RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 TVP23BQ9NYZ1 205 aa12.97□□□□□ -0.33
DDX39A-221ENST00000593026 TIMM10BQ9Y5J6 103 aa12.97□□□□□ -0.33
DDX39A-221ENST00000593026 ABCA4P78363 2273 aa12.97□□□□□ -0.33
DDX39A-221ENST00000593026 HRNRQ86YZ3 2850 aaPredicted RBP12.97□□□□□ -0.33
DDX39A-221ENST00000593026 CACNA1DQ01668 2161 aa12.96□□□□□ -0.33
DDX39A-221ENST00000593026 HS3ST1O14792 307 aa12.96□□□□□ -0.33
DDX39A-221ENST00000593026 PTHP01270 115 aa12.96□□□□□ -0.33
DDX39A-221ENST00000593026 TFP02787 698 aa12.96□□□□□ -0.33
DDX39A-221ENST00000593026 GYPBP06028 91 aa12.96□□□□□ -0.33
DDX39A-221ENST00000593026 CLUP10909 449 aa12.96□□□□□ -0.33
DDX39A-221ENST00000593026 POLR2IP36954 125 aaKnown RBP12.96□□□□□ -0.33
DDX39A-221ENST00000593026 CDH11P55287 796 aa12.96□□□□□ -0.33
DDX39A-221ENST00000593026 SCRN3Q0VDG4 424 aa12.96□□□□□ -0.33
DDX39A-221ENST00000593026 TRIP10Q15642 601 aa12.96□□□□□ -0.33
DDX39A-221ENST00000593026 MEP1BQ16820 701 aa12.96□□□□□ -0.33
DDX39A-221ENST00000593026 ZNF672Q499Z4 452 aaPredicted RBP12.96□□□□□ -0.33
DDX39A-221ENST00000593026 PABPC1L2AQ5JQF8 200 aa12.96□□□□□ -0.33
DDX39A-221ENST00000593026 C12orf73Q69YU5 71 aa12.96□□□□□ -0.33
DDX39A-221ENST00000593026 PLBD1Q6P4A8 553 aa12.96□□□□□ -0.33
DDX39A-221ENST00000593026 ZNF771Q7L3S4 317 aaPredicted RBP12.96□□□□□ -0.33
DDX39A-221ENST00000593026 ZNF584Q8IVC4 421 aa12.96□□□□□ -0.33
DDX39A-221ENST00000593026 OR51L1Q8NGJ5 315 aa12.96□□□□□ -0.33
DDX39A-221ENST00000593026 LILRB1Q8NHL6 650 aaPredicted RBP12.96□□□□□ -0.33
DDX39A-221ENST00000593026 NRGNQ92686 78 aa12.96□□□□□ -0.33
DDX39A-221ENST00000593026 HCAR1Q9BXC0 346 aa12.96□□□□□ -0.33
DDX39A-221ENST00000593026 OR2H1Q9GZK4 316 aa12.96□□□□□ -0.33
DDX39A-221ENST00000593026 ASH2LQ9UBL3 628 aa12.96□□□□□ -0.33
DDX39A-221ENST00000593026 ATP23Q9Y6H3 246 aa12.96□□□□□ -0.33
DDX39A-221ENST00000593026 ABCA12Q86UK0 2595 aa12.95□□□□□ -0.34
DDX39A-221ENST00000593026 IGHV2OR16-5A0A0B4J2B6 119 aa12.95□□□□□ -0.34
DDX39A-221ENST00000593026 H0YHG0 523 aa12.95□□□□□ -0.34
DDX39A-221ENST00000593026 CALCRP30988 508 aa12.95□□□□□ -0.34
DDX39A-221ENST00000593026 FMO3P31513 532 aa12.95□□□□□ -0.34
DDX39A-221ENST00000593026 BLVRAP53004 296 aa12.95□□□□□ -0.34
DDX39A-221ENST00000593026 PSG4Q00888 419 aa12.95□□□□□ -0.34
DDX39A-221ENST00000593026 TEKQ02763 1124 aa12.95□□□□□ -0.34
DDX39A-221ENST00000593026 CPOQ8IVL8 374 aa12.95□□□□□ -0.34
DDX39A-221ENST00000593026 ALDH16A1Q8IZ83 802 aa12.95□□□□□ -0.34
DDX39A-221ENST00000593026 SLC30A7Q8NEW0 376 aa12.95□□□□□ -0.34
DDX39A-221ENST00000593026 OR6K6Q8NGW6 343 aa12.95□□□□□ -0.34
DDX39A-221ENST00000593026 AKR7LQ8NHP1 331 aa12.95□□□□□ -0.34
DDX39A-221ENST00000593026 ZNRF4Q8WWF5 429 aa12.95□□□□□ -0.34
DDX39A-221ENST00000593026 NEUROG1Q92886 237 aa12.95□□□□□ -0.34
DDX39A-221ENST00000593026 PTP4A1Q93096 173 aa12.95□□□□□ -0.34
DDX39A-221ENST00000593026 FBXW5Q969U6 566 aa12.95□□□□□ -0.34
DDX39A-221ENST00000593026 SLC29A1Q99808 456 aa12.95□□□□□ -0.34
DDX39A-221ENST00000593026 WNT5BQ9H1J7 359 aa12.95□□□□□ -0.34
DDX39A-221ENST00000593026 OR51V1Q9H2C8 321 aa12.95□□□□□ -0.34
DDX39A-221ENST00000593026 DCLRE1BQ9H816 532 aa12.95□□□□□ -0.34
DDX39A-221ENST00000593026 HINT3Q9NQE9 182 aaKnown RBP12.95□□□□□ -0.34
DDX39A-221ENST00000593026 CISD1Q9NZ45 108 aaKnown RBP12.95□□□□□ -0.34
DDX39A-221ENST00000593026 EDARQ9UNE0 448 aa12.95□□□□□ -0.34
DDX39A-221ENST00000593026 APCP25054 2843 aa12.95□□□□□ -0.34
DDX39A-221ENST00000593026 TVP23AA6NH52 213 aa12.94□□□□□ -0.34
DDX39A-221ENST00000593026 SGCEO43556 437 aa12.94□□□□□ -0.34
DDX39A-221ENST00000593026 DOK2O60496 412 aa12.94□□□□□ -0.34
DDX39A-221ENST00000593026 ZNF823P16415 610 aa12.94□□□□□ -0.34
DDX39A-221ENST00000593026 APEX1P27695 318 aaKnown RBP12.94□□□□□ -0.34
DDX39A-221ENST00000593026 APLNRP35414 380 aa12.94□□□□□ -0.34
DDX39A-221ENST00000593026 ADAM8P78325 824 aa12.94□□□□□ -0.34
DDX39A-221ENST00000593026 LRRC36Q1X8D7 754 aa12.94□□□□□ -0.34
DDX39A-221ENST00000593026 TBC1D28Q2M2D7 210 aa12.94□□□□□ -0.34
DDX39A-221ENST00000593026 ZIK1Q3SY52 487 aaPredicted RBP12.94□□□□□ -0.34
DDX39A-221ENST00000593026 KLHL12Q53G59 568 aa12.94□□□□□ -0.34
DDX39A-221ENST00000593026 ZNF774Q6NX45 483 aa12.94□□□□□ -0.34
DDX39A-221ENST00000593026 B3GLCTQ6Y288 498 aa12.94□□□□□ -0.34
DDX39A-221ENST00000593026 C20orf204Q6ZNR8 217 aa12.94□□□□□ -0.34
DDX39A-221ENST00000593026 CXXC5Q7LFL8 322 aaKnown RBP12.94□□□□□ -0.34
DDX39A-221ENST00000593026 ZNF611Q8N823 705 aa12.94□□□□□ -0.34
DDX39A-221ENST00000593026 CPEB3Q8NE35 698 aaKnown RBP12.94□□□□□ -0.34
DDX39A-221ENST00000593026 OR4F15Q8NGB8 312 aa12.94□□□□□ -0.34
DDX39A-221ENST00000593026 OR1J2Q8NGS2 313 aa12.94□□□□□ -0.34
DDX39A-221ENST00000593026 CDADC1Q9BWV3 514 aa12.94□□□□□ -0.34
DDX39A-221ENST00000593026 LIME1Q9H400 295 aa12.94□□□□□ -0.34
DDX39A-221ENST00000593026 CDH20Q9HBT6 801 aa12.94□□□□□ -0.34
DDX39A-221ENST00000593026 MRPL22Q9NWU5 206 aaKnown RBP12.94□□□□□ -0.34
DDX39A-221ENST00000593026 KCNG2Q9UJ96 466 aa12.94□□□□□ -0.34
DDX39A-221ENST00000593026 LHFPL6Q9Y693 200 aa12.94□□□□□ -0.34
DDX39A-221ENST00000593026 COMMD3-BMI1R4GMX3 469 aa12.94□□□□□ -0.34
DDX39A-221ENST00000593026 CADP27708 2225 aa12.94□□□□□ -0.34
DDX39A-221ENST00000593026 E7EQL1 145 aa12.93□□□□□ -0.34
DDX39A-221ENST00000593026 M0R129 80 aa12.93□□□□□ -0.34
DDX39A-221ENST00000593026 PRODHO43272 600 aa12.93□□□□□ -0.34
DDX39A-221ENST00000593026 PRKYO43930 277 aa12.93□□□□□ -0.34
DDX39A-221ENST00000593026 GLCEO94923 617 aa12.93□□□□□ -0.34
DDX39A-221ENST00000593026 CCL2P13500 99 aa12.93□□□□□ -0.34
DDX39A-221ENST00000593026 ZNF35P13682 527 aa12.93□□□□□ -0.34
DDX39A-221ENST00000593026 STOMP27105 288 aa12.93□□□□□ -0.34
DDX39A-221ENST00000593026 PEX2P28328 305 aa12.93□□□□□ -0.34
DDX39A-221ENST00000593026 RPS7P62081 194 aaKnown RBP12.93□□□□□ -0.34
DDX39A-221ENST00000593026 GALK2Q01415 458 aa12.93□□□□□ -0.34
DDX39A-221ENST00000593026 LINC01590Q5TEZ4 76 aa12.93□□□□□ -0.34
DDX39A-221ENST00000593026 LPCAT4Q643R3 524 aa12.93□□□□□ -0.34
DDX39A-221ENST00000593026 LYPD4Q6UWN0 246 aa12.93□□□□□ -0.34
DDX39A-221ENST00000593026 PAMR1Q6UXH9 720 aa12.93□□□□□ -0.34
DDX39A-221ENST00000593026 LINC00346Q8IVM7 164 aa12.93□□□□□ -0.34
DDX39A-221ENST00000593026 TCEANCQ8N8B7 351 aa12.93□□□□□ -0.34
DDX39A-221ENST00000593026 ZNF511Q8NB15 262 aa12.93□□□□□ -0.34
DDX39A-221ENST00000593026 BBS1Q8NFJ9 593 aa12.93□□□□□ -0.34
DDX39A-221ENST00000593026 GJC3Q8NFK1 279 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms