RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 SEC14L5O43304 696 aa15.17■□□□□ 0.02
SHKBP1-216ENST00000598201 RFPL3SP0C7P2 107 aa15.17■□□□□ 0.02
SHKBP1-216ENST00000598201 ZNF43P17038 809 aa15.17■□□□□ 0.02
SHKBP1-216ENST00000598201 NPR2P20594 1047 aa15.17■□□□□ 0.02
SHKBP1-216ENST00000598201 B3GALT5-AS1P59052 145 aa15.17■□□□□ 0.02
SHKBP1-216ENST00000598201 SCN1BQ07699 218 aa15.17■□□□□ 0.02
SHKBP1-216ENST00000598201 RASGEF1BQ0VAM2 473 aa15.17■□□□□ 0.02
SHKBP1-216ENST00000598201 MFAP5Q13361 173 aa15.17■□□□□ 0.02
SHKBP1-216ENST00000598201 TOMM20Q15388 145 aa15.17■□□□□ 0.02
SHKBP1-216ENST00000598201 KCTD18Q6PI47 426 aaPredicted RBP15.17■□□□□ 0.02
SHKBP1-216ENST00000598201 GLB1L2Q8IW92 636 aa15.17■□□□□ 0.02
SHKBP1-216ENST00000598201 Q8N402 240 aa15.17■□□□□ 0.02
SHKBP1-216ENST00000598201 ZBTB8BQ8NAP8 495 aaPredicted RBP15.17■□□□□ 0.02
SHKBP1-216ENST00000598201 NOXO1Q8NFA2 376 aa15.17■□□□□ 0.02
SHKBP1-216ENST00000598201 OR4M2Q8NGB6 313 aa15.17■□□□□ 0.02
SHKBP1-216ENST00000598201 ADAMTS17Q8TE56 1095 aa15.17■□□□□ 0.02
SHKBP1-216ENST00000598201 C11orf40Q8WZ69 217 aa15.17■□□□□ 0.02
SHKBP1-216ENST00000598201 NEDD4LQ96PU5 975 aa15.17■□□□□ 0.02
SHKBP1-216ENST00000598201 RBP7Q96R05 134 aa15.17■□□□□ 0.02
SHKBP1-216ENST00000598201 COMMD4Q9H0A8 199 aa15.17■□□□□ 0.02
SHKBP1-216ENST00000598201 FBXL3Q9UKT7 428 aa15.17■□□□□ 0.02
SHKBP1-216ENST00000598201 CACNA1AO00555 2505 aa15.17■□□□□ 0.02
SHKBP1-216ENST00000598201 IGHV3-15A0A0B4J1V0 119 aa15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 H0YC42 278 aa15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 ZNF254O75437 659 aa15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 IGHG1P01857 330 aa15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 CYB561P49447 251 aa15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 CLRN1P58418 232 aa15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 RIN1Q13671 783 aa15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 THEM4Q5T1C6 240 aa15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 YRDCQ86U90 279 aaKnown RBP15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 ZNF433Q8N7K0 673 aaPredicted RBP15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 OR6X1Q8NH79 312 aa15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 UCN2Q96RP3 112 aa15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 STMN3Q9NZ72 180 aa15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 KLHL9Q9P2J3 617 aa15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 PAIP2BQ9ULR5 123 aaKnown RBP15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 CLEC4AQ9UMR7 237 aa15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 ASPMQ8IZT6 3477 aa15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 A0A0J9YW62 118 aa15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 LOC102725191A0A1B0GVB3 256 aa15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 PINLYPA6NC86 204 aa15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 BOLA2-SMG1P6H3BVE0 249 aa15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 APOA1P02647 267 aa15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 HRGP04196 525 aa15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 HNRNPCP07910 306 aaKnown RBP eCLIP15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 ZNF17P17021 662 aa15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 PTBP1P26599 531 aaKnown RBP eCLIP15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 RIDAP52758 137 aaKnown RBP15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 OC90Q02509 493 aaPredicted RBP15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 STAC2Q6ZMT1 411 aa15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 CELF2-AS1Q8N7Q2 184 aa15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 IL17RDQ8NFM7 739 aa15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 BRD7Q9NPI1 651 aa15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 GTF2A1LQ9UNN4 478 aa15.16■□□□□ 0.02
SHKBP1-216ENST00000598201 TRAV8-7A0A075B6U6 113 aa15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 TRBV5-7A0A0A0MS05 114 aa15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 MED19A0JLT2 244 aaPredicted RBP15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 PLA2G10O15496 165 aa15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 SRSF10O75494 262 aaKnown RBP15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 AQP8O94778 261 aa15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 ADRA2CP18825 462 aa15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 SRD5A2P31213 254 aa15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 CCR9P51686 369 aa15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 RAC1P63000 192 aa15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 CD300CQ08708 224 aa15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 ASAH1Q13510 395 aa15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 HES5Q5TA89 166 aa15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 SPINK14Q6IE38 97 aa15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 GPR148Q8TDV2 347 aa15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 PIGQQ9BRB3 760 aa15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 C11orf54Q9H0W9 315 aaPredicted RBP15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 RYDENQ9NUL5 291 aaKnown RBP15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 NCKAP5O14513 1909 aa15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 AKAP13Q12802 2813 aa15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 A0A1W2PPL8 197 aa15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 GPR171O14626 319 aa15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 TNFSF11O14788 317 aa15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 MAPK3P27361 379 aaPredicted RBP15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 LAP3P28838 519 aa15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 CDAP32320 146 aa15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 CLDN17P56750 224 aa15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 SLC25A47Q6Q0C1 308 aa15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 LRRTM1Q86UE6 522 aa15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 CATSPERDQ86XM0 798 aa15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 TMEM106AQ96A25 262 aa15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 ABRACLQ9P1F3 81 aa15.15■□□□□ 0.02
SHKBP1-216ENST00000598201 IFITM5A6NNB3 132 aa15.14■□□□□ 0.01
SHKBP1-216ENST00000598201 STMND1H3BQB6 276 aa15.14■□□□□ 0.01
SHKBP1-216ENST00000598201 PDCD5O14737 125 aa15.14■□□□□ 0.01
SHKBP1-216ENST00000598201 ZNF432O94892 652 aa15.14■□□□□ 0.01
SHKBP1-216ENST00000598201 HLA-DQB1P01920 261 aa15.14■□□□□ 0.01
SHKBP1-216ENST00000598201 CD96P40200 585 aa15.14■□□□□ 0.01
SHKBP1-216ENST00000598201 CLDN20P56880 219 aa15.14■□□□□ 0.01
SHKBP1-216ENST00000598201 HIST3H3Q16695 136 aa15.14■□□□□ 0.01
SHKBP1-216ENST00000598201 DCAF10Q5QP82 559 aa15.14■□□□□ 0.01
SHKBP1-216ENST00000598201 RAB43Q86YS6 212 aa15.14■□□□□ 0.01
SHKBP1-216ENST00000598201 LGALS14Q8TCE9 139 aa15.14■□□□□ 0.01
SHKBP1-216ENST00000598201 MCHR2Q969V1 340 aa15.14■□□□□ 0.01
SHKBP1-216ENST00000598201 KCNJ15Q99712 375 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms