RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-222ENST00000609232 HES7Q9BYE0 225 aa8.86□□□□□ -0.99
CTCFL-222ENST00000609232 TMEM138Q9NPI0 162 aa8.86□□□□□ -0.99
CTCFL-222ENST00000609232 SEMA5BQ9P283 1151 aa8.86□□□□□ -0.99
CTCFL-222ENST00000609232 FBXL2Q9UKC9 423 aa8.86□□□□□ -0.99
CTCFL-222ENST00000609232 A0A096LPE4 126 aa8.86□□□□□ -0.99
CTCFL-222ENST00000609232 A0A1W2PPZ6 126 aa8.86□□□□□ -0.99
CTCFL-222ENST00000609232 ZNF98A6NK75 572 aa8.86□□□□□ -0.99
CTCFL-222ENST00000609232 ZNF593O00488 134 aaPredicted RBP8.86□□□□□ -0.99
CTCFL-222ENST00000609232 CHP2O43745 196 aa8.86□□□□□ -0.99
CTCFL-222ENST00000609232 KHDRBS3O75525 346 aaKnown RBP8.86□□□□□ -0.99
CTCFL-222ENST00000609232 IL1AP01583 271 aa8.86□□□□□ -0.99
CTCFL-222ENST00000609232 RAF1P04049 648 aa8.86□□□□□ -0.99
CTCFL-222ENST00000609232 ANKRD34CP0C6C1 535 aa8.86□□□□□ -0.99
CTCFL-222ENST00000609232 PPP3R1P63098 170 aa8.86□□□□□ -0.99
CTCFL-222ENST00000609232 TEKQ02763 1124 aa8.86□□□□□ -0.99
CTCFL-222ENST00000609232 HSF2Q03933 536 aa8.86□□□□□ -0.99
CTCFL-222ENST00000609232 BRICD5Q6PL45 260 aa8.86□□□□□ -0.99
CTCFL-222ENST00000609232 COX15Q7KZN9 410 aa8.86□□□□□ -0.99
CTCFL-222ENST00000609232 PRSS27Q9BQR3 290 aa8.86□□□□□ -0.99
CTCFL-222ENST00000609232 C19orf25Q9UFG5 118 aaPredicted RBP8.86□□□□□ -0.99
CTCFL-222ENST00000609232 ICAM5Q9UMF0 924 aa8.86□□□□□ -0.99
CTCFL-222ENST00000609232 FRG2CA6NGY1 282 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 ZNF41P51814 821 aaPredicted RBP8.85□□□□□ -0.99
CTCFL-222ENST00000609232 BIDP55957 195 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 CLDN20P56880 219 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 DCAF7P61962 342 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 ZNF141Q15928 474 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 MZT2AQ6P582 158 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 ZNF322Q6U7Q0 402 aaPredicted RBP8.85□□□□□ -0.99
CTCFL-222ENST00000609232 ANKRD37Q7Z713 158 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 LINC00518Q8N0U6 118 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 MAFIPQ8WZ33 124 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 ROBO4Q8WZ75 1007 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 UBL7Q96S82 380 aaPredicted RBP8.85□□□□□ -0.99
CTCFL-222ENST00000609232 COPS3Q9UNS2 423 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 MAB21L2Q9Y586 359 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 PCDHGA9Q9Y5G4 932 aaKnown RBP8.85□□□□□ -0.99
CTCFL-222ENST00000609232 USP9XQ93008 2570 aaPredicted RBP8.85□□□□□ -0.99
CTCFL-222ENST00000609232 A0A0B4J2E0 115 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 A0A1B0GX12 115 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 SHISA3A0PJX4 238 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 LINC00587B1AMM8 73 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 TOR1AO14656 332 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 ITGA10O75578 1167 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 MT-ND4P03905 459 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 IGKV3-11P04433 115 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 S100A6P06703 90 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 DNASE1P24855 282 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 NUP62P37198 522 aaPredicted RBP8.85□□□□□ -0.99
CTCFL-222ENST00000609232 ACAA2P42765 397 aaKnown RBP8.85□□□□□ -0.99
CTCFL-222ENST00000609232 CCR6P51684 374 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 GPR143P51810 404 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 ARHGDIBP52566 201 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 RNF4P78317 190 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 SRSF6Q13247 344 aaKnown RBP8.85□□□□□ -0.99
CTCFL-222ENST00000609232 EXOSC2Q13868 293 aaKnown RBP8.85□□□□□ -0.99
CTCFL-222ENST00000609232 ACKR1Q16570 336 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 C12orf73Q69YU5 71 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 FCRLAQ7L513 359 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 SLITRK4Q8IW52 837 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 PLPP5Q8NEB5 264 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 ST8SIA4Q92187 359 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 ABCG5Q9H222 651 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 LIN7BQ9HAP6 207 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 NOX4Q9NPH5 578 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 NUDT15Q9NV35 164 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 EMC9Q9Y3B6 208 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 RAMP1O60894 148 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 MFSD13AQ14CX5 517 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 PPA1Q15181 289 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 NUP54Q7Z3B4 507 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 RNF113BQ8IZP6 322 aaKnown RBP8.85□□□□□ -0.99
CTCFL-222ENST00000609232 BOLLQ8N9W6 283 aaKnown RBP8.85□□□□□ -0.99
CTCFL-222ENST00000609232 RBPMSQ93062 196 aaKnown RBP8.85□□□□□ -0.99
CTCFL-222ENST00000609232 AMELYQ99218 206 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 C12orf49Q9H741 205 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 ELOVL3Q9HB03 270 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 TRIM36Q9NQ86 728 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 KLHL9Q9P2J3 617 aa8.85□□□□□ -0.99
CTCFL-222ENST00000609232 PLEKHB1Q9UF11 243 aaPredicted RBP8.85□□□□□ -0.99
CTCFL-222ENST00000609232 TMED7-TICAM2A0A0A6YYA0 188 aa8.84□□□□□ -0.99
CTCFL-222ENST00000609232 SURF4O15260 269 aa8.84□□□□□ -0.99
CTCFL-222ENST00000609232 FLRT2O43155 660 aa8.84□□□□□ -0.99
CTCFL-222ENST00000609232 MT-ND5P03915 603 aa8.84□□□□□ -0.99
CTCFL-222ENST00000609232 HRGP04196 525 aa8.84□□□□□ -0.99
CTCFL-222ENST00000609232 IFI6P09912 130 aa8.84□□□□□ -0.99
CTCFL-222ENST00000609232 SNRPGP62308 76 aaKnown RBP8.84□□□□□ -0.99
CTCFL-222ENST00000609232 CDK5Q00535 292 aa8.84□□□□□ -0.99
CTCFL-222ENST00000609232 RELQ04864 619 aaPredicted RBP8.84□□□□□ -0.99
CTCFL-222ENST00000609232 IL11RAQ14626 422 aa8.84□□□□□ -0.99
CTCFL-222ENST00000609232 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.84□□□□□ -0.99
CTCFL-222ENST00000609232 EXOSC6Q5RKV6 272 aaKnown RBP8.84□□□□□ -0.99
CTCFL-222ENST00000609232 LIPNQ5VXI9 398 aa8.84□□□□□ -0.99
CTCFL-222ENST00000609232 MEDAGQ5VYS4 303 aa8.84□□□□□ -0.99
CTCFL-222ENST00000609232 MEPCEQ7L2J0 689 aaKnown RBP8.84□□□□□ -0.99
CTCFL-222ENST00000609232 CPEB2Q7Z5Q1 589 aaKnown RBP8.84□□□□□ -0.99
CTCFL-222ENST00000609232 ZNF440Q8IYI8 595 aa8.84□□□□□ -0.99
CTCFL-222ENST00000609232 OR10K1Q8NGX5 313 aa8.84□□□□□ -0.99
CTCFL-222ENST00000609232 TMEM106AQ96A25 262 aa8.84□□□□□ -0.99
CTCFL-222ENST00000609232 TMED7Q9Y3B3 224 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms