RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 CCNOP22674 350 aa15.23■□□□□ 0.03
SHKBP1-204ENST00000594862 TUBG1P23258 451 aa15.23■□□□□ 0.03
SHKBP1-204ENST00000594862 CRABP1P29762 137 aa15.23■□□□□ 0.03
SHKBP1-204ENST00000594862 LSM6P62312 80 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-204ENST00000594862 LCN6P62502 163 aa15.23■□□□□ 0.03
SHKBP1-204ENST00000594862 MRPS11P82912 194 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-204ENST00000594862 AQP6Q13520 282 aa15.23■□□□□ 0.03
SHKBP1-204ENST00000594862 TRIM25Q14258 630 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-204ENST00000594862 GGTLC2Q14390 218 aa15.23■□□□□ 0.03
SHKBP1-204ENST00000594862 RFX4Q33E94 735 aa15.23■□□□□ 0.03
SHKBP1-204ENST00000594862 UGT2A3Q6UWM9 527 aa15.23■□□□□ 0.03
SHKBP1-204ENST00000594862 ZER1Q7Z7L7 766 aa15.23■□□□□ 0.03
SHKBP1-204ENST00000594862 PAQR4Q8N4S7 273 aaPredicted RBP15.23■□□□□ 0.03
SHKBP1-204ENST00000594862 CPEB3Q8NE35 698 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-204ENST00000594862 RASD2Q96D21 266 aa15.23■□□□□ 0.03
SHKBP1-204ENST00000594862 ZNF416Q9BWM5 594 aa15.23■□□□□ 0.03
SHKBP1-204ENST00000594862 TRIM15Q9C019 465 aa15.23■□□□□ 0.03
SHKBP1-204ENST00000594862 SYT4Q9H2B2 425 aa15.23■□□□□ 0.03
SHKBP1-204ENST00000594862 ELOVL3Q9HB03 270 aa15.23■□□□□ 0.03
SHKBP1-204ENST00000594862 YAE1D1Q9NRH1 226 aa15.23■□□□□ 0.03
SHKBP1-204ENST00000594862 TUBG2Q9NRH3 451 aa15.23■□□□□ 0.03
SHKBP1-204ENST00000594862 CGGBP1Q9UFW8 167 aaPredicted RBP15.23■□□□□ 0.03
SHKBP1-204ENST00000594862 IER3IP1Q9Y5U9 82 aa15.23■□□□□ 0.03
SHKBP1-204ENST00000594862 CSPG4Q6UVK1 2322 aa15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 C5orf49A4QMS7 147 aa15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 A8MV72 311 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 SOCS2O14508 198 aa15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 ARPC3O15145 178 aa15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 IDH3BO43837 385 aa15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 CRLF1O75462 422 aa15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 CTLA4P16410 223 aa15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 ATP6V1B2P21281 511 aa15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 GCH1P30793 250 aa15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 MAGEA2P43356 314 aa15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 ARHGDIAP52565 204 aa15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 TSPAN31Q12999 210 aa15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 ENDOGQ14249 297 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 GK3PQ14409 553 aa15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 MSMPQ1L6U9 139 aa15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 FAM98BQ52LJ0 330 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 C6orf52Q5T4I8 152 aa15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 CYB5R2Q6BCY4 276 aa15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 C1orf94Q6P1W5 598 aa15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 TMEM154Q6P9G4 183 aa15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 CYP2R1Q6VVX0 501 aa15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 THSD4Q6ZMP0 1018 aa15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 JAZF1Q86VZ6 243 aa15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 NPEPL1Q8NDH3 523 aa15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 OR1J1Q8NGS3 322 aa15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 AKR7LQ8NHP1 331 aa15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 GNPDA2Q8TDQ7 276 aa15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 ASB9Q96DX5 294 aa15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 FOXN4Q96NZ1 517 aa15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 WNT5BQ9H1J7 359 aa15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 OR52D1Q9H346 318 aa15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 TPK1Q9H3S4 243 aa15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 ATPIF1Q9UII2 106 aa15.22■□□□□ 0.03
SHKBP1-204ENST00000594862 SLC16A7O60669 478 aa15.21■□□□□ 0.03
SHKBP1-204ENST00000594862 RENP00797 406 aa15.21■□□□□ 0.03
SHKBP1-204ENST00000594862 IGHV3-13P01766 116 aa15.21■□□□□ 0.03
SHKBP1-204ENST00000594862 ZNF23P17027 643 aa15.21■□□□□ 0.03
SHKBP1-204ENST00000594862 ACHEP22303 614 aa15.21■□□□□ 0.03
SHKBP1-204ENST00000594862 ALDH3B1P43353 468 aa15.21■□□□□ 0.03
SHKBP1-204ENST00000594862 GSSP48637 474 aa15.21■□□□□ 0.03
SHKBP1-204ENST00000594862 CHN2P52757 468 aa15.21■□□□□ 0.03
SHKBP1-204ENST00000594862 HMGA2P52926 109 aa15.21■□□□□ 0.03
SHKBP1-204ENST00000594862 FXYD6P3P58550 94 aa15.21■□□□□ 0.03
SHKBP1-204ENST00000594862 ZNF718Q3SXZ3 478 aa15.21■□□□□ 0.03
SHKBP1-204ENST00000594862 ZMAT1Q5H9K5 638 aa15.21■□□□□ 0.03
SHKBP1-204ENST00000594862 FAM209AQ5JX71 171 aa15.21■□□□□ 0.03
SHKBP1-204ENST00000594862 ICA1LQ8NDH6 482 aa15.21■□□□□ 0.03
SHKBP1-204ENST00000594862 OR52L1Q8NGH7 329 aa15.21■□□□□ 0.03
SHKBP1-204ENST00000594862 IPCEF1Q8WWN9 437 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-204ENST00000594862 HPS1Q92902 700 aa15.21■□□□□ 0.03
SHKBP1-204ENST00000594862 LRGUKQ96M69 825 aa15.21■□□□□ 0.03
SHKBP1-204ENST00000594862 COG8Q96MW5 612 aa15.21■□□□□ 0.03
SHKBP1-204ENST00000594862 ERMAPQ96PL5 475 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-204ENST00000594862 IFT27Q9BW83 186 aa15.21■□□□□ 0.03
SHKBP1-204ENST00000594862 BPESC1Q9GZL8 116 aa15.21■□□□□ 0.03
SHKBP1-204ENST00000594862 OR51B6Q9H340 312 aa15.21■□□□□ 0.03
SHKBP1-204ENST00000594862 HINT3Q9NQE9 182 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-204ENST00000594862 CYSLTR2Q9NS75 346 aa15.21■□□□□ 0.03
SHKBP1-204ENST00000594862 TMEM160Q9NX00 188 aa15.21■□□□□ 0.03
SHKBP1-204ENST00000594862 NKIRAS2Q9NYR9 191 aa15.21■□□□□ 0.03
SHKBP1-204ENST00000594862 TAAR3PQ9P1P4 343 aa15.21■□□□□ 0.03
SHKBP1-204ENST00000594862 LOC100509620A0A075B734 347 aa15.2■□□□□ 0.02
SHKBP1-204ENST00000594862 TNFRSF11BO00300 401 aa15.2■□□□□ 0.02
SHKBP1-204ENST00000594862 SGCEO43556 437 aa15.2■□□□□ 0.02
SHKBP1-204ENST00000594862 DOK2O60496 412 aa15.2■□□□□ 0.02
SHKBP1-204ENST00000594862 PPP1R3DO95685 299 aa15.2■□□□□ 0.02
SHKBP1-204ENST00000594862 IGFBP1P08833 259 aaPredicted RBP15.2■□□□□ 0.02
SHKBP1-204ENST00000594862 NOS3P29474 1203 aa15.2■□□□□ 0.02
SHKBP1-204ENST00000594862 LIPAP38571 399 aa15.2■□□□□ 0.02
SHKBP1-204ENST00000594862 KCNMB1Q16558 191 aa15.2■□□□□ 0.02
SHKBP1-204ENST00000594862 ZNF620Q6ZNG0 422 aa15.2■□□□□ 0.02
SHKBP1-204ENST00000594862 LRP11Q86VZ4 500 aa15.2■□□□□ 0.02
SHKBP1-204ENST00000594862 ZCCHC24Q8N2G6 241 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-204ENST00000594862 RDH5Q92781 318 aa15.2■□□□□ 0.02
SHKBP1-204ENST00000594862 GPA33Q99795 319 aa15.2■□□□□ 0.02
SHKBP1-204ENST00000594862 CHODLQ9H9P2 273 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms