RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 C5orf49A4QMS7 147 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 UNC119BA6NIH7 251 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 C17orf100A8MU93 164 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 KIAA1324LA8MWY0 1029 aaPredicted RBP9□□□□□ -0.97
CCDC9-203ENST00000596938 LYNX1G3V0Z9 82 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 IMPA2O14732 288 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 LMX1BO60663 402 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 LILRA1O75019 489 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 HPXP02790 462 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 FABP3P05413 133 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 LYNX1P0DP58 116 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 COX5BP10606 129 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 NAT2P11245 290 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 CCNOP22674 350 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 TUBG1P23258 451 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 COL8A2P25067 703 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 IFNGR2P38484 337 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 WNT5AP41221 380 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 RPS6KA3P51812 740 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 CHN2P52757 468 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 FXYD6P3P58550 94 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 ERVS71-1P61550 626 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 LSM6P62312 80 aaKnown RBP9□□□□□ -0.97
CCDC9-203ENST00000596938 MAD2L1BPQ15013 274 aaPredicted RBP9□□□□□ -0.97
CCDC9-203ENST00000596938 NKPD1Q17RQ9 610 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 RFX4Q33E94 735 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 ZNF718Q3SXZ3 478 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 TMEM154Q6P9G4 183 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 SMARCD3Q6STE5 483 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 UGT2A3Q6UWM9 527 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 THSD4Q6ZMP0 1018 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 ADCK1Q86TW2 530 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 GLB1L2Q8IW92 636 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 ARHGAP24Q8N264 748 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 MARS2Q96GW9 593 aaKnown RBP9□□□□□ -0.97
CCDC9-203ENST00000596938 C1orf159Q96HA4 380 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 NSL1Q96IY1 281 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 RSRC1Q96IZ7 334 aaKnown RBP9□□□□□ -0.97
CCDC9-203ENST00000596938 CHODLQ9H9P2 273 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 TUBG2Q9NRH3 451 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 ACTR3BQ9P1U1 418 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 LPAR3Q9UBY5 353 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 IER3IP1Q9Y5U9 82 aa9□□□□□ -0.97
CCDC9-203ENST00000596938 B2RBV5 119 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 H3BSA7 217 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 H7C1C5 153 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 DYNC1I1O14576 645 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 ARPC3O15145 178 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 SLC16A7O60669 478 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 KHDRBS3O75525 346 aaKnown RBP8.99□□□□□ -0.97
CCDC9-203ENST00000596938 KRT36O76013 467 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 FAM107AO95990 144 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 IFNA2P01563 188 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 MT-ND5P03915 603 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 FAM157CP0CG43 387 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 CTLA4P16410 223 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 ACHEP22303 614 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 FPR3P25089 353 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 GCH1P30793 250 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 LIPAP38571 399 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 CDKN2AP42771 156 aaKnown RBP8.99□□□□□ -0.97
CCDC9-203ENST00000596938 LCN6P62502 163 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 MXRA7P84157 204 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 SCRN3Q0VDG4 424 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 KRR1Q13601 381 aaKnown RBP8.99□□□□□ -0.97
CCDC9-203ENST00000596938 KCNMB1Q16558 191 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 MBNL2Q5VZF2 373 aaKnown RBP8.99□□□□□ -0.97
CCDC9-203ENST00000596938 FAM166AQ6J272 317 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 ZNF774Q6NX45 483 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 C1orf94Q6P1W5 598 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 ARL9Q6T311 187 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 ZNF101Q8IZC7 436 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 KLF14Q8TD94 323 aaPredicted RBP8.99□□□□□ -0.97
CCDC9-203ENST00000596938 SNX33Q8WV41 574 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 RASD2Q96D21 266 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 C4orf45Q96LM5 186 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 BEX2Q9BXY8 128 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 NUAK2Q9H093 628 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 RACGAP1Q9H0H5 632 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 SYT4Q9H2B2 425 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 OR51B6Q9H340 312 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 ELOVL3Q9HB03 270 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 EMC7Q9NPA0 242 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 IL20RAQ9UHF4 553 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 KLHL21Q9UJP4 597 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 NDRG4Q9ULP0 352 aaKnown RBP8.99□□□□□ -0.97
CCDC9-203ENST00000596938 TMCC3Q9ULS5 477 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 V9GYQ6 96 aa8.99□□□□□ -0.97
CCDC9-203ENST00000596938 SONP18583 2426 aaKnown RBP8.99□□□□□ -0.97
CCDC9-203ENST00000596938 LRP5LA4QPB2 252 aa8.98□□□□□ -0.97
CCDC9-203ENST00000596938 SOCS2O14508 198 aa8.98□□□□□ -0.97
CCDC9-203ENST00000596938 IDH3BO43837 385 aa8.98□□□□□ -0.97
CCDC9-203ENST00000596938 OR10H3O60404 316 aa8.98□□□□□ -0.97
CCDC9-203ENST00000596938 RP2O75695 350 aa8.98□□□□□ -0.97
CCDC9-203ENST00000596938 TGFAP01135 160 aa8.98□□□□□ -0.97
CCDC9-203ENST00000596938 NGFP01138 241 aa8.98□□□□□ -0.97
CCDC9-203ENST00000596938 CRABP1P29762 137 aa8.98□□□□□ -0.97
CCDC9-203ENST00000596938 RRM2P31350 389 aa8.98□□□□□ -0.97
CCDC9-203ENST00000596938 SLC6A6P31641 620 aa8.98□□□□□ -0.97
CCDC9-203ENST00000596938 THBS2P35442 1172 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms