RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 IGLV3-12A0A075B6K2 115 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 ARPC1BO15143 372 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 SERPINA3P01011 423 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 GLAP06280 429 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 PYCR1P32322 319 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 FAM69BQ5VUD6 431 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 C1QL3Q5VWW1 255 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 LCN10Q6JVE6 187 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 SLC25A25Q6KCM7 469 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 PXKQ7Z7A4 578 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 PPP1R3BQ86XI6 285 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 C1orf210Q8IVY1 113 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 OR5J2Q8NH18 312 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 THEM6Q8WUY1 208 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 METTL21AQ8WXB1 218 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 NAT6Q93015 286 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 CCNL2Q96S94 520 aaPredicted RBP15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 CNN2Q99439 309 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 LPAR4Q99677 370 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 ADAM19Q9H013 955 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 NOX3Q9HBY0 568 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 TAS2R3Q9NYW6 316 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 OPN4Q9UHM6 478 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 HIF3AQ9Y2N7 669 aa15.39■□□□□ 0.05
SHKBP1-205ENST00000594973 TMEM82A0PJX8 343 aa15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 C2orf72A6NCS6 295 aa15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 ARPC3O15145 178 aa15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 ALOX12BO75342 701 aa15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 S100A8P05109 93 aa15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 UBBP0CG47 229 aa15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 UBCP0CG48 685 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 SPI1P17947 270 aa15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 ACVR1BP36896 505 aa15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 CTXN1P60606 82 aa15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 RPS27AP62979 156 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 UBA52P62987 128 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 POU4F2Q12837 409 aa15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 SLC25A35Q3KQZ1 300 aa15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 TP53I3Q53FA7 332 aa15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 SVBPQ8N300 66 aa15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 C17orf47Q8NEP4 570 aa15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 OR10K1Q8NGX5 313 aa15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 DUSP19Q8WTR2 217 aa15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 GLYATL2Q8WU03 294 aa15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 C8orf44Q96CB5 159 aa15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 TSSK2Q96PF2 358 aa15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 CCDC86Q9H6F5 360 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 AKIRIN1Q9H9L7 192 aaPredicted RBP15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 BARX1Q9HBU1 254 aaPredicted RBP15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 GSN-AS1Q9NRJ2 163 aa15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 RASL12Q9NYN1 266 aa15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 CDC40O60508 579 aaKnown RBP eCLIP15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 ZNF354AO60765 605 aaPredicted RBP15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 ASAH2BP0C7U1 165 aa15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 RPA2P15927 270 aa15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 CDKN2AP42771 156 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 NRG3P56975 720 aa15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 ACTC1P68032 377 aa15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 ACTA1P68133 377 aa15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 LPAL2Q16609 132 aa15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 TMEM255AQ5JRV8 349 aa15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 DHRS7BQ6IAN0 325 aaPredicted RBP15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 ASB13Q8WXK3 278 aa15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 ZNF346Q9UL40 294 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-205ENST00000594973 A0A1W2PQD3 144 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 ANKRD61A6NGH8 418 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 SULT1C2O00338 296 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 PLPP2O43688 288 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 RAD1O60671 282 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 PGCP20142 388 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 MPGP29372 298 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 GRPRP30550 384 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 EMP2P54851 167 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 FBXW4P57775 412 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 RPL18Q07020 188 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 TRIM61Q5EBN2 209 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 OLFML2AQ68BL7 652 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 MOB3CQ70IA8 216 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 CEACAM19Q7Z692 300 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 JAZF1Q86VZ6 243 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 ARMC10Q8N2F6 343 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 LRFN5Q96NI6 719 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 PIGMQ9H3S5 423 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 RCE1Q9Y256 329 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 ALPK2Q86TB3 2170 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 DISC1C4P0D8 188 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 H7C1C5 153 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 SGCEO43556 437 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 FADS1O60427 444 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 EIF4E2O60573 245 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 GATBO75879 557 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 CD14P08571 375 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 GP1BBP13224 206 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 LCN6P62502 163 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 CBFBQ13951 182 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 FAM27D1Q5T7N8 215 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 PAPD4Q6PIY7 484 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 LRRN1Q6UXK5 716 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 OVCH1Q7RTY7 1134 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 SLC35F2Q8IXU6 374 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms