP6NL-206ENST00000609853 FOXN4Q96NZ1 517 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 NIPAL2Q9H841 368 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 DDX28Q9NUL7 540 aaKnown RBP10.67□□□□□ -0.7
USP6NL-206ENST00000609853 ING3Q9NXR8 418 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 NUFIP1Q9UHK0 495 aaKnown RBP10.67□□□□□ -0.7
USP6NL-206ENST00000609853 RBMX2Q9Y388 322 aaKnown RBP10.67□□□□□ -0.7
USP6NL-206ENST00000609853 A0A087WV48 116 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 SHISA8B8ZZ34 492 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 ACOT7O00154 380 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 SULT2B1O00204 365 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 SLC17A2O00624 439 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 XRCC3O43542 346 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 TRAF3IP2O43734 574 aaPredicted RBP10.67□□□□□ -0.7
USP6NL-206ENST00000609853 KRT33AO76009 404 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 MAS1P04201 325 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 H2BFMP0C1H6 154 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 PGA4P0DJD7 388 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 PGA3P0DJD8 388 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 ZNF43P17038 809 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 BTCP35070 178 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 GDNFP39905 211 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 RRAS2P62070 204 aaPredicted RBP10.67□□□□□ -0.7
USP6NL-206ENST00000609853 FMODQ06828 376 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 CHAF1BQ13112 559 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 TMEM176BQ3YBM2 270 aaPredicted RBP10.67□□□□□ -0.7
USP6NL-206ENST00000609853 LIX1LQ8IVB5 337 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 DTX3Q8N9I9 347 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 OR51A4Q8NGJ6 313 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 OR10AC1Q8NH08 325 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 ASB5Q8WWX0 329 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 AKAP1Q92667 903 aaKnown RBP eCLIP10.67□□□□□ -0.7
USP6NL-206ENST00000609853 MS4A3Q96HJ5 214 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 TMEM41AQ96HV5 264 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 CACNG6Q9BXT2 260 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 C1orf198Q9H425 327 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 CDCP1Q9H5V8 836 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 HPF1Q9NWY4 346 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 EMC3Q9P0I2 261 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 CYB5R1Q9UHQ9 305 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 POU2F3Q9UKI9 436 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 OR52A1Q9UKL2 312 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 GTF2A1LQ9UNN4 478 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 SLC22A13Q9Y226 551 aa10.67□□□□□ -0.7
USP6NL-206ENST00000609853 COL27A1Q8IZC6 1860 aaPredicted RBP10.67□□□□□ -0.7
USP6NL-206ENST00000609853 EML6Q6ZMW3 1958 aa10.66□□□□□ -0.7
USP6NL-206ENST00000609853 TMEM269A0A1B0GVZ9 245 aa10.66□□□□□ -0.7
USP6NL-206ENST00000609853 C7orf66A4D0T2 115 aa10.66□□□□□ -0.7
USP6NL-206ENST00000609853 GJE1A6NN92 205 aa10.66□□□□□ -0.7
USP6NL-206ENST00000609853 ZNF726A6NNF4 738 aa10.66□□□□□ -0.7
USP6NL-206ENST00000609853 CBR3O75828 277 aa10.66□□□□□ -0.7
USP6NL-206ENST00000609853 STK17BO94768 372 aa10.66□□□□□ -0.7
USP6NL-206ENST00000609853 MPZL1O95297 269 aa10.66□□□□□ -0.7
USP6NL-206ENST00000609853 TCRBP04435 133 aa10.66□□□□□ -0.7
USP6NL-206ENST00000609853 YES1P07947 543 aa10.66□□□□□ -0.7
USP6NL-206ENST00000609853 SP9P0CG40 484 aa10.66□□□□□ -0.7
USP6NL-206ENST00000609853 LIFP15018 202 aa10.66□□□□□ -0.7
USP6NL-206ENST00000609853 CSRP1P21291 193 aaKnown RBP10.66□□□□□ -0.7
USP6NL-206ENST00000609853 PTH2RP49190 550 aa10.66□□□□□ -0.7
USP6NL-206ENST00000609853 AGFG1P52594 562 aaKnown RBP10.66□□□□□ -0.7
USP6NL-206ENST00000609853 MFGE8Q08431 387 aaPredicted RBP10.66□□□□□ -0.7
USP6NL-206ENST00000609853 RAB11BQ15907 218 aa10.66□□□□□ -0.7
USP6NL-206ENST00000609853 KCNMB1Q16558 191 aa10.66□□□□□ -0.7
USP6NL-206ENST00000609853 PRAMEF20Q5VT98 475 aa10.66□□□□□ -0.7
USP6NL-206ENST00000609853 ANKRD16Q6P6B7 361 aa10.66□□□□□ -0.7
USP6NL-206ENST00000609853 KLHL24Q6TFL4 600 aa10.66□□□□□ -0.7
USP6NL-206ENST00000609853 C6orf15Q6UXA7 325 aaPredicted RBP10.66□□□□□ -0.7
USP6NL-206ENST00000609853 DNM1P46Q6ZS02 220 aa10.66□□□□□ -0.7
USP6NL-206ENST00000609853 ESPNLQ6ZVH7 1005 aa10.66□□□□□ -0.7
USP6NL-206ENST00000609853 OR1J4Q8NGS1 313 aa10.66□□□□□ -0.7
USP6NL-206ENST00000609853 C11orf40Q8WZ69 217 aa10.66□□□□□ -0.7
USP6NL-206ENST00000609853 FOXRED1Q96CU9 486 aaPredicted RBP10.66□□□□□ -0.7
USP6NL-206ENST00000609853 TAAR9Q96RI9 348 aa10.66□□□□□ -0.7
USP6NL-206ENST00000609853 DDA1Q9BW61 102 aa10.66□□□□□ -0.7
USP6NL-206ENST00000609853 MOB1AQ9H8S9 216 aa10.66□□□□□ -0.7
USP6NL-206ENST00000609853 G6PC2Q9NQR9 355 aa10.66□□□□□ -0.7
USP6NL-206ENST00000609853 DIABLOQ9NR28 239 aa10.66□□□□□ -0.7
USP6NL-206ENST00000609853 EMC9Q9Y3B6 208 aa10.66□□□□□ -0.7
USP6NL-206ENST00000609853 LOXL2Q9Y4K0 774 aa10.66□□□□□ -0.7
USP6NL-206ENST00000609853 LOC100289279A0A1B0GTE1 492 aa10.65□□□□□ -0.7
USP6NL-206ENST00000609853 DNPH1O43598 174 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 164.2 ms