RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 ZNF35P13682 527 aa12.04□□□□□ -0.48
RNF40-212ENST00000602784 ZNF32P17041 273 aa12.04□□□□□ -0.48
RNF40-212ENST00000602784 SPI1P17947 270 aa12.04□□□□□ -0.48
RNF40-212ENST00000602784 EFNB1P98172 346 aa12.04□□□□□ -0.48
RNF40-212ENST00000602784 PSG4Q00888 419 aa12.04□□□□□ -0.48
RNF40-212ENST00000602784 SCRN3Q0VDG4 424 aa12.04□□□□□ -0.48
RNF40-212ENST00000602784 RAB39AQ14964 217 aa12.04□□□□□ -0.48
RNF40-212ENST00000602784 SNAPC1Q16533 368 aa12.04□□□□□ -0.48
RNF40-212ENST00000602784 PABPC1L2AQ5JQF8 200 aa12.04□□□□□ -0.48
RNF40-212ENST00000602784 C12orf73Q69YU5 71 aa12.04□□□□□ -0.48
RNF40-212ENST00000602784 UGT2A3Q6UWM9 527 aa12.04□□□□□ -0.48
RNF40-212ENST00000602784 C20orf204Q6ZNR8 217 aa12.04□□□□□ -0.48
RNF40-212ENST00000602784 MYPOPQ86VE0 399 aaPredicted RBP12.04□□□□□ -0.48
RNF40-212ENST00000602784 ZNF584Q8IVC4 421 aa12.04□□□□□ -0.48
RNF40-212ENST00000602784 ZNF611Q8N823 705 aa12.04□□□□□ -0.48
RNF40-212ENST00000602784 KBTBD8Q8NFY9 601 aa12.04□□□□□ -0.48
RNF40-212ENST00000602784 OR9Q1Q8NGQ5 310 aa12.04□□□□□ -0.48
RNF40-212ENST00000602784 OR1J2Q8NGS2 313 aa12.04□□□□□ -0.48
RNF40-212ENST00000602784 AKAP1Q92667 903 aaKnown RBP eCLIP12.04□□□□□ -0.482e-6■■■■□ 20.7
RNF40-212ENST00000602784 MS4A3Q96HJ5 214 aa12.04□□□□□ -0.48
RNF40-212ENST00000602784 OR2H1Q9GZK4 316 aa12.04□□□□□ -0.48
RNF40-212ENST00000602784 C8orf4Q9NR00 106 aa12.04□□□□□ -0.48
RNF40-212ENST00000602784 PDZD2O15018 2839 aa12.03□□□□□ -0.48
RNF40-212ENST00000602784 PRODHO43272 600 aa12.03□□□□□ -0.48
RNF40-212ENST00000602784 SNAP29O95721 258 aa12.03□□□□□ -0.48
RNF40-212ENST00000602784 COX5BP10606 129 aa12.03□□□□□ -0.48
RNF40-212ENST00000602784 FMO3P31513 532 aa12.03□□□□□ -0.48
RNF40-212ENST00000602784 PYCR1P32322 319 aa12.03□□□□□ -0.48
RNF40-212ENST00000602784 CDH11P55287 796 aa12.03□□□□□ -0.48
RNF40-212ENST00000602784 HIST1H3AP68431 136 aa12.03□□□□□ -0.48
RNF40-212ENST00000602784 TEKQ02763 1124 aa12.03□□□□□ -0.48
RNF40-212ENST00000602784 SPOCK1Q08629 439 aa12.03□□□□□ -0.48
RNF40-212ENST00000602784 HIST2H3PS2Q5TEC6 136 aa12.03□□□□□ -0.48
RNF40-212ENST00000602784 HIST2H3AQ71DI3 136 aa12.03□□□□□ -0.48
RNF40-212ENST00000602784 CPOQ8IVL8 374 aa12.03□□□□□ -0.48
RNF40-212ENST00000602784 SLC30A7Q8NEW0 376 aa12.03□□□□□ -0.48
RNF40-212ENST00000602784 NUP37Q8NFH4 326 aa12.03□□□□□ -0.48
RNF40-212ENST00000602784 OR10H5Q8NGA6 315 aa12.03□□□□□ -0.48
RNF40-212ENST00000602784 FBXW5Q969U6 566 aa12.03□□□□□ -0.48
RNF40-212ENST00000602784 FOXN4Q96NZ1 517 aa12.03□□□□□ -0.48
RNF40-212ENST00000602784 SLC29A1Q99808 456 aa12.03□□□□□ -0.48
RNF40-212ENST00000602784 GRIP2Q9C0E4 1043 aa12.03□□□□□ -0.48
RNF40-212ENST00000602784 WNT5BQ9H1J7 359 aa12.03□□□□□ -0.48
RNF40-212ENST00000602784 TVP23BQ9NYZ1 205 aa12.03□□□□□ -0.48
RNF40-212ENST00000602784 CISD1Q9NZ45 108 aaKnown RBP12.03□□□□□ -0.48
RNF40-212ENST00000602784 ASH2LQ9UBL3 628 aa12.03□□□□□ -0.48
RNF40-212ENST00000602784 RAI1Q7Z5J4 1906 aaPredicted RBP12.02□□□□□ -0.49
RNF40-212ENST00000602784 FAM183AA6NL82 134 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 FAM171A2A8MVW0 826 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 E9PQ18 207 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 ATP6V1G2-DDX39BF2Z307 99 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 TMCC2O75069 709 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 GLCEO94923 617 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 GPANK1O95872 356 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 HLA-DQA2P01906 255 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 GYPBP06028 91 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 ZNF823P16415 610 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 NR4A1P22736 598 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 STOMP27105 288 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 CALCRP30988 508 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 GGT2P36268 569 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 POLR2IP36954 125 aaKnown RBP12.02□□□□□ -0.49
RNF40-212ENST00000602784 HGFACQ04756 655 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 PCK2Q16822 640 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 TBC1D28Q2M2D7 210 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 TEX30Q5JUR7 227 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 SLC35D3Q5M8T2 416 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 LINC01590Q5TEZ4 76 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 ZNF544Q6NX49 715 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 PLBD1Q6P4A8 553 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 PAMR1Q6UXH9 720 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 CPEB3Q8NE35 698 aaKnown RBP12.02□□□□□ -0.49
RNF40-212ENST00000602784 GJC3Q8NFK1 279 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 ZNRF4Q8WWF5 429 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 NINJ1Q92982 152 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 HRASLS5Q96KN8 279 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 RDH12Q96NR8 316 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 DHRS9Q9BPW9 319 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 CDADC1Q9BWV3 514 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 HCAR1Q9BXC0 346 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 RIBC2Q9H4K1 309 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 MARCH7Q9H992 704 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 UBTD1Q9HAC8 227 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 HINT3Q9NQE9 182 aaKnown RBP12.02□□□□□ -0.49
RNF40-212ENST00000602784 MRPL22Q9NWU5 206 aaKnown RBP12.02□□□□□ -0.49
RNF40-212ENST00000602784 CYB5R1Q9UHQ9 305 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 ATPIF1Q9UII2 106 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 ST6GALNAC2Q9UJ37 374 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 POU2F3Q9UKI9 436 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 SPEF1Q9Y4P9 236 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 LHFPL6Q9Y693 200 aa12.02□□□□□ -0.49
RNF40-212ENST00000602784 TEX15Q9BXT5 2789 aa12.01□□□□□ -0.49
RNF40-212ENST00000602784 E7EQL1 145 aa12.01□□□□□ -0.49
RNF40-212ENST00000602784 SGCEO43556 437 aa12.01□□□□□ -0.49
RNF40-212ENST00000602784 PRKYO43930 277 aa12.01□□□□□ -0.49
RNF40-212ENST00000602784 RAF1P04049 648 aa12.01□□□□□ -0.49
RNF40-212ENST00000602784 CLUP10909 449 aa12.01□□□□□ -0.49
RNF40-212ENST00000602784 APEX1P27695 318 aaKnown RBP12.01□□□□□ -0.49
RNF40-212ENST00000602784 PCSK6P29122 969 aa12.01□□□□□ -0.49
RNF40-212ENST00000602784 APLNRP35414 380 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms