RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 POLE4Q9NR33 117 aa12.18□□□□□ -0.46
LIG1-218ENST00000599322 YAE1D1Q9NRH1 226 aa12.18□□□□□ -0.46
LIG1-218ENST00000599322 CR1P17927 2039 aa12.18□□□□□ -0.46
LIG1-218ENST00000599322 RTTNQ86VV8 2226 aa12.18□□□□□ -0.46
LIG1-218ENST00000599322 CHD3Q12873 2000 aaKnown RBP12.17□□□□□ -0.46
LIG1-218ENST00000599322 PLSCR5A0PG75 271 aa12.17□□□□□ -0.46
LIG1-218ENST00000599322 GYG2O15488 501 aa12.17□□□□□ -0.46
LIG1-218ENST00000599322 IDH3BO43837 385 aa12.17□□□□□ -0.46
LIG1-218ENST00000599322 LY6HO94772 140 aa12.17□□□□□ -0.46
LIG1-218ENST00000599322 CCNB2O95067 398 aa12.17□□□□□ -0.46
LIG1-218ENST00000599322 SEMG1P04279 462 aa12.17□□□□□ -0.46
LIG1-218ENST00000599322 GZMKP49863 264 aa12.17□□□□□ -0.46
LIG1-218ENST00000599322 PSG4Q00888 419 aa12.17□□□□□ -0.46
LIG1-218ENST00000599322 TSPAN31Q12999 210 aa12.17□□□□□ -0.46
LIG1-218ENST00000599322 GGTLC2Q14390 218 aa12.17□□□□□ -0.46
LIG1-218ENST00000599322 MESTQ5EB52 335 aa12.17□□□□□ -0.46
LIG1-218ENST00000599322 LCN8Q6JVE9 175 aa12.17□□□□□ -0.46
LIG1-218ENST00000599322 ZER1Q7Z7L7 766 aa12.17□□□□□ -0.46
LIG1-218ENST00000599322 CLDN22Q8N7P3 220 aa12.17□□□□□ -0.46
LIG1-218ENST00000599322 AKR7LQ8NHP1 331 aa12.17□□□□□ -0.46
LIG1-218ENST00000599322 RASD2Q96D21 266 aa12.17□□□□□ -0.46
LIG1-218ENST00000599322 ASB9Q96DX5 294 aa12.17□□□□□ -0.46
LIG1-218ENST00000599322 THTPAQ9BU02 230 aa12.17□□□□□ -0.46
LIG1-218ENST00000599322 SYT4Q9H2B2 425 aa12.17□□□□□ -0.46
LIG1-218ENST00000599322 OR52D1Q9H346 318 aa12.17□□□□□ -0.46
LIG1-218ENST00000599322 TAAR3PQ9P1P4 343 aa12.17□□□□□ -0.46
LIG1-218ENST00000599322 IL20RAQ9UHF4 553 aa12.17□□□□□ -0.46
LIG1-218ENST00000599322 FZR1Q9UM11 496 aa12.17□□□□□ -0.46
LIG1-218ENST00000599322 IGKV1D-43A0A0B4J1Z2 117 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 TMEM129A0AVI4 362 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 GNGT2O14610 69 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 ARPC3O15145 178 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 TPD52L2O43399 206 aaKnown RBP12.16□□□□□ -0.46
LIG1-218ENST00000599322 CD5LO43866 347 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 PPP1R3DO95685 299 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 TXNDC12O95881 172 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 COX5BP10606 129 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 TUBG1P23258 451 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 NR4A2P43354 598 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 LSM6P62312 80 aaKnown RBP12.16□□□□□ -0.46
LIG1-218ENST00000599322 TEKQ02763 1124 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 TRAP1Q12931 704 aaKnown RBP12.16□□□□□ -0.46
LIG1-218ENST00000599322 AQP6Q13520 282 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 FHL1Q13642 323 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 PCGF3Q3KNV8 242 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 SLC36A3Q495N2 470 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 CYB5R2Q6BCY4 276 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 C1orf94Q6P1W5 598 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 UGT2A3Q6UWM9 527 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 FOXL2NBQ6ZUU3 175 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 FAM122BQ7Z309 247 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 ZNF786Q8N393 782 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 CPEB3Q8NE35 698 aaKnown RBP12.16□□□□□ -0.46
LIG1-218ENST00000599322 CCDC124Q96CT7 223 aaKnown RBP12.16□□□□□ -0.46
LIG1-218ENST00000599322 SAMD8Q96LT4 415 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 COG8Q96MW5 612 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 FOXN4Q96NZ1 517 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 ZNF416Q9BWM5 594 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 CDADC1Q9BWV3 514 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 TPK1Q9H3S4 243 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 YY1AP1Q9H869 796 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 TUBG2Q9NRH3 451 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 PLEK2Q9NYT0 353 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 TAS2R1Q9NYW7 299 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 VSX1Q9NZR4 365 aaPredicted RBP12.16□□□□□ -0.46
LIG1-218ENST00000599322 COA3Q9Y2R0 106 aaPredicted RBP12.16□□□□□ -0.46
LIG1-218ENST00000599322 JMJD1CQ15652 2540 aa12.16□□□□□ -0.46
LIG1-218ENST00000599322 CSPG4Q6UVK1 2322 aa12.15□□□□□ -0.46
LIG1-218ENST00000599322 HIVEP2P31629 2446 aa12.15□□□□□ -0.46
LIG1-218ENST00000599322 KIAA1324LA8MWY0 1029 aaPredicted RBP12.15□□□□□ -0.46
LIG1-218ENST00000599322 SGCEO43556 437 aa12.15□□□□□ -0.46
LIG1-218ENST00000599322 DOK2O60496 412 aa12.15□□□□□ -0.46
LIG1-218ENST00000599322 ABHD16AO95870 558 aa12.15□□□□□ -0.46
LIG1-218ENST00000599322 RAP2AP10114 183 aa12.15□□□□□ -0.46
LIG1-218ENST00000599322 ZNF250P15622 560 aa12.15□□□□□ -0.46
LIG1-218ENST00000599322 GSTM3P21266 225 aa12.15□□□□□ -0.46
LIG1-218ENST00000599322 ATP6V1B2P21281 511 aa12.15□□□□□ -0.46
LIG1-218ENST00000599322 LIPAP38571 399 aa12.15□□□□□ -0.46
LIG1-218ENST00000599322 ALDH3B1P43353 468 aa12.15□□□□□ -0.46
LIG1-218ENST00000599322 HTR5AP47898 357 aa12.15□□□□□ -0.46
LIG1-218ENST00000599322 RASSF2P50749 326 aa12.15□□□□□ -0.46
LIG1-218ENST00000599322 HMGA2P52926 109 aa12.15□□□□□ -0.46
LIG1-218ENST00000599322 GLO1Q04760 184 aa12.15□□□□□ -0.46
LIG1-218ENST00000599322 GK3PQ14409 553 aa12.15□□□□□ -0.46
LIG1-218ENST00000599322 TMEM249Q2WGJ8 235 aa12.15□□□□□ -0.46
LIG1-218ENST00000599322 ZMAT1Q5H9K5 638 aa12.15□□□□□ -0.46
LIG1-218ENST00000599322 OR2T5Q6IEZ7 315 aa12.15□□□□□ -0.46
LIG1-218ENST00000599322 LEG1Q6P5S2 330 aa12.15□□□□□ -0.46
LIG1-218ENST00000599322 THSD4Q6ZMP0 1018 aa12.15□□□□□ -0.46
LIG1-218ENST00000599322 ZCCHC24Q8N2G6 241 aaKnown RBP12.15□□□□□ -0.46
LIG1-218ENST00000599322 OR2T29Q8NH02 315 aa12.15□□□□□ -0.46
LIG1-218ENST00000599322 ABHD4Q8TB40 342 aa12.15□□□□□ -0.46
LIG1-218ENST00000599322 RDH5Q92781 318 aa12.15□□□□□ -0.46
LIG1-218ENST00000599322 POM121L2Q96KW2 1035 aa12.15□□□□□ -0.46
LIG1-218ENST00000599322 FUZQ9BT04 418 aa12.15□□□□□ -0.46
LIG1-218ENST00000599322 NUAK2Q9H093 628 aa12.15□□□□□ -0.46
LIG1-218ENST00000599322 SRA1Q9HD15 236 aaKnown RBP12.15□□□□□ -0.46
LIG1-218ENST00000599322 EMC7Q9NPA0 242 aa12.15□□□□□ -0.46
LIG1-218ENST00000599322 HINT3Q9NQE9 182 aaKnown RBP12.15□□□□□ -0.46
LIG1-218ENST00000599322 CYSLTR2Q9NS75 346 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms